Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.5e-223 779.2 405 100.0
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.3e-195 686.4 397 91.9
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 4.9e-158 561.6 400 73.2
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 2.4e-157 559.3 392 77.6
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 3.5e-148 528.9 455 64.4
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 2.0e-143 513.1 391 70.8
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 4.4e-143 511.9 416 66.3
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 6.4e-142 508.1 396 69.9
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 6.4e-142 508.1 385 68.6
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 3.5e-140 502.3 398 66.8
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 4.6e-140 501.9 391 67.3
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 1.3e-139 500.4 324 79.0
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 1.7e-139 500.0 335 76.1
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 5.6e-138 495.0 399 68.9
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 2.1e-137 493.0 339 73.7
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 2.1e-137 493.0 384 66.4
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.7e-137 491.9 328 74.7
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 3.1e-136 489.2 376 67.6
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 5.2e-136 488.4 388 67.8
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 6.9e-136 488.0 349 73.4
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 9.0e-136 487.6 319 74.9
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 2.6e-135 486.1 335 73.1
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.6e-135 484.6 307 77.9
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 3.5e-132 475.7 350 69.4
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 1.0e-131 474.2 332 71.4
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 1.3e-129 467.2 409 59.9
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 1.3e-129 467.2 352 66.5
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 2.1e-129 466.5 375 65.6
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 6.2e-129 464.9 398 62.3
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 6.2e-129 464.9 313 72.5
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.1e-128 464.2 398 62.3
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 4.0e-128 462.2 346 68.8
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 1.5e-127 460.3 336 68.5
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 9.9e-127 457.6 455 57.8
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 2.2e-126 456.4 396 61.4
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.2e-126 456.4 328 70.1
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.9e-126 456.1 314 72.6
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 6.4e-126 454.9 350 67.4
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 8.4e-126 454.5 344 68.3
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 8.4e-126 454.5 287 77.0
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 1.4e-125 453.8 362 65.7
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 1.9e-125 453.4 353 66.3
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.9e-125 453.4 388 61.3
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 7.1e-125 451.4 333 66.1
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 9.3e-125 451.1 379 61.2
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 3.5e-124 449.1 395 60.8
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 3.5e-124 449.1 317 70.7
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 3.5e-124 449.1 375 62.9
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 4.6e-124 448.7 382 63.6
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.0e-123 447.6 328 70.1
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.3e-123 447.2 295 74.9
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 1.8e-123 446.8 350 66.3
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 2.3e-123 446.4 326 67.8
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 2.3e-123 446.4 336 67.3
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 3.0e-123 446.0 333 71.8
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 3.9e-123 445.7 330 66.1
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 3.9e-123 445.7 396 59.1
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 6.7e-123 444.9 351 65.8
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 6.7e-123 444.9 316 72.2
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 8.7e-123 444.5 333 71.8
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 1.1e-122 444.1 383 60.8
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.5e-122 443.7 304 72.7
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 7.4e-122 441.4 324 69.1
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 1.6e-121 440.3 349 65.0
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.1e-121 439.9 293 73.4
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 8.1e-121 438.0 306 70.9
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 1.1e-120 437.6 317 71.3
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 4.0e-120 435.6 343 66.2
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.3e-120 435.3 325 68.0
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 9.0e-120 434.5 352 65.6
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.2e-119 434.1 325 68.0
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.5e-119 433.7 386 60.1
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 2.6e-119 433.0 333 69.4
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 7.6e-119 431.4 358 63.1
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 9.9e-119 431.0 410 59.5
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 2.9e-118 429.5 404 55.0
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 1.1e-117 427.6 274 77.4
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 1.1e-117 427.6 313 70.6
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 9.3e-117 424.5 326 66.0
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 3.5e-116 422.5 303 69.3
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 2.3e-115 419.9 304 67.1
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 8.7e-115 417.9 311 65.9
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 8.7e-115 417.9 306 66.3
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 1.1e-114 417.5 389 58.9
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 2.5e-114 416.4 275 73.5
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 1.0e-110 404.4 307 64.8
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 4.9e-110 402.1 322 62.4
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 3.0e-107 392.9 306 66.7
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.5e-106 390.6 244 75.8
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 1.6e-105 387.1 331 61.6
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 2.2e-105 386.7 309 62.8
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 2.2e-105 386.7 257 72.8
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 5.0e-102 375.6 293 63.1
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 3.2e-101 372.9 449 49.2
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 9.4e-101 371.3 294 65.6
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 4.6e-100 369.0 273 67.4
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 3.0e-83 313.2 433 50.6
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 1.1e-80 304.7 190 74.7
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 2.4e-80 303.5 257 63.8
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 4.5e-79 299.3 210 69.0
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 4.5e-79 299.3 313 55.3
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 7.0e-72 275.4 295 54.6
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.5e-69 267.7 265 52.8
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 9.4e-69 265.0 247 57.1
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 6.3e-65 252.3 283 44.9
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 8.0e-60 235.3 257 56.0
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.0e-59 233.4 154 77.3
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 4.0e-59 233.0 175 66.3
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 3.6e-52 209.9 141 70.2
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 2.0e-50 204.1 287 41.1
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 4.4e-50 203.0 176 57.4
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 3.7e-49 199.9 203 54.2
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 3.2e-48 196.8 280 41.4
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 4.9e-41 172.9 171 56.1
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.3e-38 164.1 179 49.7
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 5.6e-37 159.5 131 61.8
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 5.2e-35 152.9 145 52.4
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 1.6e-31 141.4 229 40.2
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 1.2e-28 131.7 78 83.3
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 2.8e-28 130.6 196 41.3
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 2.4e-24 117.5 132 48.5
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 4.2e-24 116.7 191 42.4
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.2e-23 115.2 71 71.8
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 1.3e-22 111.7 191 39.8
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 3.6e-20 103.6 198 36.4
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.4e-19 101.7 188 37.8
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 5.3e-19 99.8 304 27.6
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 9.0e-19 99.0 165 33.3
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 1.5e-18 98.2 63 79.4
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 2.6e-18 97.4 107 54.2
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 2.6e-18 97.4 83 54.2
Pp3c9_21990 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.3e-17 95.1 367 26.2
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 8.4e-17 92.4 59 76.3
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 1.1e-16 92.0 53 81.1
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 2.4e-16 90.9 53 79.2
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 7.1e-16 89.4 53 79.2
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 3.3e-13 80.5 58 67.2
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 7.3e-13 79.3 64 64.1
SMO118G0092 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 4.0e-11 73.6 340 23.2
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 6.9e-11 72.8 62 45.2
SMO263G0001 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 1.7e-09 68.2 349 22.3
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 2.9e-09 67.4 252 25.4
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 2.9e-09 67.4 312 25.3
PRCOL_00004141 Prasinoderma coloniale HOM05D036318 ORTHO05D005510 1.9e-08 64.7 231 24.7
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 5.4e-08 63.2 258 26.0
Pp3c15_24210 Physcomitrium patens HOM05D005158 ORTHO05D005510 4.6e-07 60.1 255 26.7
CBR_g49491 Chara braunii HOM05D005158 ORTHO05D005510 1.0e-06 58.9 189 24.3


User provided reference genes

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