Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002120 Camellia sinensis var. sinensis HOM05D004805 ORTHO05D005756 9.5e-144 513.5 253 100.0
Actinidia30402 Actinidia chinensis HOM05D004805 ORTHO05D005756 1.1e-120 436.8 253 84.6
Rhsim06G0229900 Rhododendron simsii HOM05D004805 ORTHO05D005756 3.1e-118 428.7 254 82.3
Actinidia05003 Actinidia chinensis HOM05D004805 ORTHO05D005756 1.7e-116 422.9 250 82.0
Dinv10336 Davidia involucrata HOM05D004805 ORTHO05D005756 3.8e-116 421.8 249 81.1
TAR626G0989 Trochodendron aralioides HOM05D004805 ORTHO05D005756 4.9e-108 394.8 249 77.1
CiPaw.12G138400 Carya illinoinensis HOM05D004805 ORTHO05D005756 5.1e-105 384.8 248 72.2
Cfa020188 Carpinus fangiana HOM05D004805 ORTHO05D005756 1.1e-104 383.6 247 72.1
TPR.G8592 Trifolium pratense HOM05D004805 ORTHO05D005756 3.3e-104 382.1 246 71.1
Nn1g07520 Nelumbo nucifera HOM05D004805 ORTHO05D005756 1.6e-103 379.8 247 74.1
Cc00_g18290 Coffea canephora HOM05D004805 ORTHO05D005756 2.8e-103 379.0 239 73.6
Haze_09828 Corylus avellana HOM05D004805 ORTHO05D005756 2.8e-103 379.0 245 71.4
Glyma.17G150300 Glycine max HOM05D004805 ORTHO05D005756 1.4e-102 376.7 245 70.2
Glyma.14G013400 Glycine max HOM05D004805 ORTHO05D005756 2.4e-102 375.9 245 70.6
Medtr5g095960 Medicago truncatula HOM05D004805 ORTHO05D005756 3.1e-102 375.6 246 69.5
Psat2g007280 Pisum sativum HOM05D004805 ORTHO05D005756 1.5e-101 373.2 246 67.9
vmacro11591 Vaccinium macrocarpon HOM05D004805 ORTHO05D005756 1.5e-101 373.2 265 72.5
Lj1C890G11 Lonicera japonica HOM05D004805 ORTHO05D005756 2.6e-101 372.5 246 73.6
LjContig00081g0004731 Lotus japonicus HOM05D004805 ORTHO05D005756 2.6e-101 372.5 246 70.3
DCAR_013232 Daucus carota HOM05D004805 ORTHO05D005756 4.5e-101 371.7 243 73.3
Peaxi162Scf00139g01316 Petunia axillaris HOM05D004805 ORTHO05D005756 4.5e-101 371.7 244 72.5
Lj1g0004670 Lotus japonicus HOM05D004805 ORTHO05D005756 7.6e-101 370.9 246 68.7
Ca_06397_v3 Cicer arietinum L. HOM05D004805 ORTHO05D005756 1.0e-100 370.5 246 68.3
Atru.chr9.1539 Acer truncatum HOM05D004805 ORTHO05D005756 4.9e-100 368.2 246 70.7
Aqoxy4G03118 Aquilegia oxysepala HOM05D004805 ORTHO05D005756 8.4e-100 367.5 248 71.4
CAN.G623.13 Capsicum annuum HOM05D004805 ORTHO05D005756 8.4e-100 367.5 246 71.1
Atru.chr13.2016 Acer truncatum HOM05D004805 ORTHO05D005756 1.9e-99 366.3 249 69.5
Phvul.008G279200 Phaseolus vulgaris HOM05D004805 ORTHO05D005756 1.9e-99 366.3 246 67.9
GSVIVG01014691001 Vitis vinifera HOM05D004805 ORTHO05D005756 1.9e-99 366.3 247 71.7
Sopen07g033800 Solanum pennellii HOM05D004805 ORTHO05D005756 3.2e-99 365.5 247 69.6
FvH4_3g11630 Fragaria vesca HOM05D004805 ORTHO05D005756 4.2e-99 365.2 246 70.3
RcHm_v2.0_Chr5g0018651 Rosa chinensis HOM05D004805 ORTHO05D005756 4.2e-99 365.2 246 71.1
RcHm_v2.0_Chr7g0241681 Rosa chinensis HOM05D004805 ORTHO05D005756 4.2e-99 365.2 246 71.1
FAN16G0962 Fragaria x ananassa HOM05D004805 ORTHO05D005756 9.3e-99 364.0 246 70.7
Lalb_Chr09g0322761 Lupinus albus HOM05D004805 ORTHO05D005756 1.2e-98 363.6 247 68.4
FAN25G0449 Fragaria x ananassa HOM05D004805 ORTHO05D005756 2.1e-98 362.8 246 70.3
MD05G1261800 Malus domestica HOM05D004805 ORTHO05D005756 2.7e-98 362.5 246 69.9
Prupe.3G149500 Prunus persica HOM05D004805 ORTHO05D005756 2.7e-98 362.5 246 70.3
Ciclev10009329m.g Citrus clementina HOM05D004805 ORTHO05D005756 3.5e-98 362.1 246 70.7
Solyc07g065590.4 Solanum lycopersicum HOM05D004805 ORTHO05D005756 7.9e-98 360.9 248 69.8
arahy.Tifrunner.gnm1.ann1.KL44N8 Arachis hypogaea HOM05D004805 ORTHO05D005756 1.3e-97 360.1 244 68.4
CsaV3_3G004240 Cucumis sativus L. HOM05D004805 ORTHO05D005756 3.9e-97 358.6 246 68.3
Duzib268G0855 Durio zibethinus HOM05D004805 ORTHO05D005756 3.9e-97 358.6 246 69.5
arahy.Tifrunner.gnm1.ann1.1A96RS Arachis hypogaea HOM05D004805 ORTHO05D005756 6.7e-97 357.8 244 69.3
PSO832G0973 Papaver somniferum HOM05D004805 ORTHO05D005756 1.1e-96 357.1 249 68.3
PSO063G7513 Papaver somniferum HOM05D004805 ORTHO05D005756 2.5e-96 355.9 246 66.7
ECA234G3028 Erigeron canadensis HOM05D004805 ORTHO05D005756 5.7e-96 354.8 250 68.4
Gorai.004G033700 Gossypium raimondii HOM05D004805 ORTHO05D005756 5.7e-96 354.8 244 69.7
Aa31LG3G11710 Aethionema arabicum HOM05D004805 ORTHO05D005756 1.6e-95 353.2 245 66.9
SalBow4G0417 Salvia bowleyana HOM05D004805 ORTHO05D005756 2.1e-95 352.8 275 62.9
HanXRQChr03g0074031 Helianthus annuus HOM05D004805 ORTHO05D005756 2.8e-95 352.4 243 69.5
Sed0016007 Sechium edule HOM05D004805 ORTHO05D005756 2.8e-95 352.4 248 68.1
SGA_v2.0_scaffold44G16806 Striga asiatica HOM05D001081 ORTHO05D003320 3.7e-95 352.1 245 67.8
ClCG10G004450 Citrullus lanatus HOM05D004805 ORTHO05D005756 1.1e-94 350.5 246 67.5
Eucgr.F03688 Eucalyptus grandis HOM05D004805 ORTHO05D005756 1.8e-94 349.7 247 68.8
Lsat_1_v5_gn_9_89740 Lactuca sativa HOM05D004805 ORTHO05D005756 3.1e-94 349.0 243 68.3
PGSC0003DMG400022170 Solanum tuberosum HOM05D004805 ORTHO05D005756 4.1e-94 348.6 229 72.1
MSTRG.27026 Avicennia marina HOM05D004805 ORTHO05D005756 1.5e-93 346.7 247 65.6
PGR142G3095 Punica granatum HOM05D004805 ORTHO05D005756 1.5e-93 346.7 247 68.0
MELO3C014119.2 Cucumis melo HOM05D004805 ORTHO05D005756 2.6e-93 345.9 285 60.7
THA.LOC104811668 Tarenaya hassleriana HOM05D004805 ORTHO05D005756 7.6e-93 344.4 244 66.0
CANSAT11G2385 Cannabis sativa HOM05D004805 ORTHO05D005756 1.0e-92 344.0 247 65.6
BcaB01g04372 Brassica carinata HOM05D004805 ORTHO05D005756 1.3e-92 343.6 247 66.0
AL8G31370 Arabidopsis lyrata HOM05D004805 ORTHO05D005756 3.2e-91 339.0 247 65.2
Carub.0008s1616 Capsella rubella HOM05D004805 ORTHO05D005756 5.5e-91 338.2 247 64.0
Hma1.2p1_1402F.1_g281100 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 5.5e-91 338.2 216 76.9
BcaC01g06393 Brassica carinata HOM05D004805 ORTHO05D005756 2.7e-90 335.9 247 64.4
Carub.0005s0937 Capsella rubella HOM05D004805 ORTHO05D005756 3.6e-90 335.5 246 66.3
Carub.0005s0950 Capsella rubella HOM05D004805 ORTHO05D005756 7.9e-90 334.3 246 65.9
Manes.03G141600 Manihot esculenta HOM05D004805 ORTHO05D005756 1.8e-89 333.2 246 65.0
AT5G55810 Arabidopsis thaliana HOM05D004805 ORTHO05D005756 2.3e-89 332.8 247 63.2
QL08p004083 Quercus lobata HOM05D004805 ORTHO05D005756 3.0e-89 332.4 203 74.9
BcaB08g35939 Brassica carinata HOM05D004805 ORTHO05D005756 8.7e-89 330.9 243 64.6
BcaC04g20199 Brassica carinata HOM05D004805 ORTHO05D005756 1.9e-88 329.7 245 62.9
CARHR269130 Cardamine hirsuta HOM05D004805 ORTHO05D005756 3.3e-88 328.9 247 63.6
Sp6g17690 Schrenkiella parvula HOM05D004805 ORTHO05D005756 4.3e-88 328.6 245 63.3
EL10Ac1g00341 Beta vulgaris HOM05D004805 ORTHO05D005756 1.6e-87 326.6 246 65.0
Potri.013G021900 Populus trichocarpa HOM05D004805 ORTHO05D005756 6.3e-87 324.7 241 64.7
Duzib213G0036 Durio zibethinus HOM05D004805 ORTHO05D005756 4.1e-86 322.0 245 64.1
MD10G1240100 Malus domestica HOM05D004805 ORTHO05D005756 6.9e-86 321.2 202 74.8
Potri.005G032300 Populus trichocarpa HOM05D004805 ORTHO05D005756 9.1e-86 320.9 243 64.6
ATR0090G032 Amborella trichopoda HOM05D004805 ORTHO05D005756 1.5e-85 320.1 226 69.5
HPP92_025829 Vanilla planifolia HOM05D004805 ORTHO05D005756 1.5e-85 320.1 244 63.1
Gohir.A08G025200 Gossypium hirsutum HOM05D004805 ORTHO05D005756 1.0e-84 317.4 245 63.7
TWI38G2348 Tripterygium wilfordii HOM05D004805 ORTHO05D005756 1.0e-84 317.4 202 73.3
Sabra05G0034900 Salix brachista HOM05D004805 ORTHO05D005756 2.9e-84 315.8 243 62.6
Gohir.D08G035700 Gossypium hirsutum HOM05D004805 ORTHO05D005756 1.1e-83 313.9 244 63.5
Nitab4.5_0002736g0040 Nicotiana tabacum HOM05D004805 ORTHO05D005756 1.1e-83 313.9 192 75.5
Zm00001eb191530 Zea mays HOM05D004805 ORTHO05D005756 1.6e-82 310.1 230 63.9
Nitab4.5_0007415g0050 Nicotiana tabacum HOM05D004805 ORTHO05D005756 6.1e-82 308.1 203 72.4
VMungo0647G2576 Vigna mungo HOM05D004805 ORTHO05D005756 6.1e-82 308.1 195 71.3
Medtr3g007850 Medicago truncatula HOM05D004805 ORTHO05D005756 1.8e-78 296.6 194 69.1
A03p13810 Brassica napus HOM05D004805 ORTHO05D005756 2.4e-78 296.2 216 63.4
Hund27237 Selenicereus undatus HOM05D004805 ORTHO05D005756 3.1e-78 295.8 224 64.7
AUR62022629 Chenopodium quinoa HOM05D004805 ORTHO05D005756 5.3e-78 295.0 243 61.3
Sc16g0008090 Simmondsia chinensis HOM05D004805 ORTHO05D005756 9.1e-78 294.3 244 59.4
C03p16250 Brassica napus HOM05D004805 ORTHO05D005756 2.6e-77 292.7 216 63.9
A10p13030 Brassica napus HOM05D004805 ORTHO05D005756 9.4e-75 284.3 217 61.8
C09p46750 Brassica napus HOM05D004805 ORTHO05D005756 3.6e-74 282.3 217 61.3
BolC9t57526H Brassica oleracea HOM05D004805 ORTHO05D005756 3.6e-74 282.3 217 61.3
BraA10t43397Z Brassica rapa HOM05D004805 ORTHO05D005756 3.6e-74 282.3 217 61.3
Thecc.07G013300 Theobroma cacao HOM05D004805 ORTHO05D005756 6.1e-74 281.6 177 73.4
Lsat_1_v5_gn_4_137701 Lactuca sativa HOM05D004805 ORTHO05D005756 2.8e-71 272.7 196 67.9
CAN.G849.12 Capsicum annuum HOM05D004805 ORTHO05D005756 8.2e-71 271.2 188 67.6
SGA_v2.0_scaffold192G40544 Striga asiatica HOM05D001081 ORTHO05D003320 1.1e-70 270.8 232 59.9
AagrBONN_evm.TU.Sc2ySwM_362.484 Anthoceros agrestis HOM05D004805 ORTHO05D005756 1.8e-70 270.0 243 54.7
Mapoly0011s0011 Marchantia polymorpha HOM05D004805 ORTHO05D005756 5.3e-70 268.5 243 55.6
Pp3c20_23380 Physcomitrium patens HOM05D004805 ORTHO05D005756 2.2e-68 263.1 249 52.2
Pp3c10_25720 Physcomitrium patens HOM05D004805 ORTHO05D005756 3.8e-68 262.3 247 51.0
Migut.F01027 Erythranthe guttata HOM05D004805 ORTHO05D005756 1.1e-67 260.8 242 56.2
AUR62004423 Chenopodium quinoa HOM05D004805 ORTHO05D005756 9.4e-67 257.7 170 71.2
Pp3c3_17230 Physcomitrium patens HOM05D004805 ORTHO05D005756 9.4e-67 257.7 245 51.0
Hma1.2p1_1516F.1_g288260 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 2.1e-66 256.5 199 66.8
Prupe.4G103800 Prunus persica HOM05D004805 ORTHO05D005756 2.7e-66 256.1 246 54.1
Rhsim04G0012600 Rhododendron simsii HOM05D004805 ORTHO05D005756 4.8e-63 245.4 166 74.7
AagrBONN_evm.TU.Sc2ySwM_228.3487 Anthoceros agrestis HOM05D004805 ORTHO05D005756 2.4e-62 243.0 200 58.0
TAR624G1110 Trochodendron aralioides HOM05D004805 ORTHO05D005756 9.1e-62 241.1 196 63.3
FAN21G3052 Fragaria x ananassa HOM05D004805 ORTHO05D005756 1.2e-61 240.7 220 56.8
CARHR269180 Cardamine hirsuta HOM05D004805 ORTHO05D005756 1.9e-59 233.4 167 64.1
Pp3c13_13680 Physcomitrium patens HOM05D004805 ORTHO05D005756 3.2e-59 232.6 245 46.5
Glyma.19G097900 Glycine max HOM05D004805 ORTHO05D005756 5.5e-59 231.9 144 75.0
Lj3g0007860 Lotus japonicus HOM05D004805 ORTHO05D005756 2.7e-58 229.6 244 54.1
CBR_g34363 Chara braunii HOM05D000019 ORTHO05D000002 3.6e-58 229.2 213 52.1
AagrBONN_evm.TU.Sc2ySwM_344.1047 Anthoceros agrestis HOM05D004805 ORTHO05D005756 6.8e-57 224.9 185 58.4
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 1.7e-55 220.3 172 64.5
Ah.05g180060 Amaranthus hybridus HOM05D004805 ORTHO05D005756 2.2e-55 219.9 182 58.2
SMO364G0361 Selaginella moellendorffii HOM05D004805 ORTHO05D005756 1.3e-52 210.7 214 48.1
BraA03t10684Z Brassica rapa HOM05D004805 ORTHO05D005756 2.3e-52 209.9 232 49.6
AagrBONN_evm.TU.Sc2ySwM_344.1045 Anthoceros agrestis HOM05D004805 ORTHO05D005756 2.8e-50 203.0 202 52.5
BolC3t14047H Brassica oleracea HOM05D004805 ORTHO05D005756 1.8e-46 190.3 239 46.0
Os02g0814900 Oryza sativa ssp. japonica HOM05D004805 ORTHO05D005756 4.1e-46 189.1 194 50.0
Cpa.g.sc26.30 Carica papaya HOM05D004805 ORTHO05D005756 2.7e-45 186.4 108 80.6
COL.COLO4_09836 Corchorus olitorius HOM05D004805 ORTHO05D005756 3.5e-45 186.0 133 67.7
Thhalv10015421m.g Eutrema salsugineum HOM05D004805 ORTHO05D005756 1.7e-44 183.7 194 50.0
ECA240G4670 Erigeron canadensis HOM05D004805 ORTHO05D005756 4.7e-42 175.6 109 75.2
PRCOL_00003123 Prasinoderma coloniale HOM05D004805 ORTHO05D005756 2.9e-39 166.4 221 41.6
Os09g0347900 Oryza sativa ssp. japonica HOM05D004805 ORTHO05D005756 2.0e-37 160.2 105 66.7
unitig_0.g252 Utricularia gibba HOM05D004805 ORTHO05D005756 2.0e-37 160.2 104 70.2
Glyma.02G300600 Glycine max HOM05D004805 ORTHO05D005756 6.6e-36 155.2 105 70.5
QL08p004070 Quercus lobata HOM05D000031 ORTHO05D005756 2.5e-35 153.3 250 40.4
Hma1.2p1_0226F.1_g095340 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 4.0e-33 146.0 159 52.8
PSO170G0902 Papaver somniferum HOM05D004805 ORTHO05D005756 3.2e-30 136.3 103 60.2
SEGI_22417 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 8.3e-23 111.7 101 54.5
Cfa025186 Carpinus fangiana HOM05D004805 ORTHO05D005756 2.7e-21 106.7 161 35.4
ECA234G1395 Erigeron canadensis HOM05D004805 ORTHO05D005756 1.2e-18 97.8 66 72.7
Oeu037059.1 Olea europaea HOM05D004805 ORTHO05D005756 5.2e-17 92.4 65 66.2
CBR_g34381 Chara braunii HOM05D000019 ORTHO05D000048 2.7e-13 80.1 81 48.1
FAN24G2452 Fragaria x ananassa HOM05D004805 ORTHO05D005756 3.5e-13 79.7 55 63.6
SEGI_01519 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 5.1e-12 75.9 69 53.6
FAN16G1285 Fragaria x ananassa HOM05D004805 ORTHO05D005756 3.1e-09 66.6 44 65.9
Cre14.g626950 Chlamydomonas reinhardtii HOM05D004805 ORTHO05D005756 6.9e-09 65.5 107 34.6
FAN14G1154 Fragaria x ananassa HOM05D004805 ORTHO05D005756 1.9e-06 57.4 79 40.5


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