Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002084 Camellia sinensis var. sinensis HOM05D008224 ORTHO05D010083 7.6e-63 243.8 137 100.0
Potri.005G114500 Populus trichocarpa HOM05D008224 ORTHO05D010083 1.3e-22 110.2 132 53.0
Lj4P218T44 Lonicera japonica HOM05D008224 ORTHO05D010083 9.4e-21 104.0 134 53.7
Nitab4.5_0003271g0030 Nicotiana tabacum HOM05D008224 ORTHO05D010083 9.4e-21 104.0 130 50.0
COL.COLO4_21914 Corchorus olitorius HOM05D008224 ORTHO05D010083 1.6e-20 103.2 134 53.0
Atru.chr4.381 Acer truncatum HOM05D008224 ORTHO05D010083 4.0e-19 98.6 145 49.7
Manes.02G104200 Manihot esculenta HOM05D008224 ORTHO05D010083 5.2e-19 98.2 121 48.8
Nitab4.5_0006286g0060 Nicotiana tabacum HOM05D008224 ORTHO05D010083 8.8e-19 97.4 130 50.0
Prupe.7G167900 Prunus persica HOM05D008224 ORTHO05D010083 1.2e-18 97.1 124 50.8
Thecc.01G019300 Theobroma cacao HOM05D008224 ORTHO05D010083 3.4e-18 95.5 138 48.6
Sabra05G0093700 Salix brachista HOM05D008224 ORTHO05D010083 4.4e-18 95.1 137 48.2
Haze_03767 Corylus avellana HOM05D008224 ORTHO05D010083 2.8e-17 92.4 138 45.7
Ciclev10027456m.g Citrus clementina HOM05D008224 ORTHO05D010083 3.7e-17 92.0 141 55.3
Gorai.011G098500 Gossypium raimondii HOM05D008224 ORTHO05D010083 1.4e-16 90.1 133 47.4
PGSC0003DMG400003638 Solanum tuberosum HOM05D008224 ORTHO05D010083 1.4e-16 90.1 107 52.3
Sopen02g028710 Solanum pennellii HOM05D008224 ORTHO05D010083 1.8e-16 89.7 118 48.3
Gohir.A10G098400 Gossypium hirsutum HOM05D008224 ORTHO05D010083 2.4e-16 89.4 133 47.4
Gohir.D10G089800 Gossypium hirsutum HOM05D008224 ORTHO05D010083 4.1e-16 88.6 133 46.6
QL12p007153 Quercus lobata HOM05D008224 ORTHO05D010083 4.1e-16 88.6 128 46.9
CiPaw.08G131800 Carya illinoinensis HOM05D008224 ORTHO05D010083 7.0e-16 87.8 117 48.7
Solyc02g083930.1 Solanum lycopersicum HOM05D008224 ORTHO05D010083 7.0e-16 87.8 107 50.5
Gohir.A11G175668 Gossypium hirsutum HOM05D008224 ORTHO05D010083 2.7e-15 85.9 138 55.8
TAR381G1028 Trochodendron aralioides HOM05D008224 ORTHO05D010083 2.7e-15 85.9 133 47.4
Gorai.003G009900 Gossypium raimondii HOM05D008224 ORTHO05D010083 3.5e-15 85.5 116 46.6
Lalb_Chr09g0321801 Lupinus albus HOM05D008224 ORTHO05D010083 3.5e-15 85.5 116 49.1
Peaxi162Scf00083g00052 Petunia axillaris HOM05D008224 ORTHO05D010083 7.7e-15 84.3 134 43.3
QL06p032684 Quercus lobata HOM05D008224 ORTHO05D010083 7.7e-15 84.3 128 46.1
Gohir.D11G183450 Gossypium hirsutum HOM05D008224 ORTHO05D010083 1.3e-14 83.6 138 47.8
Hma1.2p1_0258F.1_g104170 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 1.3e-14 83.6 94 56.4
Actinidia17446 Actinidia chinensis HOM05D008224 ORTHO05D010083 5.0e-14 81.6 102 52.9
Actinidia28703 Actinidia chinensis HOM05D008224 ORTHO05D010083 8.5e-14 80.9 121 46.3
Gorai.007G195300 Gossypium raimondii HOM05D008224 ORTHO05D010083 8.5e-14 80.9 138 50.7
Actinidia22982 Actinidia chinensis HOM05D002668 ORTHO05D003295 1.1e-13 80.5 102 53.9
TAR625G0799 Trochodendron aralioides HOM05D008224 ORTHO05D010083 1.1e-13 80.5 102 47.1
Oeu064592.1 Olea europaea HOM05D008224 ORTHO05D010083 1.9e-13 79.7 119 46.2
Phvul.002G109500 Phaseolus vulgaris HOM05D008224 ORTHO05D010083 4.2e-13 78.6 99 52.5
Aqoxy5G01777 Aquilegia oxysepala HOM05D008224 ORTHO05D010083 7.2e-13 77.8 132 40.9
ECA246G4291 Erigeron canadensis HOM05D008224 ORTHO05D010083 2.1e-12 76.3 140 38.6
Glyma.11G076300 Glycine max HOM05D008224 ORTHO05D010083 2.1e-12 76.3 99 50.5
Glyma.01G166900 Glycine max HOM05D008224 ORTHO05D010083 1.0e-11 73.9 99 49.5
Medtr5g021840 Medicago truncatula HOM05D008224 ORTHO05D010083 1.0e-11 73.9 127 43.3
Cc07_g10680 Coffea canephora HOM05D008224 ORTHO05D010083 1.4e-11 73.6 99 47.5
Ca_25829_v3 Cicer arietinum L. HOM05D008224 ORTHO05D010083 2.3e-11 72.8 127 47.2
EL10Ac6g15476 Beta vulgaris HOM05D008224 ORTHO05D010083 4.0e-11 72.0 168 44.6
Hma1.2p1_0956F.1_g241380 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 1.2e-10 70.5 98 45.9
Hma1.2p1_2239F.1_g317816 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 1.2e-10 70.5 98 45.9
CsaV3_6G047070 Cucumis sativus L. HOM05D008224 ORTHO05D010083 4.4e-10 68.6 106 44.3
Psat2g155040 Pisum sativum HOM05D008224 ORTHO05D010083 5.7e-10 68.2 116 44.0
DCAR_016610 Daucus carota HOM05D008224 ORTHO05D010083 1.3e-09 67.0 108 46.3
FvH4_1g11880 Fragaria vesca HOM05D008224 ORTHO05D010083 1.3e-09 67.0 76 53.9
FAN19G0355 Fragaria x ananassa HOM05D008224 ORTHO05D010083 1.3e-09 67.0 76 53.9
FAN26G2375 Fragaria x ananassa HOM05D011822 ORTHO05D010083 1.7e-09 66.6 104 45.2
Nn5g30159 Nelumbo nucifera HOM05D008224 ORTHO05D010083 1.7e-09 66.6 106 40.6
ClCG01G020280 Citrullus lanatus HOM05D008224 ORTHO05D010083 2.8e-09 65.9 129 38.8
TPR.G18188 Trifolium pratense HOM05D008224 ORTHO05D010083 2.8e-09 65.9 95 46.3
Rhsim10G0212800 Rhododendron simsii HOM05D008224 ORTHO05D010083 8.3e-09 64.3 105 43.8
Sed0025479 Sechium edule HOM05D008224 ORTHO05D010083 1.4e-08 63.5 75 50.7
Nn1g05883 Nelumbo nucifera HOM05D008224 ORTHO05D010083 4.1e-08 62.0 77 51.9
MELO3C007900.2 Cucumis melo HOM05D008224 ORTHO05D010083 7.0e-08 61.2 86 46.5
CARHR281490 Cardamine hirsuta HOM05D014245 ORTHO05D010083 9.1e-08 60.8 94 40.4
Ah.03g148720 Amaranthus hybridus HOM05D008224 ORTHO05D010083 1.2e-07 60.5 163 31.3
Sc16g0002160 Simmondsia chinensis HOM05D008224 ORTHO05D010083 1.2e-07 60.5 138 39.9
Carub.0008s2826 Capsella rubella HOM05D014245 ORTHO05D010083 1.6e-07 60.1 106 36.8
Gohir.A02G170400 Gossypium hirsutum HOM05D008224 ORTHO05D010083 1.6e-07 60.1 84 44.0
Gohir.D03G009600 Gossypium hirsutum HOM05D008224 ORTHO05D010083 1.6e-07 60.1 89 43.8
Sp2g30460 Schrenkiella parvula HOM05D014245 ORTHO05D010083 1.6e-07 60.1 94 42.6
Lsat_1_v5_gn_3_74461 Lactuca sativa HOM05D008224 ORTHO05D010083 3.5e-07 58.9 128 38.3
ATR0627G002 Amborella trichopoda HOM05D008224 ORTHO05D010083 4.5e-07 58.5 84 39.3
Thhalv10005172m.g Eutrema salsugineum HOM05D014245 ORTHO05D010083 4.5e-07 58.5 94 38.3
ATR0481G006 Amborella trichopoda HOM05D008224 ORTHO05D010083 1.3e-06 57.0 83 38.6
BcaB02g10776 Brassica carinata HOM05D014245 ORTHO05D010083 5.0e-06 55.1 94 38.3
A06p26690 Brassica napus HOM05D014245 ORTHO05D010083 6.6e-06 54.7 96 39.6


User provided reference genes

Program Settings