Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002010 Camellia sinensis var. sinensis HOM05D002237 ORTHO05D002213 2.2e-78 296.2 237 100.0
Dinv36772 Davidia involucrata HOM05D002237 ORTHO05D002213 2.3e-22 110.2 227 39.6
Oeu041234.1 Olea europaea HOM05D002237 ORTHO05D002213 4.2e-16 89.4 221 33.5
Hma1.2p1_0798F.1_g219850 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 9.3e-16 88.2 245 40.0
Actinidia25249 Actinidia chinensis HOM05D002237 ORTHO05D002213 4.6e-15 85.9 283 29.3
CSS0026514 Camellia sinensis var. sinensis HOM05D002237 ORTHO05D002213 1.6e-12 77.4 243 30.0
CSS0010318 Camellia sinensis var. sinensis HOM05D002237 ORTHO05D002213 8.1e-12 75.1 162 53.1
Manes.16G101500 Manihot esculenta HOM05D002237 ORTHO05D002213 1.1e-11 74.7 155 38.1
Actinidia39713 Actinidia chinensis HOM05D002237 ORTHO05D002213 1.4e-11 74.3 282 28.4
Hma1.2p1_0482F.1_g162400 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 3.1e-11 73.2 288 26.7
Actinidia39714 Actinidia chinensis HOM05D002237 ORTHO05D002213 9.0e-11 71.6 274 27.4
CANSAT25G0876 Cannabis sativa HOM05D002237 ORTHO05D002213 1.5e-10 70.9 306 30.4
Cc06_g11460 Coffea canephora HOM05D002237 ORTHO05D002213 3.4e-10 69.7 229 30.1
Hma1.2p1_0798F.1_g219880 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 4.4e-10 69.3 205 30.7
MSTRG.6063 Avicennia marina HOM05D002237 ORTHO05D002213 9.9e-10 68.2 236 28.4
CiPaw.03G215600 Carya illinoinensis HOM05D002237 ORTHO05D002213 1.3e-09 67.8 157 36.9
CiPaw.03G215700 Carya illinoinensis HOM05D002237 ORTHO05D002213 1.3e-09 67.8 251 31.5
Nitab4.5_0003648g0010 Nicotiana tabacum HOM05D002237 ORTHO05D002213 1.3e-09 67.8 258 28.3
Dinv22895 Davidia involucrata HOM05D002237 ORTHO05D002213 1.7e-09 67.4 291 32.0
Dinv27989 Davidia involucrata HOM05D002237 ORTHO05D002213 2.2e-09 67.0 287 26.5
PSO210G1183 Papaver somniferum HOM05D002237 ORTHO05D002213 2.2e-09 67.0 257 28.8
Rhsim05G0020400 Rhododendron simsii HOM05D002237 ORTHO05D002213 2.2e-09 67.0 293 32.8
CiPaw.04G149200 Carya illinoinensis HOM05D002237 ORTHO05D002213 2.9e-09 66.6 158 35.4
Oeu041232.1 Olea europaea HOM05D002237 ORTHO05D002213 2.9e-09 66.6 231 30.7
Peaxi162Scf01461g00029 Petunia axillaris HOM05D002237 ORTHO05D002213 3.8e-09 66.2 258 28.3
PSO210G3168 Papaver somniferum HOM05D002237 ORTHO05D002213 4.9e-09 65.9 256 28.5
PSO210G0663 Papaver somniferum HOM05D002237 ORTHO05D002213 6.4e-09 65.5 256 28.1
CSS0012916 Camellia sinensis var. sinensis HOM05D002237 ORTHO05D002213 8.4e-09 65.1 272 33.1
MD15G1207800 Malus domestica HOM05D002237 ORTHO05D002213 8.4e-09 65.1 157 36.3
Nitab4.5_0000095g0170 Nicotiana tabacum HOM05D002237 ORTHO05D002213 1.1e-08 64.7 260 28.1
PGR142G4283 Punica granatum HOM05D002237 ORTHO05D002213 1.1e-08 64.7 153 41.2
TWI34G0810 Tripterygium wilfordii HOM05D002237 ORTHO05D002213 1.9e-08 63.9 294 24.8
Gorai.010G100300 Gossypium raimondii HOM05D002237 ORTHO05D002213 2.4e-08 63.5 312 24.7
Gohir.A06G087500 Gossypium hirsutum HOM05D002237 ORTHO05D002213 4.2e-08 62.8 311 26.0
Nn8g38853 Nelumbo nucifera HOM05D002237 ORTHO05D002213 5.4e-08 62.4 255 28.6
Actinidia26073 Actinidia chinensis HOM05D002237 ORTHO05D002213 7.1e-08 62.0 269 27.9
SalBow4G0805 Salvia bowleyana HOM05D002237 ORTHO05D002213 7.1e-08 62.0 291 27.8
Gohir.D06G086900 Gossypium hirsutum HOM05D002237 ORTHO05D002213 9.3e-08 61.6 311 24.4
Oeu041236.1 Olea europaea HOM05D002237 ORTHO05D002213 9.3e-08 61.6 221 40.7
Eucgr.C00886 Eucalyptus grandis HOM05D002237 ORTHO05D002213 1.2e-07 61.2 169 34.3
COL.COLO4_21062 Corchorus olitorius HOM05D002237 ORTHO05D002213 1.6e-07 60.8 228 27.6
Duzib150G1021 Durio zibethinus HOM05D002237 ORTHO05D002213 1.6e-07 60.8 326 25.2
Oeu006001.1 Olea europaea HOM05D002237 ORTHO05D002213 1.6e-07 60.8 37 75.7
Oeu041228.1 Olea europaea HOM05D002237 ORTHO05D002213 1.6e-07 60.8 229 29.3
vmacro17244 Vaccinium macrocarpon HOM05D002237 ORTHO05D002213 1.6e-07 60.8 291 30.2
Prupe.7G209100 Prunus persica HOM05D002237 ORTHO05D002213 2.7e-07 60.1 273 25.3
DCAR_000797 Daucus carota HOM05D002237 ORTHO05D002213 3.5e-07 59.7 273 25.6
Manes.03G034300 Manihot esculenta HOM05D002237 ORTHO05D002213 3.5e-07 59.7 265 26.4
FvH4_2g31830 Fragaria vesca HOM05D002237 ORTHO05D002213 6.0e-07 58.9 34 76.5
FAN24G2308 Fragaria x ananassa HOM05D002237 ORTHO05D002213 6.0e-07 58.9 34 76.5
Oeu016763.1 Olea europaea HOM05D002237 ORTHO05D002213 6.0e-07 58.9 37 73.0
A02p08820 Brassica napus HOM05D002237 ORTHO05D002213 7.9e-07 58.5 157 35.0
BolC9t57710H Brassica oleracea HOM05D002237 ORTHO05D002213 7.9e-07 58.5 155 35.5
BraA02t05949Z Brassica rapa HOM05D002237 ORTHO05D002213 7.9e-07 58.5 157 35.0
CAN.G352.21 Capsicum annuum HOM05D002237 ORTHO05D002213 7.9e-07 58.5 324 28.7
PGR031G2556 Punica granatum HOM05D002237 ORTHO05D002213 7.9e-07 58.5 37 73.0
TAR626G0565 Trochodendron aralioides HOM05D001162 ORTHO05D001218 7.9e-07 58.5 37 70.3
BcaC04g20033 Brassica carinata HOM05D002237 ORTHO05D002213 1.0e-06 58.2 155 35.5
Ciclev10008860m.g Citrus clementina HOM05D002237 ORTHO05D002213 1.0e-06 58.2 37 70.3
MBI04_g31172_MAGBIO Magnolia biondii HOM05D002237 ORTHO05D002213 1.0e-06 58.2 34 79.4
Nn6g35487 Nelumbo nucifera HOM05D002237 ORTHO05D002213 1.0e-06 58.2 238 32.4
Thhalv10013847m.g Eutrema salsugineum HOM05D002237 ORTHO05D002213 1.3e-06 57.8 157 35.7
Solyc08g065150.1 Solanum lycopersicum HOM05D002237 ORTHO05D002213 1.3e-06 57.8 103 41.7
Sopen08g018730 Solanum pennellii HOM05D002237 ORTHO05D002213 1.3e-06 57.8 103 41.7
SGA_v2.0_scaffold62G21613 Striga asiatica HOM05D002237 ORTHO05D002213 1.3e-06 57.8 37 70.3
Oeu041233.1 Olea europaea HOM05D002237 ORTHO05D002213 1.7e-06 57.4 219 29.2
BcaB08g36030 Brassica carinata HOM05D002237 ORTHO05D002213 2.3e-06 57.0 155 33.5
A10p14300 Brassica napus HOM05D002237 ORTHO05D002213 2.3e-06 57.0 155 34.8
BraA10t43521Z Brassica rapa HOM05D002237 ORTHO05D002213 2.3e-06 57.0 155 34.8
HanXRQChr07g0192621 Helianthus annuus HOM05D002237 ORTHO05D002213 2.3e-06 57.0 37 70.3
Hma1.2p1_1051F.1_g252130 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 2.3e-06 57.0 36 69.4
Nitab4.5_0001367g0050 Nicotiana tabacum HOM05D002237 ORTHO05D002213 2.3e-06 57.0 117 37.6
FvH4_1g07560 Fragaria vesca HOM05D002237 ORTHO05D002213 3.0e-06 56.6 33 78.8
FAN19G3195 Fragaria x ananassa HOM05D002237 ORTHO05D002213 3.0e-06 56.6 33 78.8
FAN23G1561 Fragaria x ananassa HOM05D002237 ORTHO05D002213 3.0e-06 56.6 33 78.8
FAN26G0211 Fragaria x ananassa HOM05D002237 ORTHO05D002213 3.0e-06 56.6 33 78.8
FAN26G2487 Fragaria x ananassa HOM05D002237 ORTHO05D002213 3.0e-06 56.6 33 78.8
Gohir.A07G011600 Gossypium hirsutum HOM05D002237 ORTHO05D002213 3.0e-06 56.6 32 81.2
Gohir.D07G011400 Gossypium hirsutum HOM05D002237 ORTHO05D002213 3.0e-06 56.6 32 81.2
Gorai.001G012100 Gossypium raimondii HOM05D002237 ORTHO05D002213 3.0e-06 56.6 32 81.2
TAR636G2243 Trochodendron aralioides HOM05D002237 ORTHO05D002213 3.0e-06 56.6 34 76.5
MBI04_g31169_MAGBIO Magnolia biondii HOM05D002237 ORTHO05D002213 3.9e-06 56.2 159 34.0
Cpa.g.sc61.39 Carica papaya HOM05D002237 ORTHO05D002213 5.1e-06 55.8 32 81.2
Glyma.09G063300 Glycine max HOM05D002237 ORTHO05D002213 5.1e-06 55.8 33 75.8
Glyma.15G170100 Glycine max HOM05D002237 ORTHO05D002213 5.1e-06 55.8 33 75.8
Rhsim11G0044000 Rhododendron simsii HOM05D002237 ORTHO05D002213 5.1e-06 55.8 37 64.9
SalBow6G1974 Salvia bowleyana HOM05D002237 ORTHO05D002213 5.1e-06 55.8 38 65.8
Sp6g18690 Schrenkiella parvula HOM05D002237 ORTHO05D002213 5.1e-06 55.8 155 36.1
PGSC0003DMG400035559 Solanum tuberosum HOM05D002237 ORTHO05D002213 5.1e-06 55.8 119 42.9
TWI63G0889 Tripterygium wilfordii HOM05D002237 ORTHO05D002213 5.1e-06 55.8 313 28.1
MSTRG.19510 Avicennia marina HOM05D002237 ORTHO05D002213 6.6e-06 55.5 222 28.8
COL.COLO4_18195 Corchorus olitorius HOM05D002237 ORTHO05D002213 6.6e-06 55.5 32 78.1
Migut.E01567 Erythranthe guttata HOM05D002237 ORTHO05D002213 6.6e-06 55.5 313 28.1
Migut.J00621 Erythranthe guttata HOM05D002237 ORTHO05D002213 6.6e-06 55.5 246 37.0
Hma1.2p1_0163F.1_g073030 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 6.6e-06 55.5 37 64.9
Hma1.2p1_2410F.1_g321555 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 6.6e-06 55.5 37 64.9
MD08G1062500 Malus domestica HOM05D002237 ORTHO05D002213 6.6e-06 55.5 278 24.8
Peaxi162Scf01444g00003 Petunia axillaris HOM05D002237 ORTHO05D002213 6.6e-06 55.5 34 73.5
Potri.018G053000 Populus trichocarpa HOM05D002237 ORTHO05D002213 6.6e-06 55.5 113 48.7
Sopen05g016140 Solanum pennellii HOM05D002237 ORTHO05D002213 6.6e-06 55.5 216 29.2
Thecc.09G088400 Theobroma cacao HOM05D002237 ORTHO05D002213 6.6e-06 55.5 32 78.1
TAR624G1451 Trochodendron aralioides HOM05D002237 ORTHO05D002213 6.6e-06 55.5 33 78.8
Aa31LG3G12870 Aethionema arabicum HOM05D002237 ORTHO05D002213 8.7e-06 55.1 156 34.0
Aqoxy7G01205 Aquilegia oxysepala HOM05D002237 ORTHO05D002213 8.7e-06 55.1 276 26.1
Cfa009978 Carpinus fangiana HOM05D002237 ORTHO05D002213 8.7e-06 55.1 37 67.6
Cfa018473 Carpinus fangiana HOM05D002237 ORTHO05D002213 8.7e-06 55.1 37 67.6
CiPaw.15G038600 Carya illinoinensis HOM05D002237 ORTHO05D002213 8.7e-06 55.1 34 70.6
DCAR_030907 Daucus carota HOM05D002237 ORTHO05D002213 8.7e-06 55.1 34 73.5
FAN28G1161 Fragaria x ananassa HOM05D002237 ORTHO05D002213 8.7e-06 55.1 33 75.8
Sc09g0009840 Simmondsia chinensis HOM05D002237 ORTHO05D002213 8.7e-06 55.1 234 25.6
GSVIVG01023189001 Vitis vinifera HOM05D000101 ORTHO05D002559 8.7e-06 55.1 37 64.9


User provided reference genes

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