Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002011 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 7.8e-56 220.3 118 100.0
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 1.7e-50 202.6 118 88.1
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 1.4e-49 199.5 118 86.4
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 5.4e-49 197.6 118 84.7
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 7.0e-49 197.2 118 84.7
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 9.2e-49 196.8 118 86.4
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 2.0e-48 195.7 118 84.7
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 3.5e-48 194.9 118 87.3
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 6.0e-48 194.1 118 83.9
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 6.0e-48 194.1 118 82.2
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 7.8e-48 193.7 118 83.1
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 7.8e-48 193.7 118 84.7
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 7.8e-48 193.7 118 84.7
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 7.8e-48 193.7 118 84.7
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 7.8e-48 193.7 118 84.7
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 7.8e-48 193.7 118 84.7
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 7.8e-48 193.7 118 84.7
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 7.8e-48 193.7 118 84.7
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 1.0e-47 193.4 118 83.9
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 1.3e-47 193.0 118 85.6
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 1.7e-47 192.6 117 82.1
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 5.0e-47 191.0 118 83.1
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 5.0e-47 191.0 118 83.1
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 5.0e-47 191.0 118 83.9
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 6.6e-47 190.7 118 82.2
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 1.1e-46 189.9 117 79.5
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 1.1e-46 189.9 118 84.7
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 1.1e-46 189.9 118 84.7
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 1.1e-46 189.9 118 83.1
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 1.5e-46 189.5 118 82.2
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.9e-46 189.1 118 82.2
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 3.3e-46 188.3 117 79.5
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 3.3e-46 188.3 118 82.2
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 3.3e-46 188.3 117 86.3
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 3.3e-46 188.3 118 83.1
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 4.3e-46 188.0 117 79.5
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 7.3e-46 187.2 118 82.2
Actinidia31860 Actinidia chinensis HOM05D004948 ORTHO05D005824 9.5e-46 186.8 118 82.2
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 9.5e-46 186.8 118 80.5
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 9.5e-46 186.8 118 83.9
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 1.2e-45 186.4 118 80.5
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 1.2e-45 186.4 118 83.9
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 2.1e-45 185.7 118 83.1
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 2.1e-45 185.7 118 79.7
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 2.8e-45 185.3 118 80.5
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 3.6e-45 184.9 118 78.0
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 4.7e-45 184.5 118 78.0
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 4.7e-45 184.5 118 78.8
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 4.7e-45 184.5 118 81.4
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 6.2e-45 184.1 118 80.5
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 1.4e-44 183.0 118 77.1
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 1.8e-44 182.6 117 82.1
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 2.3e-44 182.2 108 87.0
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 3.1e-44 181.8 118 76.3
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 5.2e-44 181.0 118 79.7
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 5.2e-44 181.0 120 78.3
TWI39G0355 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 6.8e-44 180.6 118 78.0
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 8.9e-44 180.3 118 77.1
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 8.9e-44 180.3 118 77.1
Cc02_g01980 Coffea canephora HOM05D004948 ORTHO05D005824 1.2e-43 179.9 118 81.4
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 2.6e-43 178.7 108 82.4
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 3.4e-43 178.3 118 75.4
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 4.4e-43 177.9 117 75.2
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 4.4e-43 177.9 133 72.9
Gohir.A09G183400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 4.4e-43 177.9 117 75.2
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 5.8e-43 177.6 118 75.4
Gohir.D09G178100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 7.5e-43 177.2 117 75.2
Gorai.006G200200 Gossypium raimondii HOM05D004948 ORTHO05D005824 7.5e-43 177.2 117 75.2
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 9.8e-43 176.8 117 74.4
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 9.8e-43 176.8 118 75.4
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 1.3e-42 176.4 108 83.3
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 1.7e-42 176.0 108 83.3
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 2.2e-42 175.6 118 72.9
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 2.9e-42 175.3 118 72.9
Ca_16670_v3 Cicer arietinum L. HOM05D004948 ORTHO05D005824 2.9e-42 175.3 118 74.6
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 2.9e-42 175.3 117 73.5
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 3.7e-42 174.9 117 75.2
Lj1g0003063 Lotus japonicus HOM05D004948 ORTHO05D005824 3.7e-42 174.9 118 73.7
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 4.9e-42 174.5 118 72.9
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 4.9e-42 174.5 117 75.2
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 6.4e-42 174.1 118 75.4
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 8.3e-42 173.7 117 73.5
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 1.9e-41 172.6 118 74.6
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 1.9e-41 172.6 118 72.0
Ah.07g206090 Amaranthus hybridus HOM05D004948 ORTHO05D005824 2.4e-41 172.2 117 74.4
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 2.4e-41 172.2 118 72.0
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 3.2e-41 171.8 118 72.0
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 4.1e-41 171.4 118 71.2
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 4.1e-41 171.4 118 71.2
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 5.4e-41 171.0 118 72.0
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 7.1e-41 170.6 118 72.0
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 7.1e-41 170.6 118 71.2
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 1.6e-40 169.5 118 72.0
Aa31LG3G9220 Aethionema arabicum HOM05D004948 ORTHO05D005824 2.7e-40 168.7 118 67.8
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 2.7e-40 168.7 118 72.9
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 3.5e-40 168.3 108 80.6
BcaC03g14431 Brassica carinata HOM05D004948 ORTHO05D005824 6.0e-40 167.5 112 72.3
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 6.0e-40 167.5 112 72.3
C02p18470 Brassica napus HOM05D004948 ORTHO05D005824 6.0e-40 167.5 112 72.3
BolC2t07987H Brassica oleracea HOM05D004948 ORTHO05D005824 6.0e-40 167.5 112 72.3
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 6.0e-40 167.5 112 72.3
Psat0s97g0080 Pisum sativum HOM05D004948 ORTHO05D005824 6.0e-40 167.5 118 70.3
Os01g0621700 Oryza sativa ssp. japonica HOM05D004948 ORTHO05D005824 1.3e-39 166.4 117 68.4
TPR.G33862 Trifolium pratense HOM05D004948 ORTHO05D005824 1.7e-39 166.0 118 69.5
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 2.3e-39 165.6 117 73.5
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 2.3e-39 165.6 117 73.5
Actinidia08617 Actinidia chinensis HOM05D004948 ORTHO05D005824 3.0e-39 165.2 118 78.8
Zm00001eb432120 Zea mays HOM05D004948 ORTHO05D005824 3.0e-39 165.2 117 70.1
Glyma.04G238900 Glycine max HOM05D004948 ORTHO05D005824 3.9e-39 164.9 118 72.9
HPP92_024433 Vanilla planifolia HOM05D004948 ORTHO05D005824 5.1e-39 164.5 117 66.7
Nitab4.5_0002176g0030 Nicotiana tabacum HOM05D004948 ORTHO05D005824 6.6e-39 164.1 107 77.6
arahy.Tifrunner.gnm1.ann1.NIM4HJ Arachis hypogaea HOM05D004948 ORTHO05D005824 1.1e-38 163.3 118 68.6
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 1.5e-38 162.9 117 70.1
Glyma.06G124800 Glycine max HOM05D004948 ORTHO05D005824 1.5e-38 162.9 118 72.9
CAN.G204.5 Capsicum annuum HOM05D004948 ORTHO05D005824 1.9e-38 162.5 118 68.6
Lalb_Chr08g0240671 Lupinus albus HOM05D004948 ORTHO05D005824 1.9e-38 162.5 118 72.0
Phvul.009G135700 Phaseolus vulgaris HOM05D004948 ORTHO05D005824 1.9e-38 162.5 118 70.3
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 1.6e-37 159.5 110 74.5
DCAR_014528 Daucus carota HOM05D000121 ORTHO05D005824 1.8e-36 156.0 114 67.5
VMungo1309G3087 Vigna mungo HOM05D004948 ORTHO05D005824 3.1e-36 155.2 118 64.4
Lj1P1012T60 Lonicera japonica HOM05D004948 ORTHO05D005824 6.8e-36 154.1 108 72.2
arahy.Tifrunner.gnm1.ann1.AMC2P5 Arachis hypogaea HOM05D004948 ORTHO05D005824 1.5e-35 152.9 133 60.9
DCAR_008996 Daucus carota HOM05D002473 ORTHO05D005824 1.5e-35 152.9 114 68.4
SEGI_09652 Sequoiadendron giganteum HOM05D004948 ORTHO05D005824 1.5e-35 152.9 118 66.9
unitig_747.g21853 Utricularia gibba HOM05D004948 ORTHO05D005824 2.0e-35 152.5 118 69.5
Medtr3g090670 Medicago truncatula HOM05D004948 ORTHO05D005824 7.6e-35 150.6 108 69.4
SHI54648 Sapria himalayana HOM05D004948 ORTHO05D005824 4.9e-34 147.9 111 68.5
SHI54754 Sapria himalayana HOM05D004948 ORTHO05D005824 4.9e-34 147.9 111 68.5
CDE04G0161 Ceratophyllum demersum HOM05D004948 ORTHO05D005824 8.4e-34 147.1 118 61.9
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 5.4e-33 144.4 87 83.9
CSS0025713 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.6e-32 142.9 87 82.8
CSS0008262 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 4.6e-32 141.4 87 81.6
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 1.3e-31 139.8 87 81.6
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 1.7e-31 139.4 87 80.5
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 3.0e-31 138.7 87 81.6
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 3.3e-30 135.2 87 77.0
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 6.2e-29 131.0 87 74.7
Mapoly0143s0028 Marchantia polymorpha HOM05D004948 ORTHO05D005824 2.2e-26 122.5 118 57.6
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 3.2e-25 118.6 121 55.4
AagrBONN_evm.TU.Sc2ySwM_362.1882 Anthoceros agrestis HOM05D004948 ORTHO05D005824 5.4e-25 117.9 112 55.4
CBR_g39340 Chara braunii HOM05D004948 ORTHO05D005824 2.1e-24 115.9 115 53.9
SMO361G0401 Selaginella moellendorffii HOM05D004948 ORTHO05D005824 1.7e-23 112.8 108 56.5
BcaC04g20470 Brassica carinata HOM05D004948 ORTHO05D005824 3.0e-23 112.1 118 53.4
BolC9t57186H Brassica oleracea HOM05D004948 ORTHO05D005824 6.6e-23 110.9 118 53.4
C09p43150 Brassica napus HOM05D004948 ORTHO05D005824 4.8e-21 104.8 108 53.7
Lalb_Chr23g0271431 Lupinus albus HOM05D004948 ORTHO05D005824 1.2e-16 90.1 68 67.6
MCO05G504 Micromonas commoda HOM05D004948 ORTHO05D005824 3.5e-08 62.0 138 32.6
CSS0033495 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 3.3e-06 55.5 30 93.3


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