Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001728 Camellia sinensis var. sinensis HOM05D020138 ORTHO05D022119 6.1e-15 83.6 63 100.0
CSS0039779 Camellia sinensis var. sinensis HOM05D020138 ORTHO05D022119 1.3e-14 82.4 63 98.4
CSS0037768 Camellia sinensis var. sinensis HOM05D020138 ORTHO05D022119 3.9e-14 80.9 63 96.8
CSS0011050 Camellia sinensis var. sinensis HOM05D020138 ORTHO05D022119 1.1e-13 79.3 63 96.8
CSS0046176 Camellia sinensis var. sinensis HOM05D020138 ORTHO05D022119 4.1e-11 70.9 42 90.5
CSS0019306 Camellia sinensis var. sinensis HOM05D020138 ORTHO05D022119 1.0e-09 66.2 63 88.9
Lsat_1_v5_gn_6_60280 Lactuca sativa HOM05D005458 ORTHO05D005672 2.1e-07 58.5 42 83.3
Actinidia39967 Actinidia chinensis HOM05D005458 ORTHO05D005672 7.9e-07 56.6 42 76.2
GSVIVG01021052001 Vitis vinifera HOM05D005458 ORTHO05D005672 1.8e-06 55.5 44 77.3
Cc03_g07880 Coffea canephora HOM05D005458 ORTHO05D005672 2.3e-06 55.1 42 73.8
Nn1g07886 Nelumbo nucifera HOM05D005458 ORTHO05D005672 2.3e-06 55.1 61 57.4
Glyma.08G351700 Glycine max HOM05D005458 ORTHO05D005672 3.9e-06 54.3 55 56.4
Migut.N00389 Erythranthe guttata HOM05D005458 ORTHO05D005672 6.7e-06 53.5 42 71.4
Rhsim02G0057300 Rhododendron simsii HOM05D005458 ORTHO05D005672 8.8e-06 53.1 32 87.5


User provided reference genes

Program Settings