Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 1.1e-59 233.0 113 100.0
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 4.8e-39 164.5 108 75.0
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 8.5e-36 153.7 113 69.0
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 1.0e-33 146.7 112 67.9
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 3.0e-33 145.2 112 65.2
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 3.0e-33 145.2 114 64.0
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 1.2e-32 143.3 112 64.3
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 1.2e-32 143.3 114 64.9
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 4.4e-32 141.4 112 64.3
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 5.7e-32 141.0 113 63.7
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 5.7e-32 141.0 106 68.9
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 1.7e-31 139.4 107 66.4
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 2.2e-31 139.0 116 63.8
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 2.2e-31 139.0 106 65.1
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 2.2e-31 139.0 116 67.2
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 2.2e-31 139.0 116 67.2
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 2.8e-31 138.7 116 67.2
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 2.8e-31 138.7 113 65.5
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 4.9e-31 137.9 103 68.9
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 8.3e-31 137.1 113 65.5
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 1.4e-30 136.3 113 62.8
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 1.8e-30 136.0 113 62.8
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 1.8e-30 136.0 113 62.8
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 2.4e-30 135.6 113 61.1
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 2.4e-30 135.6 115 66.1
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 3.1e-30 135.2 105 63.8
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 3.1e-30 135.2 113 60.2
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 4.1e-30 134.8 113 64.6
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 5.4e-30 134.4 113 58.4
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 7.0e-30 134.0 115 65.2
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 1.2e-29 133.3 113 61.1
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 2.0e-29 132.5 116 64.7
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 3.5e-29 131.7 112 63.4
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 3.5e-29 131.7 113 60.2
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 3.5e-29 131.7 113 64.6
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 3.5e-29 131.7 115 62.6
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 3.5e-29 131.7 107 62.6
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 4.5e-29 131.3 108 63.0
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 7.8e-29 130.6 112 62.5
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 7.8e-29 130.6 114 65.8
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 7.8e-29 130.6 106 60.4
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.0e-28 130.2 112 62.5
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 1.7e-28 129.4 113 60.2
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 2.9e-28 128.6 112 63.4
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 3.8e-28 128.3 113 58.4
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 5.0e-28 127.9 112 61.6
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 8.6e-28 127.1 113 59.3
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 1.5e-27 126.3 59 91.5
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 2.5e-27 125.6 106 58.5
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 4.3e-27 124.8 113 60.2
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 7.3e-27 124.0 103 58.3
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 2.8e-26 122.1 76 72.4
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 4.7e-26 121.3 74 71.6
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 1.0e-25 120.2 107 59.8
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 1.0e-25 120.2 107 56.1
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 1.8e-25 119.4 114 50.9
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 3.0e-25 118.6 103 55.3
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 4.0e-25 118.2 107 60.7
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 4.0e-25 118.2 103 60.2
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 6.8e-25 117.5 110 58.2
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 6.8e-25 117.5 103 57.3
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 8.9e-25 117.1 110 55.5
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 1.5e-24 116.3 73 67.1
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 2.6e-24 115.5 54 92.6
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 2.6e-24 115.5 112 57.1
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 3.4e-24 115.2 102 54.9
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 3.4e-24 115.2 86 64.0
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 5.7e-24 114.4 54 90.7
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 5.7e-24 114.4 58 79.3
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 5.7e-24 114.4 115 53.9
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 5.7e-24 114.4 110 53.6
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 2.2e-23 112.5 90 56.7
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 2.2e-23 112.5 57 86.0
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 2.9e-23 112.1 100 58.0
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 2.9e-23 112.1 116 53.4
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 3.7e-23 111.7 112 54.5
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 4.9e-23 111.3 116 52.6
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 4.9e-23 111.3 85 65.9
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 6.4e-23 110.9 83 62.7
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 8.3e-23 110.5 51 92.2
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 8.3e-23 110.5 51 92.2
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 8.3e-23 110.5 51 92.2
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 8.3e-23 110.5 51 92.2
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 8.3e-23 110.5 51 92.2
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 8.3e-23 110.5 108 55.6
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 1.1e-22 110.2 102 55.9
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 2.4e-22 109.0 73 71.2
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 3.2e-22 108.6 104 51.0
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 3.2e-22 108.6 105 50.5
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 3.2e-22 108.6 105 53.3
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 3.2e-22 108.6 107 54.2
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 5.4e-22 107.8 105 53.3
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 5.4e-22 107.8 107 53.3
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 1.2e-21 106.7 104 51.0
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 1.6e-21 106.3 105 54.3
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 3.5e-21 105.1 113 52.2
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 3.5e-21 105.1 113 52.2
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 3.5e-21 105.1 113 52.2
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 3.0e-20 102.1 114 49.1
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 3.0e-20 102.1 55 74.5
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 3.0e-20 102.1 90 58.9
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 5.0e-20 101.3 103 52.4
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 5.0e-20 101.3 47 85.1
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 8.6e-20 100.5 109 47.7
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 1.1e-19 100.1 117 45.3
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 1.9e-19 99.4 112 47.3
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 2.5e-19 99.0 105 48.6
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 4.3e-19 98.2 108 48.1
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 9.5e-19 97.1 58 69.0
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 2.1e-18 95.9 115 46.1
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 2.8e-18 95.5 113 50.4
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 8.9e-17 90.5 108 39.8
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 1.5e-16 89.7 46 78.3
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 2.0e-16 89.4 112 41.1
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 5.8e-16 87.8 49 67.3
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 1.7e-15 86.3 58 60.3


User provided reference genes

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