Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002052 Camellia sinensis var. sinensis HOM05D049805 ORTHO05D043320 7.4e-89 330.5 164 100.0
CSS0046413 Camellia sinensis var. sinensis HOM05D049805 ORTHO05D043320 3.0e-66 255.4 135 95.6
TAR636G0479 Trochodendron aralioides HOM05D002702 ORTHO05D003416 2.4e-10 69.7 104 41.3
MBI17_g29780_MAGBIO Magnolia biondii HOM05D002702 ORTHO05D003416 1.5e-09 67.0 91 45.1
ClCG03G016660 Citrullus lanatus HOM05D002702 ORTHO05D003416 4.4e-09 65.5 90 44.4
Nn7g37357 Nelumbo nucifera HOM05D002702 ORTHO05D003416 5.8e-09 65.1 99 42.4
Nitab4.5_0012106g0010 Nicotiana tabacum HOM05D011191 ORTHO05D010786 2.2e-08 63.2 92 40.2
PGR042G0279 Punica granatum HOM05D002702 ORTHO05D003416 2.9e-08 62.8 95 42.1
Lj2g0010098 Lotus japonicus HOM05D002702 ORTHO05D003416 3.8e-08 62.4 66 48.5
PGR031G3358 Punica granatum HOM05D002702 ORTHO05D003416 4.9e-08 62.0 86 43.0
Dinv25037 Davidia involucrata HOM05D002702 ORTHO05D003416 6.4e-08 61.6 58 55.2
Cpa.g.c27574 Carica papaya HOM05D002702 ORTHO05D003416 1.1e-07 60.8 39 69.2
Sed0008593 Sechium edule HOM05D002702 ORTHO05D003416 1.4e-07 60.5 94 38.3
CDE10G0041 Ceratophyllum demersum HOM05D002702 ORTHO05D003416 1.9e-07 60.1 69 46.4
Actinidia07964 Actinidia chinensis HOM05D002702 ORTHO05D003416 2.4e-07 59.7 68 50.0
Nitab4.5_0000406g0150 Nicotiana tabacum HOM05D011191 ORTHO05D010786 2.4e-07 59.7 92 39.1
PSO170G0409 Papaver somniferum HOM05D002702 ORTHO05D003416 2.4e-07 59.7 99 41.4
Eucgr.A02144 Eucalyptus grandis HOM05D002702 ORTHO05D003416 3.2e-07 59.3 40 65.0
Atru.chr2.1532 Acer truncatum HOM05D002702 ORTHO05D003416 4.2e-07 58.9 40 65.0
CsaV3_1G039340 Cucumis sativus L. HOM05D002702 ORTHO05D003416 5.4e-07 58.5 73 47.9
Lj4g0005434 Lotus japonicus HOM05D002702 ORTHO05D003416 5.4e-07 58.5 50 52.0
Sc25g0001160 Simmondsia chinensis HOM05D002702 ORTHO05D003416 5.4e-07 58.5 38 68.4
MELO3C015360.2 Cucumis melo HOM05D002702 ORTHO05D003416 7.1e-07 58.2 41 63.4
Dinv17311 Davidia involucrata HOM05D002702 ORTHO05D003416 7.1e-07 58.2 98 34.7
PSO210G0347 Papaver somniferum HOM05D002702 ORTHO05D003416 7.1e-07 58.2 98 36.7
PSO832G1528 Papaver somniferum HOM05D002702 ORTHO05D003416 7.1e-07 58.2 69 44.9
Peaxi162Scf01419g00119 Petunia axillaris HOM05D011191 ORTHO05D010786 9.3e-07 57.8 134 34.3
Cc02_g13440 Coffea canephora HOM05D002702 ORTHO05D003416 2.7e-06 56.2 37 67.6
Sopen08g022570 Solanum pennellii HOM05D011191 ORTHO05D010786 2.7e-06 56.2 142 29.6
Duzib128G1433 Durio zibethinus HOM05D002702 ORTHO05D003416 4.6e-06 55.5 38 63.2
MSTRG.11791 Avicennia marina HOM05D011191 ORTHO05D010786 6.0e-06 55.1 105 35.2
Potri.009G039100 Populus trichocarpa HOM05D002702 ORTHO05D003416 6.0e-06 55.1 71 43.7
Sed0020965 Sechium edule HOM05D002702 ORTHO05D010786 6.0e-06 55.1 65 47.7
Ciclev10019321m.g Citrus clementina HOM05D002702 ORTHO05D003416 7.8e-06 54.7 69 44.9
Sc13g0009820 Simmondsia chinensis HOM05D002702 ORTHO05D019466 7.8e-06 54.7 64 48.4


User provided reference genes

Program Settings