Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002080 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 1.1e-256 889.4 431 100.0
CSS0040007 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 8.1e-252 873.2 431 98.6
Rhsim01G0058900 Rhododendron simsii HOM05D005563 ORTHO05D006667 3.7e-180 635.2 428 73.1
Dinv22054 Davidia involucrata HOM05D005563 ORTHO05D006667 4.1e-179 631.7 432 70.6
Rhsim01G0059200 Rhododendron simsii HOM05D005563 ORTHO05D006667 2.6e-178 629.0 428 72.7
Actinidia29363 Actinidia chinensis HOM05D005563 ORTHO05D006667 1.5e-176 623.2 409 75.8
vmacro07741 Vaccinium macrocarpon HOM05D005563 ORTHO05D006667 2.1e-175 619.4 427 71.4
GSVIVG01037139001 Vitis vinifera HOM05D005563 ORTHO05D006667 2.2e-156 556.2 407 66.3
Cfa007306 Carpinus fangiana HOM05D005563 ORTHO05D006667 4.9e-156 555.1 413 65.1
Ciclev10020232m.g Citrus clementina HOM05D005563 ORTHO05D006667 1.2e-151 540.4 426 61.5
QL09p001227 Quercus lobata HOM05D005563 ORTHO05D006667 2.1e-151 539.7 413 64.6
Prupe.8G002700 Prunus persica HOM05D005563 ORTHO05D006667 2.8e-151 539.3 410 64.9
TAR628G0232 Trochodendron aralioides HOM05D005563 ORTHO05D006667 1.4e-150 537.0 414 63.8
CiPaw.04G008700 Carya illinoinensis HOM05D005563 ORTHO05D006667 1.3e-148 530.4 409 64.5
RcHm_v2.0_Chr6g0249561 Rosa chinensis HOM05D005563 ORTHO05D006667 1.2e-146 523.9 411 63.3
Haze_14007 Corylus avellana HOM05D005563 ORTHO05D006667 2.7e-146 522.7 517 53.2
Duzib177G0343 Durio zibethinus HOM05D005563 ORTHO05D006667 7.8e-146 521.2 411 62.3
Thecc.05G149300 Theobroma cacao HOM05D005563 ORTHO05D006667 2.5e-144 516.2 413 61.5
CANSAT64G1925 Cannabis sativa HOM05D005563 ORTHO05D006667 2.0e-141 506.5 408 62.0
MD10G1001500 Malus domestica HOM05D005563 ORTHO05D006667 1.3e-140 503.8 413 63.0
Potri.013G094800 Populus trichocarpa HOM05D005563 ORTHO05D006667 2.2e-140 503.1 411 60.8
Atru.chr13.2584 Acer truncatum HOM05D005563 ORTHO05D006667 1.4e-139 500.4 427 58.3
FvH4_2g00270 Fragaria vesca HOM05D005563 ORTHO05D006667 7.0e-139 498.0 416 60.6
Cc02_g22680 Coffea canephora HOM05D005563 ORTHO05D006667 1.0e-137 494.2 409 60.4
DCAR_010113 Daucus carota HOM05D005563 ORTHO05D006667 1.7e-137 493.4 428 58.6
DCAR_001180 Daucus carota HOM05D005563 ORTHO05D006667 5.1e-137 491.9 429 57.8
Oeu009445.1 Olea europaea HOM05D005563 ORTHO05D006667 1.2e-135 487.3 415 59.8
Nn5g27214 Nelumbo nucifera HOM05D005563 ORTHO05D006667 1.6e-135 486.9 414 59.9
Sabra13G0080900 Salix brachista HOM05D005563 ORTHO05D006667 2.8e-135 486.1 411 60.1
FAN24G3564 Fragaria x ananassa HOM05D005563 ORTHO05D006667 6.2e-135 485.0 435 57.7
ECA232G0495 Erigeron canadensis HOM05D004116 ORTHO05D004734 1.1e-134 484.2 399 61.7
Glyma.13G312100 Glycine max HOM05D005563 ORTHO05D006667 6.8e-134 481.5 409 60.9
Oeu019017.1 Olea europaea HOM05D005563 ORTHO05D006667 8.9e-134 481.1 415 60.0
Gorai.009G262600 Gossypium raimondii HOM05D005563 ORTHO05D006667 5.8e-133 478.4 407 58.5
DCAR_027509 Daucus carota HOM05D005563 ORTHO05D006667 7.5e-133 478.0 426 57.0
Lalb_Chr24g0393341 Lupinus albus HOM05D005563 ORTHO05D006667 6.4e-132 474.9 425 56.9
Lj3g0011209 Lotus japonicus HOM05D005563 ORTHO05D006667 8.3e-132 474.6 408 60.3
ClCG11G000440 Citrullus lanatus HOM05D005563 ORTHO05D006667 1.9e-131 473.4 410 58.5
Aqoxy1G00244 Aquilegia oxysepala HOM05D005563 ORTHO05D006667 5.4e-131 471.9 410 57.6
Migut.G00338 Erythranthe guttata HOM05D005563 ORTHO05D006667 1.2e-130 470.7 414 56.3
Phvul.005G118600 Phaseolus vulgaris HOM05D005563 ORTHO05D006667 1.2e-130 470.7 409 59.9
arahy.Tifrunner.gnm1.ann1.QV839S Arachis hypogaea HOM05D005563 ORTHO05D006667 1.6e-130 470.3 410 58.3
VMungo1080G1448 Vigna mungo HOM05D005563 ORTHO05D006667 1.5e-128 463.8 404 59.7
CAN.G587.23 Capsicum annuum HOM05D005563 ORTHO05D006667 4.3e-128 462.2 407 58.0
Nitab4.5_0006591g0020 Nicotiana tabacum HOM05D005563 ORTHO05D006667 1.6e-127 460.3 410 58.0
TAR633G2728 Trochodendron aralioides HOM05D005563 ORTHO05D006667 2.1e-127 459.9 417 56.1
PGR044G0823 Punica granatum HOM05D005563 ORTHO05D006667 1.4e-126 457.2 412 58.5
TPR.G23443 Trifolium pratense HOM05D005563 ORTHO05D006667 1.4e-126 457.2 425 57.9
CsaV3_6G042510 Cucumis sativus L. HOM05D005563 ORTHO05D006667 4.0e-126 455.7 410 56.8
CAN.G769.9 Capsicum annuum HOM05D005563 ORTHO05D006667 2.6e-125 453.0 407 58.0
Medtr8g103020 Medicago truncatula HOM05D005563 ORTHO05D006667 4.9e-124 448.7 425 57.2
Psat7g014680 Pisum sativum HOM05D005563 ORTHO05D006667 3.2e-123 446.0 436 54.8
Solyc03g026100.1 Solanum lycopersicum HOM05D005563 ORTHO05D006667 5.4e-123 445.3 408 57.1
SGA_v2.0_scaffold277G46672 Striga asiatica HOM05D005563 ORTHO05D006667 4.6e-122 442.2 417 55.4
Hund26934 Selenicereus undatus HOM05D005563 ORTHO05D006667 8.7e-121 438.0 406 56.4
Sopen03g004940 Solanum pennellii HOM05D005563 ORTHO05D006667 8.7e-121 438.0 408 56.4
PGSC0003DMG400014277 Solanum tuberosum HOM05D005563 ORTHO05D006667 2.5e-120 436.4 407 57.2
Lsat_1_v5_gn_4_170241 Lactuca sativa HOM05D005563 ORTHO05D006667 3.3e-120 436.0 411 56.7
Manes.18G108800 Manihot esculenta HOM05D005563 ORTHO05D006667 1.1e-118 431.0 363 60.9
TWI18G0160 Tripterygium wilfordii HOM05D005563 ORTHO05D006667 1.1e-118 431.0 427 53.6
PSO761G0451 Papaver somniferum HOM05D005563 ORTHO05D006667 3.1e-118 429.5 421 54.9
Eucgr.G00337 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.5e-117 427.2 411 56.2
Aa31LG4G9220 Aethionema arabicum HOM05D005563 ORTHO05D006667 1.7e-116 423.7 407 54.5
CARHR064610 Cardamine hirsuta HOM05D005563 ORTHO05D006667 2.2e-116 423.3 411 53.8
Sp5g26490 Schrenkiella parvula HOM05D005563 ORTHO05D006667 1.4e-115 420.6 409 54.0
C06p35680 Brassica napus HOM05D005563 ORTHO05D006667 4.6e-114 415.6 407 53.6
BcaC08g45784 Brassica carinata HOM05D005563 ORTHO05D006667 6.0e-114 415.2 407 53.6
A07p30780 Brassica napus HOM05D005563 ORTHO05D006667 6.0e-114 415.2 408 54.2
AL2G30920 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 1.7e-113 413.7 412 53.6
BcaB03g14889 Brassica carinata HOM05D005563 ORTHO05D006667 1.7e-113 413.7 410 53.7
MBI14_g08074_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 1.7e-113 413.7 393 57.3
THA.LOC104825030 Tarenaya hassleriana HOM05D005563 ORTHO05D006667 3.0e-113 412.9 415 52.3
BolC6t38691H Brassica oleracea HOM05D005563 ORTHO05D006667 8.7e-113 411.4 411 53.0
Thhalv10018623m.g Eutrema salsugineum HOM05D005563 ORTHO05D006667 7.3e-112 408.3 407 53.1
BraA07t30715Z Brassica rapa HOM05D005563 ORTHO05D006667 9.6e-112 407.9 412 53.4
AT5G24670 Arabidopsis thaliana HOM05D005563 ORTHO05D006667 1.6e-111 407.1 413 52.5
AL1G12770 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 6.2e-111 405.2 414 53.4
BcaB03g15600 Brassica carinata HOM05D005563 ORTHO05D006667 1.8e-110 403.7 407 52.8
Carub.0002s1819 Capsella rubella HOM05D005563 ORTHO05D006667 2.4e-110 403.3 413 52.3
PSO170G2533 Papaver somniferum HOM05D005563 ORTHO05D006667 2.0e-109 400.2 413 52.8
arahy.Tifrunner.gnm1.ann1.NB4SND Arachis hypogaea HOM05D005563 ORTHO05D006667 2.6e-109 399.8 431 51.7
PSO407G0243 Papaver somniferum HOM05D005563 ORTHO05D006667 2.4e-107 393.3 422 51.2
Nitab4.5_0001489g0080 Nicotiana tabacum HOM05D005563 ORTHO05D006667 3.2e-107 392.9 366 56.6
Carub.0004s0662 Capsella rubella HOM05D005563 ORTHO05D006667 2.1e-106 390.2 404 52.0
PSO017G5640 Papaver somniferum HOM05D005563 ORTHO05D006667 4.6e-106 389.0 418 51.2
HanXRQChr15g0488461 Helianthus annuus HOM05D005563 ORTHO05D006667 8.7e-105 384.8 358 56.7
Peaxi162Scf00078g01133 Petunia axillaris HOM05D005563 ORTHO05D006667 1.5e-104 384.0 351 57.0
AUR62023340 Chenopodium quinoa HOM05D005563 ORTHO05D006667 2.5e-104 383.3 406 52.5
Sed0012109 Sechium edule HOM05D005563 ORTHO05D006667 1.8e-102 377.1 332 58.4
Nitab4.5_0000079g0140 Nicotiana tabacum HOM05D005563 ORTHO05D006667 9.0e-102 374.8 404 51.7
MELO3C022956.2 Cucumis melo HOM05D005563 ORTHO05D006667 7.1e-99 365.2 357 53.2
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 9.3e-99 364.8 380 53.2
AUR62013814 Chenopodium quinoa HOM05D005563 ORTHO05D006667 5.1e-97 359.0 507 43.6
Gohir.A05G248000 Gossypium hirsutum HOM05D005563 ORTHO05D006667 1.1e-94 351.3 320 56.2
Gohir.D05G248801 Gossypium hirsutum HOM05D005563 ORTHO05D006667 1.5e-93 347.4 320 55.9
FAN19G1429 Fragaria x ananassa HOM05D005563 ORTHO05D006667 8.4e-92 341.7 444 47.3
ATR0580G344 Amborella trichopoda HOM05D005563 ORTHO05D006667 4.2e-91 339.3 424 44.8
TPR.G11352 Trifolium pratense HOM05D005563 ORTHO05D006667 3.8e-84 316.2 313 55.6
AUR62037990 Chenopodium quinoa HOM05D005563 ORTHO05D006667 1.3e-79 301.2 350 47.7
Eucgr.C03620 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.1e-78 298.1 292 56.8
BcaB03g14888 Brassica carinata HOM05D005563 ORTHO05D006667 5.3e-78 295.8 355 46.5
EL10Ac1g00691 Beta vulgaris HOM05D005563 ORTHO05D006667 5.9e-77 292.4 365 46.8
COL.COLO4_34067 Corchorus olitorius HOM05D005563 ORTHO05D006667 3.3e-72 276.6 310 50.3
Sc19g0006900 Simmondsia chinensis HOM05D005563 ORTHO05D006667 9.7e-72 275.0 299 51.5
Ca_17321_v3 Cicer arietinum L. HOM05D005563 ORTHO05D006667 1.4e-62 244.6 316 49.1
Cpa.g.sc249.8 Carica papaya HOM05D005563 ORTHO05D006667 2.9e-60 236.9 166 68.1
Mapoly0019s0003 Marchantia polymorpha HOM05D005563 ORTHO05D006667 3.4e-56 223.4 434 34.8
CDE04G2046 Ceratophyllum demersum HOM05D005563 ORTHO05D006667 4.8e-55 219.5 266 47.7
HPP92_009712 Vanilla planifolia HOM05D005563 ORTHO05D006667 1.4e-54 218.0 267 48.7
SHI17431 Sapria himalayana HOM05D005563 ORTHO05D006667 1.8e-54 217.6 276 43.8
BolC6t39597H Brassica oleracea HOM05D005563 ORTHO05D006667 3.1e-54 216.9 336 40.2
Pp3c5_5220 Physcomitrium patens HOM05D005563 ORTHO05D006667 9.1e-54 215.3 399 36.8
SMO356G0078 Selaginella moellendorffii HOM05D005563 ORTHO05D006667 1.2e-50 204.9 405 33.6
AagrBONN_evm.TU.Sc2ySwM_344.1216 Anthoceros agrestis HOM05D005563 ORTHO05D006667 4.7e-50 203.0 465 31.8
Actinidia03534 Actinidia chinensis HOM05D005563 ORTHO05D006667 4.0e-49 199.9 238 50.4
Zm00001eb088860 Zea mays HOM05D005563 ORTHO05D006667 1.9e-43 181.0 267 41.6
Eucgr.C03478 Eucalyptus grandis HOM05D005563 ORTHO05D006667 7.5e-40 169.1 249 41.8
MBI14_g20078_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 3.9e-36 156.8 86 79.1
MBI13_g08747_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 4.3e-35 153.3 86 75.6
MBI08_g10505_MAGBIO Magnolia biondii HOM05D000152 ORTHO05D006667 7.3e-35 152.5 83 79.5
MBI15_g36474_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 6.2e-34 149.4 86 74.4
TPR.G11340 Trifolium pratense HOM05D005563 ORTHO05D006667 3.1e-33 147.1 74 86.5
Eucgr.C03640 Eucalyptus grandis HOM05D005563 ORTHO05D006667 5.2e-33 146.4 113 58.4
DCAR_001179 Daucus carota HOM05D005563 ORTHO05D006667 1.3e-31 141.7 172 46.5
MCO11G544 Micromonas commoda HOM05D005563 ORTHO05D006667 1.2e-29 135.2 379 29.0
Eucgr.L00998 Eucalyptus grandis HOM05D005563 ORTHO05D006667 2.0e-29 134.4 204 43.1
Thecc.10G189600 Theobroma cacao HOM05D005563 ORTHO05D006667 9.5e-27 125.6 103 60.2
CBR_g50242 Chara braunii HOM05D005563 ORTHO05D006667 4.7e-26 123.2 582 25.3
C06p46160 Brassica napus HOM05D005563 ORTHO05D006667 5.2e-25 119.8 198 41.4
CBR_g8323 Chara braunii HOM05D005563 ORTHO05D006667 2.4e-22 110.9 613 23.3
FAN20G2324 Fragaria x ananassa HOM05D005563 ORTHO05D006667 1.3e-20 105.1 57 77.2
Thecc.10G189700 Theobroma cacao HOM05D005563 ORTHO05D006667 1.1e-19 102.1 114 48.2
Cre10.g439200 Chlamydomonas reinhardtii HOM05D005563 ORTHO05D006667 2.3e-17 94.4 70 61.4
Eucgr.C03636 Eucalyptus grandis HOM05D005563 ORTHO05D006667 4.0e-17 93.6 168 36.3
Haze_14787 Corylus avellana HOM05D005563 ORTHO05D006667 2.2e-15 87.8 88 48.9
Actinidia28221 Actinidia chinensis HOM05D005563 ORTHO05D006667 7.8e-13 79.3 70 64.3
PRCOL_00003298 Prasinoderma coloniale HOM05D005563 ORTHO05D006667 1.1e-11 75.5 72 48.6
SHI17433 Sapria himalayana HOM05D005563 ORTHO05D006667 4.3e-11 73.6 62 53.2


User provided reference genes

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