Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001776 Camellia sinensis var. sinensis HOM05D061602 ORTHO05D043299 1.9e-68 262.3 128 100.0
CSS0008108 Camellia sinensis var. sinensis HOM05D061602 ORTHO05D043299 1.9e-68 262.3 128 100.0
Actinidia07956 Actinidia chinensis HOM05D006729 ORTHO05D008502 1.5e-15 86.7 62 74.2
Actinidia06196 Actinidia chinensis HOM05D006729 ORTHO05D008502 1.2e-14 83.6 70 65.7
vmacro08860 Vaccinium macrocarpon HOM05D006729 ORTHO05D008502 4.0e-13 78.6 55 70.9
Dinv25092 Davidia involucrata HOM05D006729 ORTHO05D008502 2.0e-09 66.2 59 59.3
TAR623G1267 Trochodendron aralioides HOM05D006729 ORTHO05D008502 5.9e-09 64.7 60 56.7
MD12G1049100 Malus domestica HOM05D006729 ORTHO05D008502 7.7e-09 64.3 89 41.6
Lalb_Chr20g0111151 Lupinus albus HOM05D006729 ORTHO05D008502 1.0e-08 63.9 59 55.9
CiPaw.10G022200 Carya illinoinensis HOM05D006729 ORTHO05D008502 1.7e-08 63.2 62 59.7
Hma1.2p1_0304F.1_g119210 Hydrangea macrophylla HOM05D006729 ORTHO05D008502 3.8e-08 62.0 61 57.4
Hma1.2p1_0127F.1_g059610 Hydrangea macrophylla HOM05D006729 ORTHO05D008502 6.5e-08 61.2 59 59.3
CiPaw.09G025400 Carya illinoinensis HOM05D006729 ORTHO05D008502 1.1e-07 60.5 62 56.5
MD14G1048000 Malus domestica HOM05D006729 ORTHO05D008502 1.5e-07 60.1 61 57.4
ECA248G1919 Erigeron canadensis HOM05D006729 ORTHO05D008502 1.9e-07 59.7 57 54.4
Prupe.7G087100 Prunus persica HOM05D006729 ORTHO05D008502 2.5e-07 59.3 61 54.1
QL07p025843 Quercus lobata HOM05D006729 ORTHO05D008502 2.5e-07 59.3 56 60.7
HanXRQChr01g0026291 Helianthus annuus HOM05D006729 ORTHO05D008502 7.2e-07 57.8 62 51.6
Eucgr.K01887 Eucalyptus grandis HOM05D006729 ORTHO05D008502 9.4e-07 57.4 64 53.1
DCAR_013470 Daucus carota HOM05D006729 ORTHO05D008502 1.2e-06 57.0 67 50.7
arahy.Tifrunner.gnm1.ann1.B8V3X4 Arachis hypogaea HOM05D006729 ORTHO05D008502 1.6e-06 56.6 60 58.3
Haze_20087 Corylus avellana HOM05D006729 ORTHO05D008502 1.6e-06 56.6 62 54.8
Oeu044686.1 Olea europaea HOM05D006729 ORTHO05D008502 2.1e-06 56.2 65 53.8
Thecc.05G181500 Theobroma cacao HOM05D006729 ORTHO05D008502 3.6e-06 55.5 62 54.8
arahy.Tifrunner.gnm1.ann1.Z8UC8R Arachis hypogaea HOM05D006729 ORTHO05D008502 4.7e-06 55.1 60 56.7
Lsat_1_v5_gn_1_56360 Lactuca sativa HOM05D006729 ORTHO05D008502 4.7e-06 55.1 47 59.6
FAN02G0869 Fragaria x ananassa HOM05D006729 ORTHO05D008502 6.1e-06 54.7 39 66.7
FAN05G4583 Fragaria x ananassa HOM05D006729 ORTHO05D008502 6.1e-06 54.7 39 66.7
FAN05G4950 Fragaria x ananassa HOM05D006729 ORTHO05D008502 6.1e-06 54.7 39 66.7
MBI05_g37660_MAGBIO Magnolia biondii HOM05D006729 ORTHO05D008502 6.1e-06 54.7 71 47.9
RcHm_v2.0_Chr3g0477721 Rosa chinensis HOM05D006729 ORTHO05D008502 6.1e-06 54.7 58 53.4
Duzib093G0804 Durio zibethinus HOM05D006729 ORTHO05D008502 8.0e-06 54.3 62 53.2
Sabra06G0152300 Salix brachista HOM05D006729 ORTHO05D008502 8.0e-06 54.3 61 47.5


User provided reference genes

Program Settings