Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001940 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 4.0e-37 157.5 77 100.0
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 6.9e-13 77.0 44 86.4
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 1.2e-12 76.3 44 86.4
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 1.5e-12 75.9 44 84.1
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 2.6e-12 75.1 44 84.1
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.4e-10 69.3 44 79.5
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 1.4e-10 69.3 51 68.6
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 9.4e-10 66.6 43 81.4
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 2.1e-09 65.5 44 72.7
Dinv25932 Davidia involucrata HOM05D000657 ORTHO05D002092 4.6e-09 64.3 44 70.5
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 3.0e-08 61.6 44 70.5
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 5.1e-08 60.8 44 65.9
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 8.8e-08 60.1 42 69.0
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 1.1e-07 59.7 45 66.7
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 2.6e-07 58.5 44 68.2
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 2.6e-07 58.5 45 64.4
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 3.3e-07 58.2 43 69.8
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 4.4e-07 57.8 49 61.2
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 4.4e-07 57.8 49 61.2
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 4.4e-07 57.8 34 82.4
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 4.4e-07 57.8 43 67.4
Nn7g36809 Nelumbo nucifera HOM05D006326 ORTHO05D007589 7.4e-07 57.0 43 67.4
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 9.7e-07 56.6 37 73.0
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 1.3e-06 56.2 44 70.5
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 1.7e-06 55.8 36 72.2
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 2.8e-06 55.1 37 70.3
VMungo0720G0679 Vigna mungo HOM05D006326 ORTHO05D007589 2.8e-06 55.1 53 54.7
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 4.8e-06 54.3 35 71.4
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 4.8e-06 54.3 44 63.6
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 8.2e-06 53.5 44 59.1
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 8.2e-06 53.5 44 65.9
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 8.2e-06 53.5 44 65.9
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 8.2e-06 53.5 38 68.4
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 8.2e-06 53.5 44 61.4
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 8.2e-06 53.5 34 76.5


User provided reference genes

Program Settings