Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001946 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 7.5e-155 550.4 269 100.0
CSS0025965 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 4.0e-132 474.9 238 98.3
Actinidia06358 Actinidia chinensis HOM05D004681 ORTHO05D005541 8.6e-119 430.6 237 86.5
Actinidia22469 Actinidia chinensis HOM05D004681 ORTHO05D005541 1.6e-117 426.4 237 84.8
Dinv26443 Davidia involucrata HOM05D004681 ORTHO05D005541 2.4e-113 412.5 238 81.9
Dinv25404 Davidia involucrata HOM05D004681 ORTHO05D005541 3.9e-111 405.2 238 79.4
Rhsim13G0200500 Rhododendron simsii HOM05D004681 ORTHO05D005541 2.1e-109 399.4 285 70.5
GSVIVG01010902001 Vitis vinifera HOM05D004681 ORTHO05D005541 4.4e-107 391.7 233 76.0
Cc06_g22600 Coffea canephora HOM05D004681 ORTHO05D005541 9.3e-105 384.0 232 75.9
Solyc07g009320.3 Solanum lycopersicum HOM05D004681 ORTHO05D005541 2.3e-103 379.4 232 75.4
Sopen07g005070 Solanum pennellii HOM05D004681 ORTHO05D005541 2.3e-103 379.4 232 75.4
PGSC0003DMG400008514 Solanum tuberosum HOM05D004681 ORTHO05D005541 2.5e-102 375.9 232 74.6
Nitab4.5_0000074g0040 Nicotiana tabacum HOM05D004681 ORTHO05D005541 8.1e-101 370.9 232 73.7
SalBow7G3904 Salvia bowleyana HOM05D004681 ORTHO05D005541 1.1e-100 370.5 232 75.4
MSTRG.10452 Avicennia marina HOM05D004681 ORTHO05D005541 2.4e-100 369.4 232 73.3
CiPaw.07G195100 Carya illinoinensis HOM05D004681 ORTHO05D005541 3.1e-100 369.0 232 75.4
Nitab4.5_0010281g0010 Nicotiana tabacum HOM05D004681 ORTHO05D005541 4.0e-100 368.6 232 73.3
Cfa013431 Carpinus fangiana HOM05D004681 ORTHO05D005541 6.9e-100 367.9 232 74.6
HanXRQChr09g0266261 Helianthus annuus HOM05D004681 ORTHO05D005541 1.2e-99 367.1 232 73.3
Duzib170G0205 Durio zibethinus HOM05D004681 ORTHO05D005541 2.0e-99 366.3 232 73.7
Thecc.09G181200 Theobroma cacao HOM05D004681 ORTHO05D005541 2.0e-99 366.3 232 75.0
TWI63G0533 Tripterygium wilfordii HOM05D004681 ORTHO05D005541 3.4e-99 365.5 232 73.3
CAN.G1668.9 Capsicum annuum HOM05D004681 ORTHO05D005541 9.9e-99 364.0 232 72.8
Duzib168G0714 Durio zibethinus HOM05D004681 ORTHO05D005541 1.3e-98 363.6 233 73.8
Oeu000976.1 Olea europaea HOM05D004681 ORTHO05D005541 1.3e-98 363.6 232 74.6
Cpa.g.sc95.29 Carica papaya HOM05D004681 ORTHO05D005541 1.7e-98 363.2 232 72.4
SGA_v2.0_scaffold41G15864 Striga asiatica HOM05D004681 ORTHO05D005541 4.9e-98 361.7 232 72.8
Prupe.1G079200 Prunus persica HOM05D004681 ORTHO05D005541 8.4e-98 360.9 232 71.1
Peaxi162Scf00324g00718 Petunia axillaris HOM05D004681 ORTHO05D005541 1.9e-97 359.8 229 71.6
Gohir.D08G028500 Gossypium hirsutum HOM05D004681 ORTHO05D005541 3.2e-97 359.0 232 72.0
Atru.chr7.819 Acer truncatum HOM05D004681 ORTHO05D005541 4.2e-97 358.6 231 71.9
RcHm_v2.0_Chr4g0400191 Rosa chinensis HOM05D004681 ORTHO05D005541 4.2e-97 358.6 232 72.0
Sc14g0001370 Simmondsia chinensis HOM05D004681 ORTHO05D005541 5.4e-97 358.2 233 71.2
Gohir.A08G017900 Gossypium hirsutum HOM05D004681 ORTHO05D005541 9.3e-97 357.5 232 72.0
CiPaw.08G033800 Carya illinoinensis HOM05D004681 ORTHO05D005541 4.6e-96 355.1 232 73.3
Eucgr.C00132 Eucalyptus grandis HOM05D004681 ORTHO05D005541 6.0e-96 354.8 233 70.8
PGR044G2653 Punica granatum HOM05D004681 ORTHO05D005541 6.0e-96 354.8 232 71.6
Ciclev10008916m.g Citrus clementina HOM05D004681 ORTHO05D005541 1.0e-95 354.0 237 69.6
SalBow7G0268 Salvia bowleyana HOM05D004681 ORTHO05D005541 1.3e-95 353.6 241 71.4
MD13G1245600 Malus domestica HOM05D004681 ORTHO05D005541 2.3e-95 352.8 232 69.8
Migut.L01897 Erythranthe guttata HOM05D004681 ORTHO05D005541 6.7e-95 351.3 232 71.6
Gorai.004G025600 Gossypium raimondii HOM05D004681 ORTHO05D005541 1.1e-94 350.5 243 68.7
QL12p032381 Quercus lobata HOM05D004681 ORTHO05D005541 1.1e-94 350.5 233 70.0
Lsat_1_v5_gn_4_183080 Lactuca sativa HOM05D004681 ORTHO05D005541 2.5e-94 349.4 232 72.0
CANSAT11G1051 Cannabis sativa HOM05D004681 ORTHO05D005541 3.3e-94 349.0 232 70.3
Aqoxy7G02735 Aquilegia oxysepala HOM05D004681 ORTHO05D005541 4.3e-94 348.6 235 69.4
Sed0004411 Sechium edule HOM05D004681 ORTHO05D005541 7.4e-94 347.8 247 66.4
ECA232G3088 Erigeron canadensis HOM05D004681 ORTHO05D005541 2.1e-93 346.3 235 69.4
Manes.14G161401 Manihot esculenta HOM05D004681 ORTHO05D005541 4.8e-93 345.1 232 69.8
FAN12G2798 Fragaria x ananassa HOM05D004681 ORTHO05D005541 6.2e-93 344.7 235 70.6
FAN22G1928 Fragaria x ananassa HOM05D004681 ORTHO05D005541 8.1e-93 344.4 235 70.6
FAN17G0253 Fragaria x ananassa HOM05D004681 ORTHO05D005541 1.4e-92 343.6 235 70.6
HanXRQChr10g0297571 Helianthus annuus HOM05D004681 ORTHO05D005541 1.4e-92 343.6 232 70.3
Manes.04G060300 Manihot esculenta HOM05D004681 ORTHO05D005541 1.4e-92 343.6 232 69.4
FvH4_4g07590 Fragaria vesca HOM05D004681 ORTHO05D005541 2.4e-92 342.8 235 70.6
RcHm_v2.0_Chr7g0191541 Rosa chinensis HOM05D004681 ORTHO05D005541 5.3e-92 341.7 232 68.5
CsaV3_1G031790 Cucumis sativus L. HOM05D004681 ORTHO05D005541 1.2e-91 340.5 233 68.7
Potri.018G145508 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.2e-91 340.5 231 69.7
MELO3C017439.2 Cucumis melo HOM05D004681 ORTHO05D005541 4.5e-91 338.6 233 68.2
AUR62033246 Chenopodium quinoa HOM05D004681 ORTHO05D005541 7.6e-91 337.8 233 66.5
Potri.006G077100 Populus trichocarpa HOM05D004681 ORTHO05D005541 7.6e-91 337.8 231 70.1
BcaB07g31622 Brassica carinata HOM05D004681 ORTHO05D005541 9.9e-91 337.4 231 67.1
ClCG06G013520 Citrullus lanatus HOM05D004681 ORTHO05D005541 2.2e-90 336.3 234 66.2
Ah.09g230170 Amaranthus hybridus HOM05D004681 ORTHO05D005541 1.4e-89 333.6 233 67.0
PSO079G0045 Papaver somniferum HOM05D004681 ORTHO05D005541 1.9e-89 333.2 233 69.1
MBI13_g31546_MAGBIO Magnolia biondii HOM05D004681 ORTHO05D005541 2.4e-89 332.8 240 65.8
BcaB03g16704 Brassica carinata HOM05D004681 ORTHO05D005541 7.1e-89 331.3 229 66.4
BcaC04g22869 Brassica carinata HOM05D004681 ORTHO05D005541 7.1e-89 331.3 231 65.4
C09p14440 Brassica napus HOM05D004681 ORTHO05D005541 1.2e-88 330.5 229 65.9
PSO423G0181 Papaver somniferum HOM05D004681 ORTHO05D005541 1.6e-88 330.1 234 67.5
Hund09046 Selenicereus undatus HOM05D004681 ORTHO05D005541 1.6e-88 330.1 230 67.0
BcaC06g36518 Brassica carinata HOM05D004681 ORTHO05D005541 3.5e-88 328.9 229 65.1
A09p12190 Brassica napus HOM05D004681 ORTHO05D005541 3.5e-88 328.9 231 64.9
BraA09t36865Z Brassica rapa HOM05D004681 ORTHO05D005541 3.5e-88 328.9 229 65.5
Thhalv10022785m.g Eutrema salsugineum HOM05D004681 ORTHO05D005541 4.6e-88 328.6 231 65.8
AL3G52840 Arabidopsis lyrata HOM05D004681 ORTHO05D005541 7.9e-88 327.8 232 65.9
SGA_v2.0_scaffold21G09637 Striga asiatica HOM05D004681 ORTHO05D005541 7.9e-88 327.8 232 67.2
A07p01650 Brassica napus HOM05D004681 ORTHO05D005541 1.0e-87 327.4 229 64.6
BraA07t27967Z Brassica rapa HOM05D004681 ORTHO05D005541 1.0e-87 327.4 229 64.6
C07p03410 Brassica napus HOM05D004681 ORTHO05D005541 2.3e-87 326.2 229 64.6
BolC7t40740H Brassica oleracea HOM05D004681 ORTHO05D005541 2.3e-87 326.2 229 64.6
Aa31LG8G16140 Aethionema arabicum HOM05D004681 ORTHO05D005541 3.0e-87 325.9 231 64.9
EL10Ac8g18317 Beta vulgaris HOM05D004681 ORTHO05D005541 3.0e-87 325.9 233 65.2
Sp3g32480 Schrenkiella parvula HOM05D004681 ORTHO05D005541 3.0e-87 325.9 229 64.2
BolC9t54347H Brassica oleracea HOM05D004681 ORTHO05D005541 5.1e-87 325.1 232 64.7
THA.LOC104819968 Tarenaya hassleriana HOM05D004681 ORTHO05D005541 5.1e-87 325.1 232 66.4
Sabra06G0058400 Salix brachista HOM05D004681 ORTHO05D005541 1.9e-86 323.2 255 62.4
AT2G19080 Arabidopsis thaliana HOM05D004681 ORTHO05D005541 7.4e-86 321.2 229 65.5
Carub.0003s3332 Capsella rubella HOM05D004681 ORTHO05D005541 7.4e-86 321.2 232 64.2
CARHR109600 Cardamine hirsuta HOM05D004681 ORTHO05D005541 2.1e-85 319.7 265 58.9
ATR0626G278 Amborella trichopoda HOM05D004681 ORTHO05D005541 1.8e-84 316.6 234 63.2
unitig_578.g16069 Utricularia gibba HOM05D004681 ORTHO05D005541 3.1e-84 315.8 232 63.4
Lj7A127G13 Lonicera japonica HOM05D004681 ORTHO05D005541 7.6e-83 311.2 186 76.3
arahy.Tifrunner.gnm1.ann1.K04ERL Arachis hypogaea HOM05D004681 ORTHO05D005541 2.2e-82 309.7 233 64.8
Glyma.13G099400 Glycine max HOM05D004681 ORTHO05D005541 1.4e-81 307.0 235 63.0
arahy.Tifrunner.gnm1.ann1.L4KBSE Arachis hypogaea HOM05D004681 ORTHO05D005541 2.5e-81 306.2 233 63.9
Lalb_Chr15g0084091 Lupinus albus HOM05D004681 ORTHO05D005541 7.9e-80 301.2 232 62.9
HanXRQChr04g0105751 Helianthus annuus HOM05D004681 ORTHO05D005541 2.3e-79 299.7 184 73.9
Glyma.15G164000 Glycine max HOM05D004681 ORTHO05D005541 3.0e-79 299.3 229 61.6
Glyma.09G057900 Glycine max HOM05D004681 ORTHO05D005541 3.9e-79 298.9 228 62.3
Glyma.17G060700 Glycine max HOM05D004681 ORTHO05D005541 1.6e-77 293.5 235 61.7
VMungo1215G0406 Vigna mungo HOM05D004681 ORTHO05D005541 2.1e-77 293.1 235 59.1
Medtr2g036910 Medicago truncatula HOM05D004681 ORTHO05D005541 2.8e-77 292.7 229 60.3
Phvul.003G142900 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 4.8e-77 292.0 235 59.6
VMungo1309G2393 Vigna mungo HOM05D004681 ORTHO05D005541 4.8e-77 292.0 229 59.4
arahy.Tifrunner.gnm1.ann1.KM341F Arachis hypogaea HOM05D004681 ORTHO05D005541 1.4e-76 290.4 230 60.0
arahy.Tifrunner.gnm1.ann1.LX7F61 Arachis hypogaea HOM05D004681 ORTHO05D005541 1.4e-76 290.4 230 60.0
Os06g0168000 Oryza sativa ssp. japonica HOM05D004681 ORTHO05D005541 1.8e-76 290.0 234 60.3
COL.COLO4_29315 Corchorus olitorius HOM05D004681 ORTHO05D005541 4.1e-76 288.9 232 60.8
Lj4g0016729 Lotus japonicus HOM05D004681 ORTHO05D005541 5.3e-76 288.5 235 59.1
Lj6g0005497 Lotus japonicus HOM05D004681 ORTHO05D005541 9.0e-76 287.7 226 61.5
Medtr4g127630 Medicago truncatula HOM05D004681 ORTHO05D005541 1.2e-75 287.3 237 61.2
Phvul.009G237800 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 1.5e-75 287.0 222 61.7
TPR.G5388 Trifolium pratense HOM05D004681 ORTHO05D005541 2.6e-75 286.2 236 59.3
Lalb_Chr12g0199511 Lupinus albus HOM05D004681 ORTHO05D005541 1.0e-74 284.3 232 60.3
Ca_02042_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 2.9e-74 282.7 228 58.8
Ca_21245_v3 Cicer arietinum L. HOM05D004410 ORTHO05D006134 1.4e-73 280.4 225 60.4
Psat0s736g0040 Pisum sativum HOM05D004681 ORTHO05D005541 1.2e-72 277.3 236 57.2
TPR.G9028 Trifolium pratense HOM05D004681 ORTHO05D005541 2.3e-71 273.1 229 58.1
HPP92_004723 Vanilla planifolia HOM05D004681 ORTHO05D005541 2.8e-69 266.2 230 56.5
Nn2g12745 Nelumbo nucifera HOM05D004681 ORTHO05D005541 6.9e-68 261.5 238 56.3
vmacro23062 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 5.9e-67 258.5 186 69.9
Psat1g145840 Pisum sativum HOM05D004681 ORTHO05D005541 6.5e-66 255.0 201 61.2
DCAR_019823 Daucus carota HOM05D004410 ORTHO05D006134 1.1e-65 254.2 239 55.6
AUR62021331 Chenopodium quinoa HOM05D004681 ORTHO05D005541 4.2e-65 252.3 233 53.2
Haze_21984 Corylus avellana HOM05D004681 ORTHO05D005541 6.9e-60 235.0 232 53.4
CDE06G1906 Ceratophyllum demersum HOM05D004681 ORTHO05D005541 2.0e-59 233.4 232 51.7
SHI02877 Sapria himalayana HOM05D004681 ORTHO05D005541 3.8e-58 229.2 239 51.9
Zm00001eb375500 Zea mays HOM05D004681 ORTHO05D005541 5.0e-58 228.8 182 60.4
Potri.018G147625 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.2e-56 224.2 234 53.0
TAR636G1425 Trochodendron aralioides HOM05D004681 ORTHO05D005541 1.2e-56 224.2 161 68.3
CAN.G609.4 Capsicum annuum HOM05D004681 ORTHO05D005541 5.7e-54 215.3 135 73.3
Mapoly0001s0301 Marchantia polymorpha HOM05D004681 ORTHO05D005541 6.3e-53 211.8 234 45.3
RcHm_v2.0_Chr7g0191431 Rosa chinensis HOM05D004681 ORTHO05D005541 2.1e-48 196.8 232 47.4
Pp3c12_12510 Physcomitrium patens HOM05D004681 ORTHO05D005541 8.0e-48 194.9 225 44.0
Pp3c4_10660 Physcomitrium patens HOM05D004681 ORTHO05D005541 3.0e-47 193.0 238 41.6
SGA_v2.0_scaffold41G15854 Striga asiatica HOM05D004681 ORTHO05D005541 6.5e-42 175.3 204 48.0
AagrBONN_evm.TU.Sc2ySwM_228.4196 Anthoceros agrestis HOM05D004681 ORTHO05D005541 2.1e-40 170.2 221 40.7
SMO358G0154 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 1.2e-38 164.5 229 41.9
Potri.001G065336 Populus trichocarpa HOM05D004681 ORTHO05D005541 2.8e-37 159.8 112 70.5
CAN.G497.61 Capsicum annuum HOM05D004681 ORTHO05D005541 7.0e-36 155.2 115 62.6
Ca_02046_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 4.7e-32 142.5 110 60.9
CAN.G266.1 Capsicum annuum HOM05D004681 ORTHO05D005541 2.2e-29 133.7 157 48.4
Potri.001G064609 Populus trichocarpa HOM05D004681 ORTHO05D005541 4.3e-25 119.4 78 69.2
Potri.018G145080 Populus trichocarpa HOM05D004681 ORTHO05D005541 2.2e-21 107.1 79 67.1
CBR_g39348 Chara braunii HOM05D000019 ORTHO05D000002 1.6e-19 100.9 185 34.6
SMO367G0296 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 5.9e-19 99.0 252 32.9
QL05p087685 Quercus lobata HOM05D004681 ORTHO05D005541 8.6e-18 95.1 207 34.3
PRCOL_00000454 Prasinoderma coloniale HOM05D004681 ORTHO05D005541 1.2e-11 74.7 253 26.9
AUR62034598 Chenopodium quinoa HOM05D022644 ORTHO05D003557 1.9e-09 67.4 52 53.8
SMO230G0066 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 7.3e-09 65.5 241 27.0
MELO3C029108.2 Cucumis melo HOM05D004681 ORTHO05D005541 4.7e-08 62.8 46 60.9
SMO367G1182 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 6.8e-07 58.9 173 30.1


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