Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.6e-56 222.6 124 100.0
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 3.0e-34 148.7 122 70.5
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 7.4e-33 144.1 123 69.9
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 4.1e-31 138.3 123 65.0
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 7.0e-31 137.5 123 65.0
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 1.2e-30 136.7 123 64.2
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 2.6e-30 135.6 123 63.4
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 2.6e-30 135.6 123 64.2
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 3.5e-30 135.2 123 63.4
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 3.5e-30 135.2 123 63.4
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 5.9e-30 134.4 121 64.5
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 7.7e-30 134.0 123 62.6
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 1.3e-29 133.3 123 62.6
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 2.9e-29 132.1 123 61.0
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 2.9e-29 132.1 123 61.0
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 5.0e-29 131.3 123 61.0
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 6.5e-29 131.0 123 62.6
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 6.5e-29 131.0 123 61.8
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 8.5e-29 130.6 123 61.0
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 4.2e-28 128.3 123 61.0
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 5.5e-28 127.9 123 60.2
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 5.5e-28 127.9 123 60.2
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 7.2e-28 127.5 142 55.6
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 3.6e-27 125.2 119 59.7
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 4.7e-27 124.8 122 59.0
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 4.7e-27 124.8 124 58.1
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 6.1e-27 124.4 123 58.5
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 6.1e-27 124.4 123 57.7
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 1.0e-26 123.6 124 58.9
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 1.0e-26 123.6 123 57.7
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 1.0e-26 123.6 123 59.3
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 1.0e-26 123.6 121 58.7
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 1.8e-26 122.9 120 59.2
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 2.3e-26 122.5 123 57.7
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 2.3e-26 122.5 122 56.6
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 2.3e-26 122.5 120 59.2
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 3.0e-26 122.1 122 58.2
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 3.0e-26 122.1 123 57.7
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 3.0e-26 122.1 123 55.3
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 4.0e-26 121.7 122 56.6
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 5.2e-26 121.3 123 57.7
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 5.2e-26 121.3 123 57.7
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 5.2e-26 121.3 123 56.9
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 5.2e-26 121.3 122 56.6
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 6.7e-26 120.9 122 58.2
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 6.7e-26 120.9 123 55.3
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 8.8e-26 120.6 122 59.8
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 8.8e-26 120.6 122 59.8
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 8.8e-26 120.6 122 60.7
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 8.8e-26 120.6 123 55.3
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 1.1e-25 120.2 122 59.8
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 1.1e-25 120.2 122 59.8
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 1.1e-25 120.2 122 55.7
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.5e-25 119.8 123 56.9
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 1.5e-25 119.8 123 57.7
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 2.0e-25 119.4 122 55.7
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 2.0e-25 119.4 122 57.4
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 2.0e-25 119.4 123 55.3
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 2.0e-25 119.4 123 55.3
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 2.6e-25 119.0 122 57.4
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 2.6e-25 119.0 122 59.0
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 2.6e-25 119.0 122 58.2
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 2.6e-25 119.0 123 56.1
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 2.6e-25 119.0 123 56.1
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 2.6e-25 119.0 122 58.2
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 2.6e-25 119.0 121 55.4
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 3.3e-25 118.6 123 54.5
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 3.3e-25 118.6 123 55.3
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 4.4e-25 118.2 123 57.7
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 4.4e-25 118.2 122 57.4
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 4.4e-25 118.2 123 55.3
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 7.5e-25 117.5 123 56.1
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 7.5e-25 117.5 123 56.1
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 9.7e-25 117.1 123 55.3
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 9.7e-25 117.1 122 55.7
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 9.7e-25 117.1 122 55.7
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 1.3e-24 116.7 122 57.4
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 1.3e-24 116.7 123 55.3
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 1.7e-24 116.3 141 48.9
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 2.2e-24 115.9 122 56.6
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 2.2e-24 115.9 123 52.0
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 2.8e-24 115.5 123 52.0
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 2.8e-24 115.5 122 55.7
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 2.8e-24 115.5 122 54.1
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 1.8e-23 112.8 122 54.9
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 2.4e-23 112.5 123 50.4
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 3.1e-23 112.1 122 54.1
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 7.7e-22 107.5 123 48.8
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 1.0e-21 107.1 121 49.6
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 1.1e-20 103.6 121 50.4
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 1.9e-20 102.8 134 48.5
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 5.5e-20 101.3 123 48.0
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 5.5e-20 101.3 123 48.0
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 5.5e-20 101.3 115 47.8
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 7.2e-20 100.9 91 57.1
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 1.2e-17 93.6 123 51.2
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 4.4e-17 91.7 91 52.7
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 5.7e-17 91.3 88 55.7
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 1.8e-15 86.3 87 59.8
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 1.2e-14 83.6 126 41.3
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 1.7e-13 79.7 87 55.2
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 2.2e-13 79.3 125 38.4
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 1.9e-12 76.3 49 79.6
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 5.5e-12 74.7 126 35.7
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 9.4e-12 73.9 127 34.6
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 8.8e-10 67.4 49 71.4
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 2.6e-09 65.9 86 44.2
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 4.9e-08 61.6 58 58.6


User provided reference genes

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