Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001858 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D009147 3.2e-159 565.1 296 100.0
CSS0016646 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D009147 1.1e-109 400.6 314 77.1
Dinv19568 Davidia involucrata HOM05D000246 ORTHO05D009147 4.5e-68 262.3 315 54.0
Rhsim04G0003700 Rhododendron simsii HOM05D000146 ORTHO05D000178 4.6e-57 225.7 256 57.4
vmacro09761 Vaccinium macrocarpon HOM05D000246 ORTHO05D009147 6.9e-53 211.8 313 47.3
Actinidia00851 Actinidia chinensis HOM05D000246 ORTHO05D009147 2.5e-50 203.4 336 43.8
Oeu029459.1 Olea europaea HOM05D000246 ORTHO05D009147 4.1e-45 186.0 250 51.6
MSTRG.14574 Avicennia marina HOM05D000246 ORTHO05D009147 3.4e-44 183.0 243 50.2
Migut.H01647 Erythranthe guttata HOM05D000246 ORTHO05D009147 3.6e-41 172.9 245 46.5
Cfa017778 Carpinus fangiana HOM05D000246 ORTHO05D009147 1.4e-40 171.0 248 46.4
CiPaw.15G110300 Carya illinoinensis HOM05D000246 ORTHO05D009147 2.3e-40 170.2 298 41.3
PGSC0003DMG400032135 Solanum tuberosum HOM05D000246 ORTHO05D009147 4.4e-39 166.0 242 46.7
Manes.16G053100 Manihot esculenta HOM05D000246 ORTHO05D009147 3.7e-38 162.9 242 45.9
Haze_18453 Corylus avellana HOM05D007547 ORTHO05D009147 6.3e-38 162.2 281 42.7
Prupe.4G124100 Prunus persica HOM05D000246 ORTHO05D009147 1.4e-37 161.0 321 39.9
Solyc01g005910.3 Solanum lycopersicum HOM05D000246 ORTHO05D009147 1.4e-37 161.0 242 44.6
Potri.010G176100 Populus trichocarpa HOM05D000246 ORTHO05D009147 3.1e-37 159.8 310 39.7
QL04p096383 Quercus lobata HOM05D000246 ORTHO05D009147 7.0e-37 158.7 283 40.3
Cc00_g09080 Coffea canephora HOM05D000246 ORTHO05D009147 1.2e-36 157.9 249 47.0
Nitab4.5_0000775g0010 Nicotiana tabacum HOM05D000246 ORTHO05D009147 1.6e-36 157.5 242 43.8
SalBow1G6486 Salvia bowleyana HOM05D000246 ORTHO05D009147 2.0e-36 157.1 246 47.2
FvH4_3g13660 Fragaria vesca HOM05D000246 ORTHO05D009147 1.3e-35 154.5 318 41.5
FAN11G1354 Fragaria x ananassa HOM05D000246 ORTHO05D009147 1.3e-35 154.5 318 41.5
FAN16G3184 Fragaria x ananassa HOM05D000246 ORTHO05D009147 1.3e-35 154.5 317 41.6
Sopen01g001920 Solanum pennellii HOM05D000246 ORTHO05D009147 1.3e-35 154.5 242 43.0
Ciclev10005602m.g Citrus clementina HOM05D000246 ORTHO05D009147 2.2e-35 153.7 245 45.3
Medtr2g062820 Medicago truncatula HOM05D000246 ORTHO05D009147 2.2e-35 153.7 250 45.6
GSVIVG01036688001 Vitis vinifera HOM05D000246 ORTHO05D009147 2.9e-35 153.3 239 45.6
COL.COLO4_32273 Corchorus olitorius HOM05D000246 ORTHO05D009147 1.9e-34 150.6 245 44.9
MD05G1241400 Malus domestica HOM05D000246 ORTHO05D009147 2.5e-34 150.2 313 39.3
Gohir.A08G221640 Gossypium hirsutum HOM05D000246 ORTHO05D009147 3.2e-34 149.8 244 43.0
Gorai.004G255500 Gossypium raimondii HOM05D000246 ORTHO05D009147 3.2e-34 149.8 244 43.0
Peaxi162Scf00100g00211 Petunia axillaris HOM05D000246 ORTHO05D009147 4.2e-34 149.4 241 41.9
SGA_v2.0_scaffold239G43996 Striga asiatica HOM05D000246 ORTHO05D009147 4.2e-34 149.4 240 46.7
Gohir.D08G240200 Gossypium hirsutum HOM05D000246 ORTHO05D009147 7.2e-34 148.7 244 42.6
Glyma.08G160700 Glycine max HOM05D000246 ORTHO05D009147 2.1e-33 147.1 243 45.3
TPR.G3627 Trifolium pratense HOM05D000246 ORTHO05D009147 2.7e-33 146.7 244 44.7
Duzib213G0662 Durio zibethinus HOM05D000246 ORTHO05D009147 4.7e-33 146.0 242 43.4
Hund03211 Selenicereus undatus HOM05D000246 ORTHO05D009147 8.0e-33 145.2 239 44.4
Sabra10G0135600 Salix brachista HOM05D000246 ORTHO05D009147 2.3e-32 143.7 278 38.5
EL10Ac2g03603 Beta vulgaris HOM05D000246 ORTHO05D009147 3.0e-32 143.3 243 43.2
AUR62027960 Chenopodium quinoa HOM05D000246 ORTHO05D009147 4.0e-32 142.9 244 43.0
VMungo1080G0726 Vigna mungo HOM05D000246 ORTHO05D009147 6.7e-32 142.1 242 43.8
Lj3g0006435 Lotus japonicus HOM05D000246 ORTHO05D009147 1.2e-31 141.4 242 43.4
Ca_03316_v3 Cicer arietinum L. HOM05D007547 ORTHO05D009590 1.5e-31 141.0 248 41.9
Lalb_Chr25g0284061 Lupinus albus HOM05D000246 ORTHO05D009147 2.0e-31 140.6 254 41.7
Phvul.005G044100 Phaseolus vulgaris HOM05D000246 ORTHO05D009147 5.7e-31 139.0 242 43.0
Sed0004446 Sechium edule HOM05D000246 ORTHO05D009147 2.8e-30 136.7 236 41.5
Thecc.07G193000 Theobroma cacao HOM05D000246 ORTHO05D009147 2.8e-30 136.7 242 40.9
Psat1g130960 Pisum sativum HOM05D000246 ORTHO05D009147 4.8e-30 136.0 247 40.9
Sc23g0006300 Simmondsia chinensis HOM05D000246 ORTHO05D009147 4.8e-30 136.0 259 40.2
DCAR_019903 Daucus carota HOM05D000246 ORTHO05D009147 3.1e-29 133.3 293 38.2
Nitab4.5_0001059g0130 Nicotiana tabacum HOM05D000246 ORTHO05D009147 1.2e-28 131.3 242 40.1
arahy.Tifrunner.gnm1.ann1.A1BQQJ Arachis hypogaea HOM05D000246 ORTHO05D009147 2.0e-28 130.6 260 39.6
AUR62020752 Chenopodium quinoa HOM05D000246 ORTHO05D009147 2.7e-28 130.2 243 39.9
CANSAT56G0995 Cannabis sativa HOM05D000246 ORTHO05D009147 5.9e-28 129.0 241 41.5
MBI07_g10938_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D009147 5.9e-28 129.0 302 38.1
HanXRQChr11g0335881 Helianthus annuus HOM05D000246 ORTHO05D009147 1.7e-27 127.5 242 41.3
Aqoxy6G02815 Aquilegia oxysepala HOM05D000246 ORTHO05D009147 2.9e-27 126.7 243 40.3
MELO3C019603.2 Cucumis melo HOM05D000246 ORTHO05D009147 2.9e-27 126.7 294 37.4
CsaV3_6G013310 Cucumis sativus L. HOM05D000246 ORTHO05D009147 2.9e-27 126.7 241 39.8
Atru.chr1.7 Acer truncatum HOM05D000246 ORTHO05D009147 3.8e-27 126.3 244 39.8
TWI59G1123 Tripterygium wilfordii HOM05D000246 ORTHO05D009147 3.8e-27 126.3 241 41.5
arahy.Tifrunner.gnm1.ann1.W0YB5X Arachis hypogaea HOM05D000246 ORTHO05D009147 8.5e-27 125.2 264 39.0
ECA236G0457 Erigeron canadensis HOM05D002544 ORTHO05D007856 1.1e-26 124.8 234 41.0
Lsat_1_v5_gn_7_111020 Lactuca sativa HOM05D000246 ORTHO05D009147 5.5e-26 122.5 310 36.5
Hma1.2p1_3527F.1_g336570 Hydrangea macrophylla HOM05D000246 ORTHO05D009147 8.0e-25 118.6 152 52.6
Eucgr.F04484 Eucalyptus grandis HOM05D000246 ORTHO05D009147 1.0e-24 118.2 241 38.2
RcHm_v2.0_Chr5g0022891 Rosa chinensis HOM05D000246 ORTHO05D009147 1.0e-24 118.2 310 34.5
ClCG02G018880 Citrullus lanatus HOM05D000246 ORTHO05D009147 1.8e-24 117.5 290 35.5
PSO675G2776 Papaver somniferum HOM05D000246 ORTHO05D009147 4.0e-24 116.3 246 39.0
Lj5P743T17 Lonicera japonica HOM05D000246 ORTHO05D009147 5.2e-24 115.9 258 40.3
ATR0737G104 Amborella trichopoda HOM05D000246 ORTHO05D009147 1.2e-23 114.8 296 34.1
unitig_0.g970 Utricularia gibba HOM05D000246 ORTHO05D009147 1.5e-23 114.4 246 39.0
AL3G24360 Arabidopsis lyrata HOM05D000246 ORTHO05D009147 4.4e-23 112.8 241 36.1
AT3G12685 Arabidopsis thaliana HOM05D000246 ORTHO05D009147 9.8e-23 111.7 249 36.1
CARHR087200 Cardamine hirsuta HOM05D000246 ORTHO05D009147 1.7e-22 110.9 241 37.3
THA.LOC104815716 Tarenaya hassleriana HOM05D000246 ORTHO05D009147 4.8e-22 109.4 240 37.1
HPP92_020022 Vanilla planifolia HOM05D000246 ORTHO05D009147 4.8e-22 109.4 241 35.3
Carub.0003s1204 Capsella rubella HOM05D000246 ORTHO05D009147 6.3e-22 109.0 241 35.7
Cpa.g.sc118.5 Carica papaya HOM05D000246 ORTHO05D009147 1.1e-21 108.2 249 35.3
Thhalv10021510m.g Eutrema salsugineum HOM05D000246 ORTHO05D009147 4.1e-21 106.3 237 35.4
BraA01t04116Z Brassica rapa HOM05D000246 ORTHO05D009147 5.4e-21 105.9 250 36.4
BNapus_Darmor_BZH_scaffold_149p00210 Brassica napus HOM05D000246 ORTHO05D009147 2.0e-20 104.0 238 34.9
BcaB04g21046 Brassica carinata HOM05D000146 ORTHO05D009147 5.9e-20 102.4 238 34.9
BcaC09g48255 Brassica carinata HOM05D000246 ORTHO05D009147 5.9e-20 102.4 238 34.9
Nn4g26672 Nelumbo nucifera HOM05D000246 ORTHO05D009147 1.3e-19 101.3 246 37.4
BcaNung07028 Brassica carinata HOM05D000246 ORTHO05D009147 2.9e-19 100.1 240 35.0
C01p52490 Brassica napus HOM05D000246 ORTHO05D009147 2.9e-19 100.1 240 35.0
BolC1t05187H Brassica oleracea HOM05D000246 ORTHO05D009147 2.9e-19 100.1 240 35.0
Zm00001eb277880 Zea mays HOM05D000246 ORTHO05D009147 2.9e-19 100.1 239 35.1
CDE10G0049 Ceratophyllum demersum HOM05D000246 ORTHO05D009147 3.8e-19 99.8 234 35.0
FAN25G2424 Fragaria x ananassa HOM05D000246 ORTHO05D009147 8.6e-19 98.6 219 37.4
Hma1.2p1_1417F.1_g282150 Hydrangea macrophylla HOM05D000246 ORTHO05D009147 1.2e-17 94.7 105 55.2
PGR044G1535 Punica granatum HOM05D000246 ORTHO05D009147 2.1e-17 94.0 242 33.9
Aa31LG7G3500 Aethionema arabicum HOM05D000246 ORTHO05D009147 2.3e-16 90.5 241 32.4
Oeu034803.1 Olea europaea HOM05D000246 ORTHO05D009147 5.7e-15 85.9 104 51.9
TAR576G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 8.3e-14 82.0 146 41.8
Sp3g10840 Schrenkiella parvula HOM05D000246 ORTHO05D009147 3.1e-13 80.1 240 32.1
TAR627G1110 Trochodendron aralioides HOM05D000246 ORTHO05D009147 4.1e-13 79.7 102 47.1
Os06g0530300 Oryza sativa ssp. japonica HOM05D000246 ORTHO05D009147 1.6e-12 77.8 193 33.7
SMO142G0076 Selaginella moellendorffii HOM05D000246 ORTHO05D009147 4.5e-12 76.3 258 31.8
AagrBONN_evm.TU.Sc2ySwM_117.699 Anthoceros agrestis HOM05D000246 ORTHO05D009147 3.8e-11 73.2 270 28.1
Potri.008G080401 Populus trichocarpa HOM05D000246 ORTHO05D009147 3.3e-10 70.1 103 42.7
Pp3c26_3480 Physcomitrium patens HOM05D000246 ORTHO05D009147 1.2e-09 68.2 320 26.2
Mapoly0003s0007 Marchantia polymorpha HOM05D000246 ORTHO05D009147 2.1e-09 67.4 287 28.6
CBR_g37318 Chara braunii HOM05D000246 ORTHO05D009147 3.6e-09 66.6 129 35.7
Sabra01G0090000 Salix brachista HOM05D005208 ORTHO05D009147 4.7e-09 66.2 139 39.6
SMO358G0036 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 4.7e-09 66.2 234 30.8
QL04p096351 Quercus lobata HOM05D000132 ORTHO05D000058 3.0e-08 63.5 95 44.2
Pp3c4_23210 Physcomitrium patens HOM05D000246 ORTHO05D009147 5.2e-08 62.8 287 26.1
BcaB04g21456 Brassica carinata HOM05D000246 ORTHO05D009147 1.7e-06 57.8 278 25.5


User provided reference genes

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