Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002071 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 2.1e-64 248.8 119 100.0
CSS0025603 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 3.6e-53 211.5 130 84.6
CSS0042439 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 5.3e-52 207.6 130 83.1
CSS0038861 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 8.4e-50 200.3 129 82.2
CSS0023832 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 5.1e-39 164.5 125 74.4
CSS0039613 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 5.5e-33 144.4 83 84.3
Dinv39815 Davidia involucrata HOM05D004656 ORTHO05D005404 3.9e-31 138.3 84 79.8
QL03p053091 Quercus lobata HOM05D004656 ORTHO05D005404 8.7e-31 137.1 84 78.6
QL05p081970 Quercus lobata HOM05D004656 ORTHO05D005404 8.7e-31 137.1 84 78.6
vmacro03819 Vaccinium macrocarpon HOM05D004656 ORTHO05D005404 1.5e-30 136.3 86 76.7
Nn2g12691 Nelumbo nucifera HOM05D004656 ORTHO05D005404 6.2e-29 131.0 84 73.8
Duzib160G0757 Durio zibethinus HOM05D004656 ORTHO05D005404 8.2e-29 130.6 85 75.3
Gohir.D10G021600 Gossypium hirsutum HOM05D004656 ORTHO05D005404 1.1e-28 130.2 84 75.0
Gohir.A10G020800 Gossypium hirsutum HOM05D004656 ORTHO05D005404 1.4e-28 129.8 84 73.8
TAR626G0166 Trochodendron aralioides HOM05D004656 ORTHO05D005404 1.4e-28 129.8 84 72.6
Potri.004G034900 Populus trichocarpa HOM05D004656 ORTHO05D005404 2.4e-28 129.0 84 75.0
PSO063G3544 Papaver somniferum HOM05D004656 ORTHO05D005404 3.1e-28 128.6 86 72.1
GSVIVG01003202001 Vitis vinifera HOM05D004656 ORTHO05D005404 3.1e-28 128.6 82 76.8
Gorai.011G022700 Gossypium raimondii HOM05D004656 ORTHO05D005404 4.1e-28 128.3 84 73.8
CSS0036547 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 6.9e-28 127.5 129 58.9
Thecc.06G198700 Theobroma cacao HOM05D004656 ORTHO05D005404 6.9e-28 127.5 84 75.0
GSVIVG01003206001 Vitis vinifera HOM05D004656 ORTHO05D005404 6.9e-28 127.5 82 75.6
Glyma.07G190600 Glycine max HOM05D004656 ORTHO05D005404 1.5e-27 126.3 83 73.5
MD10G1303000 Malus domestica HOM05D004656 ORTHO05D005404 2.6e-27 125.6 85 71.8
VMungo0251G3002 Vigna mungo HOM05D004656 ORTHO05D005404 4.5e-27 124.8 83 72.3
Atru.chr10.2003 Acer truncatum HOM05D004656 ORTHO05D005404 5.8e-27 124.4 85 71.8
CAN.G1181.24 Capsicum annuum HOM05D004656 ORTHO05D005404 5.8e-27 124.4 78 73.1
Ciclev10014364m.g Citrus clementina HOM05D004656 ORTHO05D005404 7.6e-27 124.0 85 70.6
PSO782G2217 Papaver somniferum HOM05D004656 ORTHO05D005404 7.6e-27 124.0 83 72.3
Cfa000358 Carpinus fangiana HOM05D004656 ORTHO05D005404 1.0e-26 123.6 83 71.1
COL.COLO4_31575 Corchorus olitorius HOM05D004656 ORTHO05D005404 1.0e-26 123.6 75 78.7
Solyc02g079050.3 Solanum lycopersicum HOM05D004656 ORTHO05D005404 1.0e-26 123.6 78 73.1
Sopen02g023860 Solanum pennellii HOM05D004656 ORTHO05D005404 1.0e-26 123.6 78 73.1
TWI38G2153 Tripterygium wilfordii HOM05D004656 ORTHO05D005404 1.0e-26 123.6 84 71.4
Haze_06568 Corylus avellana HOM05D004656 ORTHO05D005404 1.3e-26 123.2 83 69.9
Sabra04G0020600 Salix brachista HOM05D004656 ORTHO05D005404 1.3e-26 123.2 84 72.6
RcHm_v2.0_Chr5g0006531 Rosa chinensis HOM05D004656 ORTHO05D005404 1.7e-26 122.9 90 68.9
Phvul.002G222500 Phaseolus vulgaris HOM05D004656 ORTHO05D005404 2.2e-26 122.5 83 71.1
Nitab4.5_0000190g0180 Nicotiana tabacum HOM05D004656 ORTHO05D005404 2.9e-26 122.1 78 71.8
Peaxi162Scf00588g01013 Petunia axillaris HOM05D004656 ORTHO05D005404 2.9e-26 122.1 78 71.8
Lalb_Chr05g0218181 Lupinus albus HOM05D004656 ORTHO05D005404 6.5e-26 120.9 75 74.7
ClCG01G022700 Citrullus lanatus HOM05D004656 ORTHO05D005404 1.4e-25 119.8 83 69.9
Prupe.4G036500 Prunus persica HOM05D004656 ORTHO05D005404 1.4e-25 119.8 77 74.0
Lj2A281G21 Lonicera japonica HOM05D004656 ORTHO05D005404 2.5e-25 119.0 81 71.6
Lj4g0008048 Lotus japonicus HOM05D004656 ORTHO05D005404 2.5e-25 119.0 75 76.0
Psat7g109640 Pisum sativum HOM05D004656 ORTHO05D005404 2.5e-25 119.0 77 72.7
arahy.Tifrunner.gnm1.ann1.9GFP5H Arachis hypogaea HOM05D004656 ORTHO05D005404 5.5e-25 117.9 84 66.7
TPR.G32417 Trifolium pratense HOM05D004656 ORTHO05D005404 5.5e-25 117.9 83 68.7
FvH4_3g04050 Fragaria vesca HOM05D004656 ORTHO05D005404 7.2e-25 117.5 86 67.4
FAN11G0019 Fragaria x ananassa HOM05D004656 ORTHO05D005404 7.2e-25 117.5 86 67.4
Medtr4g090990 Medicago truncatula HOM05D004656 ORTHO05D005404 7.2e-25 117.5 83 67.5
MELO3C025319.2 Cucumis melo HOM05D004656 ORTHO05D005404 9.3e-25 117.1 83 67.5
Sed0019970 Sechium edule HOM05D004656 ORTHO05D005404 9.3e-25 117.1 85 67.1
CiPaw.09G158300 Carya illinoinensis HOM05D004656 ORTHO05D005404 1.2e-24 116.7 84 66.7
FAN16G1451 Fragaria x ananassa HOM05D004656 ORTHO05D005404 1.2e-24 116.7 84 69.0
Cc02_g12490 Coffea canephora HOM05D004656 ORTHO05D005404 2.1e-24 115.9 83 65.1
arahy.Tifrunner.gnm1.ann1.N579TE Arachis hypogaea HOM05D004656 ORTHO05D005404 2.7e-24 115.5 84 65.5
CANSAT56G3558 Cannabis sativa HOM05D004656 ORTHO05D005404 2.7e-24 115.5 84 66.7
Aqoxy7G03085 Aquilegia oxysepala HOM05D004656 ORTHO05D005404 3.5e-24 115.2 83 69.9
DCAR_004136 Daucus carota HOM05D004656 ORTHO05D005404 3.5e-24 115.2 84 69.0
FAN25G3623 Fragaria x ananassa HOM05D004656 ORTHO05D005404 6.1e-24 114.4 86 65.1
MBI16_g41806_MAGBIO Magnolia biondii HOM05D004656 ORTHO05D005404 6.1e-24 114.4 83 67.5
Oeu053939.3 Olea europaea HOM05D004656 ORTHO05D005404 7.9e-24 114.0 83 62.7
Ca_18485_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 1.3e-23 113.2 71 74.6
Manes.15G100000 Manihot esculenta HOM05D004656 ORTHO05D005404 1.3e-23 113.2 85 64.7
CsaV3_1G030810 Cucumis sativus L. HOM05D004656 ORTHO05D005404 2.3e-23 112.5 83 66.3
Sc17g0006590 Simmondsia chinensis HOM05D004656 ORTHO05D005404 2.3e-23 112.5 91 61.5
A01p12840 Brassica napus HOM05D004656 ORTHO05D005404 3.0e-23 112.1 75 69.3
BraA01t01228Z Brassica rapa HOM05D004656 ORTHO05D005404 3.0e-23 112.1 75 69.3
Cpa.g.sc27.117 Carica papaya HOM05D004656 ORTHO05D005404 3.0e-23 112.1 65 81.5
HanXRQChr17g0551051 Helianthus annuus HOM05D004656 ORTHO05D005404 3.0e-23 112.1 78 67.9
AUR62014723 Chenopodium quinoa HOM05D004656 ORTHO05D005404 5.1e-23 111.3 76 67.1
AUR62016904 Chenopodium quinoa HOM05D004656 ORTHO05D005404 1.1e-22 110.2 76 67.1
Migut.E00415 Erythranthe guttata HOM05D004656 ORTHO05D005404 1.9e-22 109.4 83 65.1
Thhalv10024471m.g Eutrema salsugineum HOM05D004656 ORTHO05D005404 2.5e-22 109.0 75 66.7
Lsat_1_v5_gn_4_57080 Lactuca sativa HOM05D004656 ORTHO05D005404 2.5e-22 109.0 83 65.1
Sp7g19640 Schrenkiella parvula HOM05D004656 ORTHO05D005404 2.5e-22 109.0 75 68.0
BcaNung02790 Brassica carinata HOM05D004656 ORTHO05D005404 3.3e-22 108.6 75 68.0
AT4G21530 Arabidopsis thaliana HOM05D004656 ORTHO05D005404 4.3e-22 108.2 75 66.7
BcaNung02789 Brassica carinata HOM05D004656 ORTHO05D005404 4.3e-22 108.2 75 68.0
C01p15460 Brassica napus HOM05D004656 ORTHO05D005404 4.3e-22 108.2 75 68.0
BolC1t01500H Brassica oleracea HOM05D004656 ORTHO05D005404 4.3e-22 108.2 75 68.0
Carub.0007s1989 Capsella rubella HOM05D004656 ORTHO05D005404 7.4e-22 107.5 86 62.8
AL7G32500 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 9.7e-22 107.1 75 66.7
CARHR228190 Cardamine hirsuta HOM05D004656 ORTHO05D005404 4.8e-21 104.8 69 71.0
THA.LOC104812734 Tarenaya hassleriana HOM05D004656 ORTHO05D005404 4.8e-21 104.8 76 64.5
Eucgr.E03497 Eucalyptus grandis HOM05D004656 ORTHO05D005404 8.2e-21 104.0 77 63.6
ATR0580G317 Amborella trichopoda HOM05D004656 ORTHO05D005404 1.1e-20 103.6 83 63.9
SalBow7G0840 Salvia bowleyana HOM05D004656 ORTHO05D005404 4.1e-20 101.7 96 58.3
HPP92_015366 Vanilla planifolia HOM05D004656 ORTHO05D005404 4.1e-20 101.7 103 51.5
EL10Ac8g20612 Beta vulgaris HOM05D004656 ORTHO05D005404 6.9e-20 100.9 84 58.3
BcaC09g51334 Brassica carinata HOM05D004656 ORTHO05D005404 2.0e-19 99.4 106 50.0
SalBow7G0885 Salvia bowleyana HOM05D004656 ORTHO05D005404 2.0e-19 99.4 96 57.3
CSS0033314 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 2.6e-19 99.0 72 75.0
CSS0037848 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 2.6e-19 99.0 72 75.0
PGR042G3654 Punica granatum HOM05D004656 ORTHO05D005404 5.9e-19 97.8 76 59.2
BcaC09g51337 Brassica carinata HOM05D004656 ORTHO05D005404 7.7e-19 97.4 75 61.3
BcaC09g51339 Brassica carinata HOM05D004656 ORTHO05D005404 7.7e-19 97.4 75 61.3
Aa31LG6G3550 Aethionema arabicum HOM05D004656 ORTHO05D005404 1.0e-18 97.1 75 61.3
Nitab4.5_0003574g0090 Nicotiana tabacum HOM05D004656 ORTHO05D005404 1.7e-18 96.3 55 80.0
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 2.9e-18 95.5 77 59.7
CDE02G2476 Ceratophyllum demersum HOM05D004656 ORTHO05D005404 6.5e-18 94.4 75 64.0
Eucgr.E01958 Eucalyptus grandis HOM05D004656 ORTHO05D005404 3.2e-17 92.0 77 58.4
SHI02118 Sapria himalayana HOM05D004656 ORTHO05D005404 2.1e-16 89.4 76 57.9
ECA234G0402 Erigeron canadensis HOM05D004656 ORTHO05D005404 1.0e-15 87.0 75 60.0
Zm00001eb192820 Zea mays HOM05D004656 ORTHO05D005404 2.3e-15 85.9 86 46.5
MELO3C008912.2 Cucumis melo HOM05D004656 ORTHO05D005404 6.7e-15 84.3 56 73.2
Zm00001eb125490 Zea mays HOM05D004656 ORTHO05D005404 1.5e-14 83.2 95 47.4
unitig_8.g3351 Utricularia gibba HOM05D004656 ORTHO05D005404 3.3e-14 82.0 85 50.6
Zm00001eb384090 Zea mays HOM05D004656 ORTHO05D005404 1.4e-12 76.6 84 46.4
Eucgr.L00388 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.5e-11 73.2 61 60.7
Eucgr.D02667 Eucalyptus grandis HOM05D004656 ORTHO05D005404 2.0e-11 72.8 50 68.0
Eucgr.E03552 Eucalyptus grandis HOM05D004656 ORTHO05D005404 3.8e-10 68.6 50 64.0
Eucgr.E03560 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.1e-09 67.0 50 62.0
Eucgr.C00011 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.4e-09 66.6 50 62.0
Eucgr.E03557 Eucalyptus grandis HOM05D004656 ORTHO05D005404 4.2e-09 65.1 56 55.4
CSS0022791 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 5.5e-09 64.7 73 52.1
Pp3c19_17530 Physcomitrium patens HOM05D004656 ORTHO05D005404 5.5e-09 64.7 95 40.0
Mapoly0038s0098 Marchantia polymorpha HOM05D004656 ORTHO05D005404 3.6e-08 62.0 90 38.9
AagrBONN_evm.TU.Sc2ySwM_117.1500 Anthoceros agrestis HOM05D004656 ORTHO05D005404 7.9e-08 60.8 83 43.4
SMO119G0264 Selaginella moellendorffii HOM05D004656 ORTHO05D005404 1.5e-06 56.6 73 42.5
CBR_g50890 Chara braunii HOM05D004656 ORTHO05D000048 2.0e-06 56.2 96 36.5


User provided reference genes

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