Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002114 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 7.8e-309 1063.1 612 100.0
CSS0038750 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.6e-291 1003.8 612 95.4
CSS0018878 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.8e-290 1000.7 612 95.6
CSS0026285 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.4e-289 998.4 612 94.9
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.0e-284 983.0 632 92.2
CSS0029919 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.9e-283 978.8 613 94.3
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.4e-280 968.0 632 90.8
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.4e-280 968.0 632 90.8
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.4e-280 968.0 632 90.8
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.8e-280 967.2 632 90.8
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-279 965.7 632 90.7
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-279 965.7 632 90.7
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.2e-278 961.1 632 90.2
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.0e-276 954.9 632 90.0
CSS0006218 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.0e-191 674.1 347 97.1
CSS0023104 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-190 670.6 347 96.5
CSS0006283 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.6e-190 668.3 347 95.7
CSS0018155 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 9.5e-190 667.5 347 95.7
CSS0034950 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 9.5e-190 667.5 347 95.7
CSS0040322 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 9.5e-190 667.5 347 95.7
CSS0046417 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 9.5e-190 667.5 347 95.7
CSS0011419 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.6e-72 278.1 167 77.2
CSS0044385 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 7.8e-59 232.6 135 87.4
CSS0007197 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.1e-50 203.4 410 33.7
CSS0011758 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.5e-49 201.8 393 34.9
CSS0000071 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.3e-49 200.7 410 33.4
CSS0014159 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.3e-47 193.4 410 32.7
CSS0044892 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.0e-46 191.4 410 32.4
CSS0010049 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-45 188.3 410 32.2
CSS0046859 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.8e-45 187.2 396 33.3
CSS0049789 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 8.4e-45 186.0 410 32.4
CSS0048122 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.6e-43 180.3 403 31.5
Dinv02273 Davidia involucrata HOM05D008484 ORTHO05D007523 9.0e-39 166.0 377 31.0
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 9.7e-33 146.0 423 30.3
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.0e-29 136.0 424 29.0
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 1.2e-27 129.0 475 29.3
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 4.6e-27 127.1 395 29.9
CSS0039395 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.1e-27 126.7 463 27.6
CSS0030799 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 7.9e-27 126.3 463 27.4
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-25 122.5 419 28.6
CSS0050301 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 9.7e-25 119.4 348 26.7
Rhsim06G0054100 Rhododendron simsii HOM05D017774 ORTHO05D013099 1.3e-24 119.0 397 28.0
TWI14G1239 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 1.3e-24 119.0 479 26.3
TWI23G0081 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 1.3e-24 119.0 479 26.3
Dinv07248 Davidia involucrata HOM05D008484 ORTHO05D007523 1.7e-24 118.6 191 33.5
CSS0012098 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 2.2e-24 118.2 350 27.4
Rhsim03G0108200 Rhododendron simsii HOM05D008484 ORTHO05D007523 2.2e-24 118.2 376 30.9
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.8e-23 115.2 346 24.9
TWI59G0944 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 3.1e-23 114.4 463 24.2
CSS0000781 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 9.1e-23 112.8 348 26.7
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.2e-22 112.5 226 31.4
CSS0009580 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 2.0e-22 111.7 348 26.4
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 2.6e-22 111.3 346 24.3
CSS0001042 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.5e-22 110.5 154 40.9
CSS0008852 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 1.3e-21 109.0 342 24.6
Dinv07454 Davidia involucrata HOM05D008484 ORTHO05D007523 6.5e-21 106.7 172 36.0
CSS0029864 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 4.2e-20 104.0 234 29.5
CSS0030886 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 1.6e-19 102.1 236 30.1
CSS0050518 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 3.6e-19 100.9 229 30.1
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.0e-17 95.1 332 28.3
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.4e-17 94.0 332 28.0
CSS0030123 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.4e-17 94.0 375 26.1
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 7.4e-17 93.2 336 24.4
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-16 92.4 226 30.1
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-16 92.4 226 30.1
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-16 92.4 226 30.1
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.2e-16 91.7 360 29.4
CSS0018852 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 2.8e-16 91.3 217 28.6
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.8e-16 90.5 333 27.0
CSS0038166 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 8.2e-16 89.7 250 28.0
CSS0020586 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.1e-15 89.4 376 26.9
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-15 89.4 360 29.4
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.8e-15 88.6 502 23.3
vmacro19839 Vaccinium macrocarpon HOM05D008484 ORTHO05D007523 1.8e-15 88.6 231 29.9
CSS0040996 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 2.4e-15 88.2 327 24.8
Rhsim01G0158000 Rhododendron simsii HOM05D017361 ORTHO05D007523 2.4e-15 88.2 140 36.4
RhsimUnG0058200 Rhododendron simsii HOM05D007376 ORTHO05D007523 4.1e-15 87.4 486 23.5
CSS0037995 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 1.2e-14 85.9 323 24.5
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.6e-14 84.7 151 36.4
CSS0008783 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.6e-14 84.7 370 26.8
Rhsim01G0036600 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.6e-14 84.7 478 24.3
CSS0043631 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 1.7e-13 82.0 366 24.9
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-13 82.0 511 23.1
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 2.2e-13 81.6 256 28.5
CSS0021465 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.9e-13 81.3 370 26.5
CSS0036762 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 1.4e-12 79.0 200 27.5
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.9e-12 78.6 391 24.3
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.9e-12 78.6 391 24.3
CSS0043583 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 7.2e-12 76.6 138 32.6
Rhsim13G0177800 Rhododendron simsii HOM05D008484 ORTHO05D007523 7.2e-12 76.6 410 22.9
vmacro09690 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 7.2e-12 76.6 405 25.2
CSS0022760 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 9.4e-12 76.3 373 25.5
CSS0030923 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 1.2e-11 75.9 141 32.6
CSS0045699 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 1.2e-11 75.9 141 32.6
CSS0010228 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 1.6e-11 75.5 357 22.4
CSS0018760 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 2.7e-11 74.7 166 30.1
CSS0032852 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 3.6e-11 74.3 273 25.3
CSS0034164 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 6.1e-11 73.6 313 24.0
TWI38G0209 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 6.1e-11 73.6 136 34.6
MD10G1135600 Malus domestica HOM05D001313 ORTHO05D001590 1.4e-10 72.4 288 23.6
RhsimUnG0042600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.8e-10 72.0 261 26.4
RcHm_v2.0_Chr6g0266151 Rosa chinensis HOM05D012588 ORTHO05D001590 3.9e-10 70.9 465 21.7
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.6e-09 68.2 215 27.4
Dinv09570 Davidia involucrata HOM05D016318 ORTHO05D007523 3.3e-09 67.8 232 25.4
vmacro05225 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.3e-09 67.8 120 34.2
CSS0024354 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 4.4e-09 67.4 357 21.0
CSS0004606 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 7.4e-09 66.6 122 37.7
CSS0030913 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D110203 7.4e-09 66.6 339 24.2
CSS0033748 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 7.4e-09 66.6 122 37.7
FAN15G1451 Fragaria x ananassa HOM05D012588 ORTHO05D001590 7.4e-09 66.6 532 21.1
RhsimUnG0192900 Rhododendron simsii HOM05D017774 ORTHO05D013099 7.4e-09 66.6 99 39.4
CSS0001885 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.3e-08 65.9 122 36.9
CSS0027797 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.3e-08 65.9 122 36.9
CSS0028780 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.3e-08 65.9 122 36.9
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.3e-08 65.9 130 37.7
CSS0028075 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D112595 1.7e-08 65.5 335 22.1
Dinv04550 Davidia involucrata HOM05D000065 ORTHO05D000162 2.2e-08 65.1 197 28.4
CSS0032142 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.8e-08 63.9 125 33.6
RcHm_v2.0_Chr6g0266141 Rosa chinensis HOM05D012588 ORTHO05D001590 4.8e-08 63.9 481 22.0
CSS0006459 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.3e-08 63.5 122 36.9
FvH4_2g10140 Fragaria vesca HOM05D012588 ORTHO05D001590 6.3e-08 63.5 534 20.2
CSS0040832 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D109556 8.2e-08 63.2 316 22.8
Lj5A81T86 Lonicera japonica HOM05D008484 ORTHO05D007523 1.1e-07 62.8 310 23.5
Rhsim10G0070400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.4e-07 62.4 336 26.5
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.8e-07 62.0 113 31.9
CSS0013888 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.4e-07 61.6 122 36.9
CSS0008269 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D109135 7.0e-07 60.1 116 31.9
CSS0034588 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 7.0e-07 60.1 112 34.8
Rhsim02G0150000 Rhododendron simsii HOM05D017774 ORTHO05D013099 7.0e-07 60.1 185 26.5
CSS0006796 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.6e-06 58.2 98 36.7
CSS0047379 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.5e-06 57.8 98 35.7
Migut.K00848 Erythranthe guttata HOM05D008484 ORTHO05D007523 3.5e-06 57.8 59 42.4
Rhsim09G0061900 Rhododendron simsii HOM05D027677 ORTHO05D338825 4.5e-06 57.4 85 34.1
Rhsim01G0161300 Rhododendron simsii HOM05D027677 ORTHO05D339865 7.7e-06 56.6 83 33.7


User provided reference genes

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