Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 1.2e-166 589.7 287 100.0
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 5.9e-166 587.4 287 99.7
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 6.3e-152 540.8 285 90.9
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 7.0e-151 537.3 287 89.5
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 1.0e-146 523.5 286 87.4
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 4.0e-146 521.5 286 87.1
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 2.6e-145 518.8 285 86.7
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 2.6e-145 518.8 287 86.8
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 3.4e-145 518.5 287 83.6
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 9.8e-145 516.9 282 88.7
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 1.6e-142 509.6 287 85.7
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 2.0e-142 509.2 287 84.0
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 3.5e-142 508.4 287 83.6
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 1.3e-141 506.5 284 84.2
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 1.7e-141 506.1 284 84.2
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 2.3e-141 505.8 287 82.9
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 5.0e-141 504.6 284 85.2
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 6.5e-141 504.2 287 84.0
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 4.2e-140 501.5 287 82.6
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 5.5e-140 501.1 284 83.5
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 7.2e-140 500.7 287 81.9
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 9.5e-140 500.4 294 81.3
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 9.5e-140 500.4 284 83.5
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 1.2e-139 500.0 287 81.9
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 8.0e-139 497.3 284 82.7
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 1.8e-138 496.1 284 83.5
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 8.9e-138 493.8 284 82.0
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 2.0e-137 492.7 284 82.0
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 5.7e-137 491.1 298 78.9
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 7.5e-137 490.7 287 78.4
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 3.7e-136 488.4 285 81.4
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 3.7e-136 488.4 287 79.1
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 3.7e-136 488.4 287 81.5
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 4.9e-136 488.0 285 81.1
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 6.3e-136 487.6 287 81.9
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 6.3e-136 487.6 285 81.8
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 1.4e-135 486.5 287 78.4
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 1.8e-135 486.1 271 85.6
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 2.4e-135 485.7 287 81.5
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 2.4e-135 485.7 285 82.1
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 7.0e-135 484.2 287 79.8
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 2.7e-134 482.3 309 76.4
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 7.8e-134 480.7 285 80.7
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 1.3e-133 479.9 282 80.9
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 1.7e-133 479.6 284 79.9
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 2.3e-133 479.2 284 79.2
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 2.3e-133 479.2 284 79.6
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 2.9e-133 478.8 287 80.5
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 2.9e-133 478.8 287 80.5
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 5.0e-133 478.0 287 80.1
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 5.0e-133 478.0 287 76.7
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 6.6e-133 477.6 284 78.9
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 8.6e-133 477.2 288 77.1
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 8.6e-133 477.2 287 77.0
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 1.1e-132 476.9 290 76.9
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 2.5e-132 475.7 285 78.6
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 2.5e-132 475.7 287 76.3
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 2.5e-132 475.7 325 71.1
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 3.3e-132 475.3 285 78.6
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 7.3e-132 474.2 284 78.9
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 1.2e-131 473.4 284 78.5
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 1.2e-131 473.4 286 78.3
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.6e-131 473.0 288 76.4
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 2.1e-131 472.6 286 79.4
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 6.1e-131 471.1 283 76.3
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 2.3e-130 469.2 287 76.7
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 3.0e-130 468.8 287 74.9
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 4.0e-130 468.4 288 77.1
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 6.8e-130 467.6 281 80.1
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 6.8e-130 467.6 278 78.1
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 2.0e-129 466.1 286 76.9
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 2.0e-129 466.1 285 76.8
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 9.8e-129 463.8 285 77.2
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 1.3e-128 463.4 282 78.4
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 2.2e-128 462.6 287 74.2
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 4.9e-128 461.5 287 74.6
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 3.2e-127 458.8 287 74.2
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 7.8e-126 454.1 286 72.0
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 1.3e-125 453.4 288 73.6
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 3.0e-125 452.2 286 72.0
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 4.3e-124 448.4 269 78.8
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 1.6e-123 446.4 269 78.1
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 1.6e-123 446.4 269 78.1
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 3.1e-122 442.2 286 72.0
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 4.0e-122 441.8 274 74.1
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 5.2e-122 441.4 283 71.7
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 1.2e-121 440.3 285 70.9
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 9.8e-121 437.2 269 74.7
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 1.7e-120 436.4 268 76.1
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 4.7e-115 418.3 262 73.3
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 1.8e-114 416.4 246 80.1
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 2.2e-112 409.5 280 70.0
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 6.0e-110 401.4 246 74.4
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 1.0e-109 400.6 280 68.2
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 1.7e-109 399.8 283 67.1
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 8.6e-109 397.5 239 80.8
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 1.6e-107 393.3 285 66.3
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 2.2e-104 382.9 213 86.4
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 3.6e-91 339.0 175 92.0
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 1.1e-90 337.4 268 60.4
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 9.6e-76 287.7 260 49.6
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 1.8e-74 283.5 259 52.5
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 1.5e-68 263.8 253 49.8
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 2.0e-65 253.4 258 47.3
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.0e-57 226.9 151 71.5
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 5.7e-52 208.8 110 92.7
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 8.0e-46 188.3 105 81.0
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.0e-45 188.0 304 41.1
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 1.1e-44 184.5 253 38.7
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.3e-43 181.0 194 51.5
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 1.7e-40 170.6 163 58.3
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 1.7e-35 154.1 94 74.5
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.2e-35 153.7 95 73.7
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 3.5e-33 146.4 77 90.9
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 1.0e-32 144.8 88 76.1
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 2.5e-23 113.6 67 79.1
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 7.2e-23 112.1 66 78.8
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 9.8e-12 75.1 41 73.2
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.3e-08 63.9 48 70.8


User provided reference genes

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