Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001813 Camellia sinensis var. sinensis HOM05D007500 ORTHO05D009197 1.3e-62 243.0 136 100.0
Dinv14836 Davidia involucrata HOM05D007500 ORTHO05D009197 2.4e-45 185.7 123 78.0
Haze_12411 Corylus avellana HOM05D007500 ORTHO05D009197 5.1e-43 177.9 136 68.4
Atru.chr11.2314 Acer truncatum HOM05D007500 ORTHO05D009197 9.6e-42 173.7 121 73.6
QL93p2010_0098 Quercus lobata HOM05D007500 ORTHO05D009197 1.3e-41 173.3 139 66.2
CANSAT01G0539 Cannabis sativa HOM05D007500 ORTHO05D009197 1.6e-41 172.9 138 68.1
QL03p052860 Quercus lobata HOM05D007500 ORTHO05D009197 6.2e-41 171.0 139 65.5
QL03p053117 Quercus lobata HOM05D007500 ORTHO05D009197 6.2e-41 171.0 139 65.5
CiPaw.05G110500 Carya illinoinensis HOM05D007500 ORTHO05D009197 9.0e-40 167.2 123 69.9
arahy.Tifrunner.gnm1.ann1.Z93F9T Arachis hypogaea HOM05D007500 ORTHO05D009197 1.2e-39 166.8 135 65.9
PGSC0003DMG400029106 Solanum tuberosum HOM05D007500 ORTHO05D009197 2.6e-39 165.6 114 75.4
Solyc05g015330.1 Solanum lycopersicum HOM05D007500 ORTHO05D009197 3.4e-39 165.2 121 71.9
Cfa009364 Carpinus fangiana HOM05D007500 ORTHO05D009197 4.5e-39 164.9 133 65.4
Sopen05g010600 Solanum pennellii HOM05D007500 ORTHO05D009197 5.8e-39 164.5 121 71.9
COL.COLO4_20391 Corchorus olitorius HOM05D007500 ORTHO05D009197 1.3e-38 163.3 125 69.6
Duzib268G0307 Durio zibethinus HOM05D007500 ORTHO05D009197 1.7e-38 162.9 139 66.2
Nn5g28851 Nelumbo nucifera HOM05D007500 ORTHO05D009197 2.2e-38 162.5 123 69.9
Aqoxy6G00433 Aquilegia oxysepala HOM05D007500 ORTHO05D009197 6.4e-38 161.0 118 69.5
Sp2g08040 Schrenkiella parvula HOM05D007500 ORTHO05D009197 6.4e-38 161.0 120 72.5
Nitab4.5_0001404g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 1.4e-37 159.8 117 72.6
Thecc.02G209700 Theobroma cacao HOM05D007500 ORTHO05D009197 1.4e-37 159.8 124 70.2
Cc11_g16840 Coffea canephora HOM05D007500 ORTHO05D009197 1.9e-37 159.5 120 71.7
THA.LOC104814194 Tarenaya hassleriana HOM05D007500 ORTHO05D009197 1.9e-37 159.5 118 68.6
CsaV3_6G032240 Cucumis sativus L. HOM05D007500 ORTHO05D009197 2.4e-37 159.1 123 68.3
Rhsim12G0026300 Rhododendron simsii HOM05D007500 ORTHO05D009197 2.4e-37 159.1 112 74.1
Lsat_1_v5_gn_8_131281 Lactuca sativa HOM05D007500 ORTHO05D009197 3.2e-37 158.7 123 65.9
Peaxi162Scf00128g00124 Petunia axillaris HOM05D007500 ORTHO05D009197 3.2e-37 158.7 114 72.8
Sed0012176 Sechium edule HOM05D007500 ORTHO05D009197 3.2e-37 158.7 121 66.9
Cpa.g.sc43.48 Carica papaya HOM05D007500 ORTHO05D009197 7.1e-37 157.5 136 64.0
MELO3C011458.2 Cucumis melo HOM05D007500 ORTHO05D009197 7.1e-37 157.5 121 67.8
Ciclev10033679m.g Citrus clementina HOM05D007500 ORTHO05D009197 9.3e-37 157.1 121 70.2
Gohir.D02G150000 Gossypium hirsutum HOM05D007500 ORTHO05D009197 9.3e-37 157.1 125 67.2
Gorai.005G168300 Gossypium raimondii HOM05D007500 ORTHO05D009197 9.3e-37 157.1 125 67.2
ClCG08G010070 Citrullus lanatus HOM05D007500 ORTHO05D009197 1.2e-36 156.8 121 68.6
Thhalv10003290m.g Eutrema salsugineum HOM05D007500 ORTHO05D009197 1.2e-36 156.8 120 70.0
PGR102G0196 Punica granatum HOM05D007500 ORTHO05D009197 1.2e-36 156.8 138 63.0
Gohir.A03G126600 Gossypium hirsutum HOM05D007500 ORTHO05D009197 2.1e-36 156.0 125 67.2
Potri.001G055000 Populus trichocarpa HOM05D007500 ORTHO05D009197 2.1e-36 156.0 122 63.9
Sabra01G0039500 Salix brachista HOM05D007500 ORTHO05D009197 3.5e-36 155.2 119 64.7
Nitab4.5_0000861g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 1.8e-35 152.9 117 71.8
BcaC06g31713 Brassica carinata HOM05D007500 ORTHO05D009197 3.9e-35 151.8 119 67.2
BcaC06g31714 Brassica carinata HOM05D007500 ORTHO05D009197 3.9e-35 151.8 119 67.2
AUR62024115 Chenopodium quinoa HOM05D007500 ORTHO05D009197 5.1e-35 151.4 132 61.4
PSO541G0382 Papaver somniferum HOM05D007500 ORTHO05D009197 5.1e-35 151.4 115 69.6
Actinidia30653 Actinidia chinensis HOM05D007500 ORTHO05D009197 6.7e-35 151.0 123 66.7
Aa31LG9G13320 Aethionema arabicum HOM05D007500 ORTHO05D009197 8.7e-35 150.6 115 67.8
AT5G43250 Arabidopsis thaliana HOM05D007500 ORTHO05D009197 8.7e-35 150.6 118 66.9
Manes.12G012100 Manihot esculenta HOM05D007500 ORTHO05D009197 8.7e-35 150.6 123 62.6
TWI18G0612 Tripterygium wilfordii HOM05D007500 ORTHO05D009197 8.7e-35 150.6 136 62.5
C07p25790 Brassica napus HOM05D007500 ORTHO05D009197 1.1e-34 150.2 120 67.5
Sc14g0009050 Simmondsia chinensis HOM05D007500 ORTHO05D009197 1.1e-34 150.2 136 62.5
A06p47960 Brassica napus HOM05D007500 ORTHO05D009197 1.5e-34 149.8 119 67.2
BraA06t27666Z Brassica rapa HOM05D007500 ORTHO05D009197 1.5e-34 149.8 119 67.2
MSTRG.7998 Avicennia marina HOM05D007500 ORTHO05D009197 2.5e-34 149.1 114 66.7
BcaC06g34668 Brassica carinata HOM05D007500 ORTHO05D009197 2.5e-34 149.1 119 65.5
BolC7t43101H Brassica oleracea HOM05D007500 ORTHO05D009197 2.5e-34 149.1 119 65.5
Prupe.1G226700 Prunus persica HOM05D007500 ORTHO05D009197 2.5e-34 149.1 152 55.3
DCAR_031200 Daucus carota HOM05D007500 ORTHO05D009197 3.3e-34 148.7 120 64.2
CARHR180640 Cardamine hirsuta HOM05D007500 ORTHO05D009197 4.3e-34 148.3 118 67.8
AL8G17240 Arabidopsis lyrata HOM05D007500 ORTHO05D009197 5.6e-34 147.9 115 67.8
EL10Ac6g13495 Beta vulgaris HOM05D007500 ORTHO05D009197 5.6e-34 147.9 133 57.9
Glyma.11G250000 Glycine max HOM05D007500 ORTHO05D009197 7.4e-34 147.5 135 62.2
Glyma.18G007100 Glycine max HOM05D007500 ORTHO05D009197 7.4e-34 147.5 119 67.2
TAR381G0854 Trochodendron aralioides HOM05D007500 ORTHO05D009197 7.4e-34 147.5 123 64.2
Carub.0008s0545 Capsella rubella HOM05D007500 ORTHO05D009197 2.8e-33 145.6 118 66.9
Ca_16464_v3 Cicer arietinum L. HOM05D007500 ORTHO05D009197 3.7e-33 145.2 117 64.1
FAN12G0274 Fragaria x ananassa HOM05D007500 ORTHO05D009197 3.7e-33 145.2 116 62.9
FAN17G2194 Fragaria x ananassa HOM05D007500 ORTHO05D009197 3.7e-33 145.2 116 63.8
FAN22G1415 Fragaria x ananassa HOM05D007500 ORTHO05D009197 4.8e-33 144.8 116 63.8
Migut.K00728 Erythranthe guttata HOM05D007500 ORTHO05D009197 6.2e-33 144.4 119 63.0
VMungo1383G3421 Vigna mungo HOM05D007500 ORTHO05D009197 6.2e-33 144.4 119 65.5
FvH4_4g23840 Fragaria vesca HOM05D007500 ORTHO05D009197 1.1e-32 143.7 116 62.1
FAN07G2442 Fragaria x ananassa HOM05D007500 ORTHO05D009197 2.4e-32 142.5 116 63.8
SGA_v2.0_scaffold9G04716 Striga asiatica HOM05D007500 ORTHO05D009197 2.4e-32 142.5 121 62.0
MBI01_g29007_MAGBIO Magnolia biondii HOM05D007500 ORTHO05D009197 5.3e-32 141.4 117 64.1
SalBow2G0500 Salvia bowleyana HOM05D007500 ORTHO05D009197 1.2e-31 140.2 106 67.9
Medtr3g085430 Medicago truncatula HOM05D007500 ORTHO05D009197 2.0e-31 139.4 117 62.4
Phvul.001G261300 Phaseolus vulgaris HOM05D007500 ORTHO05D009197 2.0e-31 139.4 119 63.0
AUR62005615 Chenopodium quinoa HOM05D007500 ORTHO05D009197 5.8e-31 137.9 111 64.0
HanXRQChr09g0258281 Helianthus annuus HOM05D007500 ORTHO05D009197 1.0e-30 137.1 123 60.2
RcHm_v2.0_Chr4g0430411 Rosa chinensis HOM05D007500 ORTHO05D009197 1.0e-30 137.1 106 66.0
CAN.G43.17 Capsicum annuum HOM05D007500 ORTHO05D009197 2.2e-30 136.0 105 70.5
Lalb_Chr08g0230661 Lupinus albus HOM05D007500 ORTHO05D009197 2.2e-30 136.0 114 60.5
Lj6g0001546 Lotus japonicus HOM05D007500 ORTHO05D009197 6.5e-30 134.4 118 61.0
Psat5g095440 Pisum sativum HOM05D007500 ORTHO05D009197 8.4e-30 134.0 115 62.6
PSO675G4883 Papaver somniferum HOM05D007500 ORTHO05D009197 1.1e-29 133.7 104 69.2
unitig_26.g10395 Utricularia gibba HOM05D007500 ORTHO05D009197 1.4e-29 133.3 122 60.7
ECA233G2547 Erigeron canadensis HOM05D007500 ORTHO05D009197 1.9e-29 132.9 104 66.3
Ah.03g136190 Amaranthus hybridus HOM05D007500 ORTHO05D009197 7.1e-29 131.0 118 56.8
TPR.G28279 Trifolium pratense HOM05D007500 ORTHO05D009197 2.7e-28 129.0 109 63.3
ATR1120G099 Amborella trichopoda HOM05D007500 ORTHO05D009197 1.3e-27 126.7 116 62.9
MD13G1118300 Malus domestica HOM05D007500 ORTHO05D009197 1.3e-27 126.7 121 57.9
MD16G1118400 Malus domestica HOM05D007500 ORTHO05D009197 2.3e-27 125.9 121 57.0
CDE06G2379 Ceratophyllum demersum HOM05D007500 ORTHO05D009197 7.4e-26 120.9 116 58.6
HPP92_002864 Vanilla planifolia HOM05D007500 ORTHO05D009197 3.2e-21 105.5 110 53.6
Zm00001eb122050 Zea mays HOM05D007500 ORTHO05D009197 3.3e-18 95.5 125 43.2
Os01g0183400 Oryza sativa ssp. japonica HOM05D007500 ORTHO05D009197 4.3e-18 95.1 117 43.6
CAN.G1248.23 Capsicum annuum HOM05D000764 ORTHO05D009197 2.1e-12 76.3 57 71.9
SEGI_35529 Sequoiadendron giganteum HOM05D007500 ORTHO05D009197 3.6e-12 75.5 80 45.0
Pp3c13_23370 Physcomitrium patens HOM05D020496 ORTHO05D009197 4.1e-08 62.0 85 42.4
Pp3c13_23373 Physcomitrium patens HOM05D020496 ORTHO05D009197 4.1e-08 62.0 85 42.4
SMO358G0741 Selaginella moellendorffii HOM05D020496 ORTHO05D009197 1.3e-06 57.0 81 39.5
CDE04G1622 Ceratophyllum demersum HOM05D002489 ORTHO05D002653 2.9e-06 55.8 77 39.0
HPP92_002807 Vanilla planifolia HOM05D007500 ORTHO05D009197 3.8e-06 55.5 76 46.1


User provided reference genes

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