Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001882 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 7.5e-244 846.7 402 100.0
CSS0042462 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 3.3e-239 831.2 402 98.5
CSS0040106 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 1.5e-212 742.7 402 88.3
QL06p033966 Quercus lobata HOM05D005603 ORTHO05D006944 4.5e-212 741.1 401 88.3
Aqoxy5G01490 Aquilegia oxysepala HOM05D005603 ORTHO05D006944 2.4e-210 735.3 406 86.2
Prupe.7G165200 Prunus persica HOM05D005603 ORTHO05D006944 1.0e-208 729.9 402 87.3
Sopen02g029190 Solanum pennellii HOM05D005603 ORTHO05D006944 8.7e-208 726.9 402 86.1
COL.COLO4_21962 Corchorus olitorius HOM05D005603 ORTHO05D006944 5.6e-207 724.2 401 87.3
Glyma.01G168600 Glycine max HOM05D005603 ORTHO05D006944 7.4e-207 723.8 403 85.4
Glyma.11G074800 Glycine max HOM05D005603 ORTHO05D006944 2.8e-206 721.8 403 85.1
Nitab4.5_0008176g0030 Nicotiana tabacum HOM05D005603 ORTHO05D006944 4.8e-206 721.1 417 82.3
Phvul.002G111500 Phaseolus vulgaris HOM05D005603 ORTHO05D006944 6.2e-206 720.7 403 84.9
Ca_24898_v3 Cicer arietinum L. HOM05D005603 ORTHO05D006944 8.1e-206 720.3 403 85.1
Hma1.2p1_0743F.1_g211450 Hydrangea macrophylla HOM05D005603 ORTHO05D006944 8.1e-206 720.3 413 84.7
AUR62007651 Chenopodium quinoa HOM05D005603 ORTHO05D006944 1.1e-205 719.9 403 83.4
Sc03g0003440 Simmondsia chinensis HOM05D005603 ORTHO05D006944 1.1e-205 719.9 403 84.9
TPR.G2333 Trifolium pratense HOM05D005603 ORTHO05D006944 1.1e-205 719.9 403 84.4
CANSAT01G2298 Cannabis sativa HOM05D005603 ORTHO05D006944 1.4e-205 719.5 400 85.5
FvH4_1g12160 Fragaria vesca HOM05D005603 ORTHO05D006944 1.4e-205 719.5 402 85.1
MD15G1249000 Malus domestica HOM05D005603 ORTHO05D006944 1.8e-205 719.2 401 85.5
Nn5g29214 Nelumbo nucifera HOM05D005603 ORTHO05D006944 4.0e-205 718.0 402 85.8
SGA_v2.0_scaffold47G17673 Striga asiatica HOM05D005603 ORTHO05D006944 4.0e-205 718.0 408 83.8
Psat2g155920 Pisum sativum HOM05D005603 ORTHO05D006944 6.9e-205 717.2 403 84.4
Manes.02G101300 Manihot esculenta HOM05D005603 ORTHO05D006944 9.0e-205 716.8 399 86.0
CiPaw.07G056000 Carya illinoinensis HOM05D005603 ORTHO05D006944 1.2e-204 716.5 403 86.4
VMungo1215G2039 Vigna mungo HOM05D005603 ORTHO05D006944 1.2e-204 716.5 403 84.1
Gohir.A02G169100 Gossypium hirsutum HOM05D005603 ORTHO05D006944 2.0e-204 715.7 401 86.3
MELO3C007885.2 Cucumis melo HOM05D005603 ORTHO05D006944 2.6e-204 715.3 401 85.8
Eucgr.I02369 Eucalyptus grandis HOM05D005603 ORTHO05D006944 2.6e-204 715.3 402 84.8
HanXRQChr16g0531111 Helianthus annuus HOM05D005603 ORTHO05D006944 2.6e-204 715.3 400 84.2
Gohir.D03G010900 Gossypium hirsutum HOM05D005603 ORTHO05D006944 3.4e-204 714.9 401 86.0
Gorai.003G011300 Gossypium raimondii HOM05D005603 ORTHO05D006944 3.4e-204 714.9 401 86.0
TAR628G0819 Trochodendron aralioides HOM05D005603 ORTHO05D006944 3.4e-204 714.9 401 85.0
CsaV3_6G046890 Cucumis sativus L. HOM05D005603 ORTHO05D006944 4.5e-204 714.5 401 85.8
Medtr5g021520 Medicago truncatula HOM05D005603 ORTHO05D006944 4.5e-204 714.5 404 84.2
Thecc.01G023100 Theobroma cacao HOM05D005603 ORTHO05D006944 4.5e-204 714.5 401 86.3
arahy.Tifrunner.gnm1.ann1.V913IW Arachis hypogaea HOM05D005603 ORTHO05D006944 7.6e-204 713.8 403 84.4
MSTRG.15764 Avicennia marina HOM05D005603 ORTHO05D006944 7.6e-204 713.8 402 84.8
Hund14030 Selenicereus undatus HOM05D005603 ORTHO05D006944 1.0e-203 713.4 403 82.6
ClCG01G020120 Citrullus lanatus HOM05D005603 ORTHO05D006944 2.9e-203 711.8 401 85.5
Cc07_g10420 Coffea canephora HOM05D005603 ORTHO05D006944 8.4e-203 710.3 391 86.4
Lj2g0023828 Lotus japonicus HOM05D005603 ORTHO05D006944 1.1e-202 709.9 408 83.6
MD02G1111100 Malus domestica HOM05D005603 ORTHO05D006944 1.1e-202 709.9 401 84.5
GSVIVG01018824001 Vitis vinifera HOM05D005603 ORTHO05D006944 1.1e-202 709.9 391 87.5
RcHm_v2.0_Chr2g0099911 Rosa chinensis HOM05D005603 ORTHO05D006944 5.5e-202 707.6 402 84.8
TWI09G0997 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 1.2e-201 706.4 402 83.8
EL10As8g23850 Beta vulgaris HOM05D005603 ORTHO05D006944 2.1e-201 705.7 395 83.8
Ciclev10025760m.g Citrus clementina HOM05D005603 ORTHO05D006944 6.0e-201 704.1 406 82.3
PGSC0003DMG400003547 Solanum tuberosum HOM05D005603 ORTHO05D006944 6.0e-201 704.1 388 85.8
Sed0002868 Sechium edule HOM05D005603 ORTHO05D006944 7.9e-201 703.7 404 83.9
Peaxi162Scf00083g01233 Petunia axillaris HOM05D005603 ORTHO05D006944 1.3e-200 703.0 394 84.8
Oeu035330.1 Olea europaea HOM05D005603 ORTHO05D006944 1.8e-200 702.6 402 82.8
PSO541G2355 Papaver somniferum HOM05D005603 ORTHO05D006944 3.9e-200 701.4 401 82.8
PSO675G2068 Papaver somniferum HOM05D005603 ORTHO05D006944 3.9e-200 701.4 401 82.8
Potri.005G117200 Populus trichocarpa HOM05D005603 ORTHO05D006944 5.1e-200 701.0 399 84.7
TAR376G0194 Trochodendron aralioides HOM05D005603 ORTHO05D006944 5.1e-200 701.0 401 84.0
arahy.Tifrunner.gnm1.ann1.8YZ064 Arachis hypogaea HOM05D005603 ORTHO05D006944 6.7e-200 700.7 432 78.9
Migut.L00039 Erythranthe guttata HOM05D005603 ORTHO05D006944 6.7e-200 700.7 402 83.1
ECA246G4842 Erigeron canadensis HOM05D005603 ORTHO05D006944 1.1e-199 699.9 390 84.6
Nitab4.5_0000912g0020 Nicotiana tabacum HOM05D005603 ORTHO05D006944 1.5e-199 699.5 409 82.2
Duzib147G0771 Durio zibethinus HOM05D005603 ORTHO05D006944 2.5e-199 698.7 390 87.2
SalBow8G5567 Salvia bowleyana HOM05D005603 ORTHO05D006944 4.3e-199 698.0 413 82.6
Lsat_1_v5_gn_3_73720 Lactuca sativa HOM05D005603 ORTHO05D006944 7.4e-199 697.2 395 83.3
CDE05G2538 Ceratophyllum demersum HOM05D005603 ORTHO05D006944 9.6e-199 696.8 401 82.3
Potri.007G015800 Populus trichocarpa HOM05D005603 ORTHO05D006944 1.6e-198 696.0 401 83.3
Hund16476 Selenicereus undatus HOM05D005603 ORTHO05D006944 1.4e-197 693.0 434 77.4
THA.LOC104819186 Tarenaya hassleriana HOM05D005603 ORTHO05D006944 1.4e-197 693.0 399 82.2
ATR0620G128 Amborella trichopoda HOM05D005603 ORTHO05D006944 2.0e-196 689.1 401 81.8
DCAR_021493 Daucus carota HOM05D005603 ORTHO05D006944 5.9e-196 687.6 403 81.6
Carub.0005s1753 Capsella rubella HOM05D005603 ORTHO05D006944 1.3e-195 686.4 402 78.9
AL5G31550 Arabidopsis lyrata HOM05D005603 ORTHO05D006944 2.9e-195 685.3 402 79.1
Rhsim08G0035200 Rhododendron simsii HOM05D005603 ORTHO05D006944 3.8e-195 684.9 414 79.7
Aa31LG4G19220 Aethionema arabicum HOM05D005603 ORTHO05D006944 6.5e-195 684.1 402 80.1
AT3G51130 Arabidopsis thaliana HOM05D005603 ORTHO05D006944 1.4e-194 682.9 402 79.1
CAN.G358.2 Capsicum annuum HOM05D005603 ORTHO05D006944 1.4e-194 682.9 391 82.6
Thhalv10010418m.g Eutrema salsugineum HOM05D005603 ORTHO05D006944 1.4e-194 682.9 402 78.6
Haze_03808 Corylus avellana HOM05D005603 ORTHO05D006944 2.7e-193 678.7 402 82.6
Os06g0714000 Oryza sativa ssp. japonica HOM05D005603 ORTHO05D006944 4.6e-193 677.9 399 80.5
FAN28G0526 Fragaria x ananassa HOM05D005603 ORTHO05D006944 5.1e-192 674.5 402 81.3
Sed0017160 Sechium edule HOM05D005603 ORTHO05D006944 2.5e-191 672.2 403 80.9
BcaC06g33053 Brassica carinata HOM05D005603 ORTHO05D006944 4.3e-191 671.4 399 78.9
Sp5g11080 Schrenkiella parvula HOM05D005603 ORTHO05D006944 2.8e-190 668.7 399 78.4
CARHR160730 Cardamine hirsuta HOM05D005603 ORTHO05D006944 1.1e-189 666.8 402 77.4
HPP92_025419 Vanilla planifolia HOM05D005603 ORTHO05D006944 2.4e-189 665.6 400 79.0
FAN23G1635 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.0e-187 660.2 396 80.3
A03p48150 Brassica napus HOM05D005603 ORTHO05D006944 1.1e-186 656.8 383 79.4
BraA03t13922Z Brassica rapa HOM05D005603 ORTHO05D006944 1.1e-186 656.8 383 79.4
Cpa.g.sc6.214 Carica papaya HOM05D005603 ORTHO05D006944 7.2e-186 654.1 418 77.5
BolC7t45134H Brassica oleracea HOM05D005603 ORTHO05D006944 2.3e-184 649.0 385 78.7
MSTRG.3829 Avicennia marina HOM05D005603 ORTHO05D006944 3.9e-184 648.3 402 77.9
vmacro22086 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 3.9e-184 648.3 357 85.2
FAN19G0288 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.5e-183 645.6 386 80.6
Lj4C215G4 Lonicera japonica HOM05D005603 ORTHO05D006944 6.3e-182 641.0 401 77.6
TWI53G1238 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 1.2e-180 636.7 377 82.0
C07p46180 Brassica napus HOM05D005603 ORTHO05D006944 1.5e-180 636.3 406 74.6
unitig_32.g11821 Utricularia gibba HOM05D005603 ORTHO05D006944 3.4e-180 635.2 390 78.7
FAN26G2705 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.9e-179 632.1 379 80.7
BraA09t39879Z Brassica rapa HOM05D005603 ORTHO05D006944 1.0e-176 623.6 384 76.3
A09p44190 Brassica napus HOM05D005603 ORTHO05D006944 2.3e-176 622.5 384 76.0
BolC8t50258H Brassica oleracea HOM05D005603 ORTHO05D006944 2.6e-175 619.0 384 75.5
vmacro18394 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 5.7e-175 617.8 360 81.1
Sabra05G0096200 Salix brachista HOM05D005603 ORTHO05D006944 1.7e-174 616.3 411 75.4
BcaB01g00547 Brassica carinata HOM05D005603 ORTHO05D006944 3.7e-174 615.1 373 77.2
Zm00001eb227930 Zea mays HOM05D005603 ORTHO05D006944 1.8e-173 612.8 400 74.8
Duzib264G0505 Durio zibethinus HOM05D005603 ORTHO05D006944 6.5e-171 604.4 401 76.3
Sabra07G0013000 Salix brachista HOM05D005603 ORTHO05D006944 1.5e-167 593.2 400 73.5
C08p26410 Brassica napus HOM05D005603 ORTHO05D006944 1.8e-165 586.3 354 78.0
Lalb_Chr16g0377611 Lupinus albus HOM05D005603 ORTHO05D006944 1.0e-163 580.5 325 83.7
Ah.02g124640 Amaranthus hybridus HOM05D005603 ORTHO05D006944 2.1e-161 572.8 404 70.3
AagrBONN_evm.TU.Sc2ySwM_228.543 Anthoceros agrestis HOM05D005603 ORTHO05D006944 8.0e-161 570.9 398 69.6
Pp3c2_6370 Physcomitrium patens HOM05D005603 ORTHO05D006944 3.0e-160 568.9 396 68.2
SMO117G0153 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 1.7e-158 563.1 392 66.6
Dinv40059 Davidia involucrata HOM05D005603 ORTHO05D006944 3.7e-158 562.0 305 88.5
Dinv33602 Davidia involucrata HOM05D005603 ORTHO05D006944 8.3e-158 560.8 306 87.9
Pp3c10_8990 Physcomitrium patens HOM05D005603 ORTHO05D006944 7.0e-157 557.8 394 67.5
Actinidia31012 Actinidia chinensis HOM05D005603 ORTHO05D006944 7.2e-154 547.7 306 86.3
Mapoly0152s0028 Marchantia polymorpha HOM05D005603 ORTHO05D006944 5.2e-144 515.0 400 63.0
SEGI_22640 Sequoiadendron giganteum HOM05D005603 ORTHO05D006944 1.5e-143 513.5 348 71.0
Mapoly0094s0075 Marchantia polymorpha HOM05D005603 ORTHO05D006944 1.8e-141 506.5 389 62.5
Lalb_Chr09g0321921 Lupinus albus HOM05D005603 ORTHO05D006944 2.6e-119 433.0 242 85.5
Solyc02g075630.3 Solanum lycopersicum HOM05D005603 ORTHO05D006944 6.9e-104 381.7 208 87.0
SMO037G0002 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 1.6e-100 370.5 266 64.3
Atru.chr3.766 Acer truncatum HOM05D005603 ORTHO05D006944 5.1e-91 339.0 187 84.5
Migut.H02480 Erythranthe guttata HOM05D005603 ORTHO05D006944 1.9e-85 320.5 368 51.9
Actinidia26078 Actinidia chinensis HOM05D005603 ORTHO05D006944 1.1e-80 304.7 218 73.4
Nn015s41468 Nelumbo nucifera HOM05D005603 ORTHO05D006944 2.4e-80 303.5 171 84.2
Lalb_Chr09g0321931 Lupinus albus HOM05D005603 ORTHO05D006944 3.8e-78 296.2 161 84.5
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 2.5e-74 283.5 432 39.1
CBR_g36682 Chara braunii HOM05D005603 ORTHO05D000002 2.2e-73 280.4 223 61.4
Nn015s41469 Nelumbo nucifera HOM05D005603 ORTHO05D006944 9.7e-66 255.0 146 82.9
BcaC06g33054 Brassica carinata HOM05D005603 ORTHO05D006944 5.7e-58 229.2 142 76.1
CBR_g36680 Chara braunii HOM05D005603 ORTHO05D006944 9.7e-58 228.4 172 63.4
Atru.chr2.40 Acer truncatum HOM05D005603 ORTHO05D006944 1.3e-38 164.9 190 50.5
Actinidia31013 Actinidia chinensis HOM05D005603 ORTHO05D006944 1.6e-31 141.4 72 90.3
RcHm_v2.0_Chr7g0231521 Rosa chinensis HOM05D005603 ORTHO05D006944 5.6e-21 106.3 199 38.7
COL.COLO4_32114 Corchorus olitorius HOM05D000931 ORTHO05D002226 3.5e-07 60.5 43 69.8


User provided reference genes

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