Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001814 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 6.8e-122 440.7 220 100.0
CSS0000358 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 3.6e-115 418.3 202 99.0
CSS0024445 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 3.4e-113 411.8 200 98.5
CSS0048041 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 5.8e-113 411.0 202 97.0
CSS0021225 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 9.9e-113 410.2 202 97.0
CSS0005669 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 1.4e-98 363.2 230 79.6
vmacro17519 Vaccinium macrocarpon HOM05D011229 ORTHO05D013540 2.1e-78 296.2 168 77.4
CSS0023474 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 5.2e-53 211.8 104 99.0
CSS0037350 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 2.6e-52 209.5 104 97.1
CSS0042035 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 4.4e-52 208.8 104 98.1
CSS0020961 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 5.7e-52 208.4 104 96.2
CSS0007770 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 2.0e-49 199.9 104 92.3
CSS0033495 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 3.7e-43 179.1 102 87.3
vmacro14705 Vaccinium macrocarpon HOM05D011229 ORTHO05D013540 3.5e-41 172.6 121 67.8
Rhsim06G0168100 Rhododendron simsii HOM05D023412 ORTHO05D013042 1.7e-27 127.1 140 43.6
Rhsim06G0168300 Rhododendron simsii HOM05D023412 ORTHO05D013042 1.7e-27 127.1 140 43.6
Rhsim06G0168500 Rhododendron simsii HOM05D023412 ORTHO05D013042 1.7e-27 127.1 140 43.6
Rhsim06G0068600 Rhododendron simsii HOM05D023412 ORTHO05D013042 2.3e-24 116.7 176 38.1
Rhsim03G0113200 Rhododendron simsii HOM05D023412 ORTHO05D013042 1.5e-20 104.0 171 33.9
vmacro14522 Vaccinium macrocarpon HOM05D011229 ORTHO05D013540 5.0e-16 89.0 62 66.1
COL.COLO4_06890 Corchorus olitorius HOM05D059189 ORTHO05D013042 1.9e-15 87.0 132 34.1
COL.COLO4_35865 Corchorus olitorius HOM05D059189 ORTHO05D013042 2.5e-15 86.7 132 33.3
vmacro14229 Vaccinium macrocarpon HOM05D000201 ORTHO05D000490 5.0e-08 62.4 54 59.3


User provided reference genes

Program Settings