Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001738 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 0.0e+00 1231.1 643 100.0
CSS0007498 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 0.0e+00 1145.2 645 94.6
Actinidia22167 Actinidia chinensis HOM05D007126 ORTHO05D008974 7.1e-252 874.0 587 82.5
Hma1.2p1_0440F.1_g153370 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 6.4e-221 771.2 533 79.9
GSVIVG01019542001 Vitis vinifera HOM05D007126 ORTHO05D008974 4.2e-220 768.5 581 74.5
CiPaw.11G120500 Carya illinoinensis HOM05D007126 ORTHO05D008974 1.6e-219 766.5 576 73.1
Rhsim02G0244700 Rhododendron simsii HOM05D007126 ORTHO05D008974 3.5e-219 765.4 582 73.5
Nitab4.5_0000726g0050 Nicotiana tabacum HOM05D007126 ORTHO05D008974 2.8e-216 755.7 583 72.2
Prupe.5G121000 Prunus persica HOM05D007126 ORTHO05D008974 8.1e-216 754.2 578 71.5
CANSAT21G1075 Cannabis sativa HOM05D007126 ORTHO05D008974 3.1e-215 752.3 582 71.0
HanXRQChr17g0534861 Helianthus annuus HOM05D007126 ORTHO05D008974 3.4e-214 748.8 588 71.3
MD06G1108400 Malus domestica HOM05D007126 ORTHO05D008974 7.9e-211 737.6 575 71.0
QL02p030251 Quercus lobata HOM05D007126 ORTHO05D008974 2.3e-210 736.1 609 68.5
ECA246G3461 Erigeron canadensis HOM05D007126 ORTHO05D008974 8.7e-210 734.2 581 70.4
PGSC0003DMG400004995 Solanum tuberosum HOM05D007126 ORTHO05D008974 1.1e-209 733.8 582 70.1
Manes.01G047820 Manihot esculenta HOM05D007126 ORTHO05D008974 4.3e-209 731.9 580 68.3
Atru.chr9.1971 Acer truncatum HOM05D007126 ORTHO05D008974 1.6e-208 729.9 601 66.9
Atru.chr9.1985 Acer truncatum HOM05D007126 ORTHO05D008974 1.6e-208 729.9 601 66.9
PGR031G2002 Punica granatum HOM05D007126 ORTHO05D008974 6.2e-208 728.0 588 69.2
Thecc.03G299000 Theobroma cacao HOM05D007126 ORTHO05D008974 8.2e-208 727.6 594 68.9
Gohir.A12G236900 Gossypium hirsutum HOM05D007126 ORTHO05D008974 5.3e-207 724.9 585 69.1
Gohir.D12G238100 Gossypium hirsutum HOM05D007126 ORTHO05D008974 6.9e-207 724.5 585 69.1
Gorai.008G255000 Gossypium raimondii HOM05D007126 ORTHO05D008974 1.5e-206 723.4 585 69.1
CAN.G390.5 Capsicum annuum HOM05D007126 ORTHO05D008974 4.5e-206 721.8 581 69.5
Sopen12g024410 Solanum pennellii HOM05D007126 ORTHO05D008974 2.9e-205 719.2 538 73.2
Eucgr.D01749 Eucalyptus grandis HOM05D007126 ORTHO05D008974 5.0e-205 718.4 598 67.9
Solyc12g055940.3 Solanum lycopersicum HOM05D007126 ORTHO05D008974 5.0e-205 718.4 548 71.7
Ciclev10019342m.g Citrus clementina HOM05D007126 ORTHO05D008974 1.9e-204 716.5 560 68.8
Potri.001G090800 Populus trichocarpa HOM05D007126 ORTHO05D008974 1.9e-204 716.5 592 67.9
Haze_09075 Corylus avellana HOM05D007126 ORTHO05D008974 3.2e-204 715.7 642 65.0
RcHm_v2.0_Chr7g0194681 Rosa chinensis HOM05D007126 ORTHO05D008974 6.1e-203 711.4 577 68.8
Duzib205G0473 Durio zibethinus HOM05D007126 ORTHO05D008974 3.0e-202 709.1 590 67.5
Migut.A00631 Erythranthe guttata HOM05D007126 ORTHO05D008974 6.7e-202 708.0 555 69.7
Lj4g0010714 Lotus japonicus HOM05D007126 ORTHO05D008974 3.3e-201 705.7 581 67.0
Sc22g0004970 Simmondsia chinensis HOM05D007126 ORTHO05D008974 2.8e-200 702.6 588 65.5
Hund11386 Selenicereus undatus HOM05D007126 ORTHO05D008974 4.8e-200 701.8 586 65.7
TWI15G1063 Tripterygium wilfordii HOM05D007126 ORTHO05D008974 6.3e-200 701.4 559 68.5
VMungo0251G2926 Vigna mungo HOM05D007126 ORTHO05D008974 3.1e-199 699.1 584 66.4
Glyma.08G023000 Glycine max HOM05D007126 ORTHO05D008974 6.9e-199 698.0 579 66.3
Potri.003G140800 Populus trichocarpa HOM05D007126 ORTHO05D008974 2.0e-198 696.4 591 66.7
Medtr8g099525 Medicago truncatula HOM05D007126 ORTHO05D008974 2.6e-198 696.0 579 66.3
Oeu009966.1 Olea europaea HOM05D007126 ORTHO05D008974 2.9e-197 692.6 566 69.8
Cc08_g16150 Coffea canephora HOM05D007126 ORTHO05D008974 6.5e-197 691.4 514 72.4
Nitab4.5_0004010g0090 Nicotiana tabacum HOM05D007126 ORTHO05D008974 1.8e-194 683.3 547 69.7
Hma1.2p1_0440F.1_g153360 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 1.1e-193 680.6 660 62.7
Sed0013130 Sechium edule HOM05D007126 ORTHO05D008974 7.4e-193 677.9 576 66.3
Aqoxy5G04057_Aqoxy5G04058 Aquilegia oxysepala HOM05D007126 ORTHO05D008974 9.7e-193 677.6 501 71.7
AUR62010848 Chenopodium quinoa HOM05D007126 ORTHO05D008974 9.7e-193 677.6 491 71.1
Lsat_1_v5_gn_3_10920 Lactuca sativa HOM05D007126 ORTHO05D008974 6.3e-192 674.9 580 66.2
CARHR046500 Cardamine hirsuta HOM05D007126 ORTHO05D008974 1.5e-190 670.2 545 65.0
PSO063G3961 Papaver somniferum HOM05D007126 ORTHO05D008974 4.5e-190 668.7 568 65.5
BcaB07g31464 Brassica carinata HOM05D007126 ORTHO05D008974 5.9e-190 668.3 496 69.8
A09p14710 Brassica napus HOM05D007126 ORTHO05D008974 2.2e-189 666.4 495 69.5
MBI06_g08479_MAGBIO Magnolia biondii HOM05D007126 ORTHO05D008974 3.8e-189 665.6 609 63.4
CsaV3_4G006650 Cucumis sativus L. HOM05D007126 ORTHO05D008974 8.5e-189 664.5 578 64.7
Lj2C166T10 Lonicera japonica HOM05D007126 ORTHO05D008974 1.4e-188 663.7 623 64.0
BolC9t54678H Brassica oleracea HOM05D007126 ORTHO05D008974 2.5e-188 662.9 495 69.7
BraA09t37117Z Brassica rapa HOM05D007126 ORTHO05D008974 2.5e-188 662.9 495 68.9
Sp2g00310 Schrenkiella parvula HOM05D007126 ORTHO05D008974 3.2e-188 662.5 495 69.7
TPR.G3456 Trifolium pratense HOM05D007126 ORTHO05D008974 9.4e-188 661.0 577 64.6
BcaC04g22569 Brassica carinata HOM05D007126 ORTHO05D008974 1.6e-187 660.2 495 69.1
AL2G10420 Arabidopsis lyrata HOM05D007126 ORTHO05D008974 2.7e-187 659.4 564 63.3
AUR62019847 Chenopodium quinoa HOM05D007126 ORTHO05D008974 3.6e-187 659.1 595 61.5
AT1G64430 Arabidopsis thaliana HOM05D007126 ORTHO05D008974 1.4e-186 657.1 531 64.2
FvH4_5g04720 Fragaria vesca HOM05D007126 ORTHO05D008974 1.8e-186 656.8 539 68.3
Lalb_Chr09g0332411 Lupinus albus HOM05D007126 ORTHO05D008974 3.9e-186 655.6 593 63.1
Aa31LG2G1430 Aethionema arabicum HOM05D007126 ORTHO05D008974 3.3e-185 652.5 495 68.9
Thhalv10023389m.g Eutrema salsugineum HOM05D007126 ORTHO05D008974 8.2e-184 647.9 574 62.5
Sabra01G0067000 Salix brachista HOM05D007126 ORTHO05D008974 2.4e-183 646.4 445 76.4
THA.LOC104817626 Tarenaya hassleriana HOM05D007126 ORTHO05D008974 2.0e-182 643.3 511 66.5
arahy.Tifrunner.gnm1.ann1.U3A0V6 Arachis hypogaea HOM05D007126 ORTHO05D008974 3.2e-180 636.0 587 62.0
Nn1g08439 Nelumbo nucifera HOM05D007126 ORTHO05D008974 1.6e-179 633.6 590 62.2
DCAR_029908 Daucus carota HOM05D007126 ORTHO05D008974 3.6e-179 632.5 515 68.0
ClCG07G011560 Citrullus lanatus HOM05D007126 ORTHO05D008974 3.0e-178 629.4 576 62.2
EL10Ac5g12922 Beta vulgaris HOM05D007126 ORTHO05D008974 5.0e-173 612.1 606 58.7
Peaxi162Scf00117g01130 Petunia axillaris HOM05D007126 ORTHO05D008974 6.5e-173 611.7 551 65.0
ATR0598G096 Amborella trichopoda HOM05D007126 ORTHO05D008974 1.1e-172 610.9 590 58.8
C09p17800 Brassica napus HOM05D007126 ORTHO05D008974 1.5e-172 610.5 471 68.2
arahy.Tifrunner.gnm1.ann1.GEY0M8 Arachis hypogaea HOM05D007126 ORTHO05D008974 1.0e-170 604.4 607 58.2
vmacro11349 Vaccinium macrocarpon HOM05D007126 ORTHO05D008974 1.4e-170 604.0 585 62.2
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 1.5e-169 600.5 567 62.6
unitig_37.g12131 Utricularia gibba HOM05D007126 ORTHO05D008974 5.0e-165 585.5 520 61.9
HPP92_007857 Vanilla planifolia HOM05D007126 ORTHO05D008974 6.1e-163 578.6 501 61.9
Psat7g210120 Pisum sativum HOM05D007126 ORTHO05D008974 8.3e-160 568.2 487 64.3
MELO3C016299.2 Cucumis melo HOM05D007126 ORTHO05D008974 7.7e-158 561.6 542 60.7
SalBow1G1535 Salvia bowleyana HOM05D007126 ORTHO05D008974 1.7e-157 560.5 553 60.9
Cpa.g.sc79.28 Carica papaya HOM05D007126 ORTHO05D008974 1.5e-156 557.4 487 63.0
SGA_v2.0_scaffold305G47987 Striga asiatica HOM05D007126 ORTHO05D008974 1.8e-151 540.4 595 56.0
Zm00001eb028190 Zea mays HOM05D007126 ORTHO05D008974 2.6e-145 520.0 501 57.1
Mapoly0029s0043 Marchantia polymorpha HOM05D007126 ORTHO05D008974 1.9e-143 513.8 500 54.8
TAR374G0215 Trochodendron aralioides HOM05D007126 ORTHO05D008974 8.6e-141 505.0 323 80.8
Phvul.002G298304 Phaseolus vulgaris HOM05D007126 ORTHO05D008974 5.1e-133 479.2 317 76.3
Pp3c15_17220 Physcomitrium patens HOM05D007126 ORTHO05D008974 3.6e-131 473.0 489 50.5
SMO367G1126 Selaginella moellendorffii HOM05D007126 ORTHO05D008974 9.2e-127 458.4 520 49.2
CDE08G1056 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 2.1e-118 430.6 418 59.1
CBR_g19104 Chara braunii HOM05D007126 ORTHO05D008974 8.1e-99 365.5 503 44.7
Carub.0002s0034 Capsella rubella HOM05D007126 ORTHO05D008974 3.1e-82 310.5 230 72.2
Dinv37525 Davidia involucrata HOM05D007126 ORTHO05D008974 2.1e-62 244.6 279 56.3
Cre14.g611950 Chlamydomonas reinhardtii HOM05D007126 ORTHO05D008974 3.3e-60 237.3 533 33.6
SEGI_23531 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 2.0e-57 228.0 199 57.3
FAN18G3621 Fragaria x ananassa HOM05D007126 ORTHO05D008974 5.9e-57 226.5 262 55.0
Carub.0002s0035 Capsella rubella HOM05D007126 ORTHO05D008974 6.1e-54 216.5 236 53.0
FAN08G3578 Fragaria x ananassa HOM05D007126 ORTHO05D008974 1.4e-53 215.3 283 52.7
SEGI_08908 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 4.4e-52 210.3 254 48.8
Os08g0332700 Oryza sativa ssp. japonica HOM05D007126 ORTHO05D008974 2.4e-50 204.5 195 56.9
CDE08G0877 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 2.0e-49 201.4 149 74.5
Cfa021999 Carpinus fangiana HOM05D007126 ORTHO05D008974 1.2e-41 175.6 172 59.9
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 1.0e-37 162.5 244 48.0
SEGI_34352 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 1.6e-30 138.7 111 69.4
Cpa.g.sc79.27 Carica papaya HOM05D007126 ORTHO05D008974 2.8e-22 111.3 71 88.7
FAN13G2101 Fragaria x ananassa HOM05D007126 ORTHO05D008974 5.1e-16 90.5 64 78.1
BcaC09g50327 Brassica carinata HOM05D017681 ORTHO05D019883 7.8e-09 66.6 117 34.2
BcaC04g20679 Brassica carinata HOM05D017681 ORTHO05D019883 1.7e-08 65.5 117 33.3


User provided reference genes

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