Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001722 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 3.5e-143 511.5 248 100.0
CSS0020755 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 4.7e-95 351.7 248 76.2
vmacro12019 Vaccinium macrocarpon HOM05D004406 ORTHO05D005660 8.9e-86 320.9 248 68.5
vmacro15158 Vaccinium macrocarpon HOM05D004406 ORTHO05D005660 8.9e-86 320.9 248 68.5
Dinv13306 Davidia involucrata HOM05D004406 ORTHO05D005660 4.9e-84 315.1 248 69.0
Dinv26661 Davidia involucrata HOM05D004406 ORTHO05D005660 4.9e-84 315.1 248 68.1
Lj1C808G13 Lonicera japonica HOM05D004406 ORTHO05D005660 9.5e-80 300.8 248 66.1
Rhsim06G0184400 Rhododendron simsii HOM05D004406 ORTHO05D005660 3.6e-79 298.9 244 66.8
TWI38G2065 Tripterygium wilfordii HOM05D004406 ORTHO05D005660 6.8e-78 294.7 248 62.5
arahy.Tifrunner.gnm1.ann1.L0EV17 Arachis hypogaea HOM05D004406 ORTHO05D005660 1.2e-77 293.9 248 64.1
Manes.10G061001 Manihot esculenta HOM05D004406 ORTHO05D005660 2.6e-77 292.7 248 63.7
Rhsim08G0107400 Rhododendron simsii HOM05D004406 ORTHO05D005660 4.4e-77 292.0 215 71.6
Sed0020103 Sechium edule HOM05D004406 ORTHO05D005660 7.5e-77 291.2 248 62.9
TAR628G1650 Trochodendron aralioides HOM05D004406 ORTHO05D005660 1.3e-76 290.4 271 58.3
Oeu002771.1 Olea europaea HOM05D004406 ORTHO05D005660 1.7e-76 290.0 250 62.8
TAR376G0792 Trochodendron aralioides HOM05D004406 ORTHO05D005660 4.9e-76 288.5 248 62.1
CiPaw.01G106500 Carya illinoinensis HOM05D004406 ORTHO05D005660 8.3e-76 287.7 248 62.1
Thecc.01G135800 Theobroma cacao HOM05D004406 ORTHO05D005660 8.3e-76 287.7 248 63.3
VMungo1080G1685 Vigna mungo HOM05D004406 ORTHO05D005660 8.3e-76 287.7 248 62.5
GSVIVG01009332001 Vitis vinifera HOM05D004406 ORTHO05D005660 8.3e-76 287.7 248 61.3
Cfa019935 Carpinus fangiana HOM05D004406 ORTHO05D005660 1.9e-75 286.6 248 62.1
Lj3g0010925 Lotus japonicus HOM05D004406 ORTHO05D005660 3.2e-75 285.8 248 60.5
Actinidia18837 Actinidia chinensis HOM05D004406 ORTHO05D005660 7.0e-75 284.6 248 64.9
Oeu044427.1 Olea europaea HOM05D004406 ORTHO05D005660 7.0e-75 284.6 250 62.0
TPR.G9754 Trifolium pratense HOM05D004406 ORTHO05D005660 9.2e-75 284.3 248 60.9
Gohir.D11G203200 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.2e-74 283.9 248 61.7
Aqoxy113s002 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 1.6e-74 283.5 248 60.5
Aqoxy6G02573 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 1.6e-74 283.5 248 60.5
Ca_03669_v3 Cicer arietinum L. HOM05D004406 ORTHO05D005660 1.6e-74 283.5 248 61.7
Glyma.15G256700 Glycine max HOM05D004406 ORTHO05D005660 1.6e-74 283.5 248 60.1
Gorai.007G217900 Gossypium raimondii HOM05D004406 ORTHO05D005660 1.6e-74 283.5 248 62.1
Phvul.005G057900 Phaseolus vulgaris HOM05D004406 ORTHO05D005660 2.1e-74 283.1 248 60.5
ClCG03G009170 Citrullus lanatus HOM05D004406 ORTHO05D005660 2.7e-74 282.7 248 60.9
Cc05_g10180 Coffea canephora HOM05D004406 ORTHO05D005660 2.7e-74 282.7 248 60.9
QL04p076605 Quercus lobata HOM05D004406 ORTHO05D005660 3.5e-74 282.3 205 71.2
MSTRG.6706 Avicennia marina HOM05D004406 ORTHO05D005660 6.0e-74 281.6 248 60.9
Potri.001G394300 Populus trichocarpa HOM05D004406 ORTHO05D005660 1.0e-73 280.8 248 62.9
Lalb_Chr25g0284911 Lupinus albus HOM05D004406 ORTHO05D005660 1.7e-73 280.0 248 61.7
Gohir.A11G220400 Gossypium hirsutum HOM05D004406 ORTHO05D005660 2.3e-73 279.6 248 61.7
FAN25G0744 Fragaria x ananassa HOM05D004406 ORTHO05D005660 3.0e-73 279.3 248 60.1
Nn5g30617 Nelumbo nucifera HOM05D004406 ORTHO05D005660 3.9e-73 278.9 248 60.1
Ciclev10001005m.g Citrus clementina HOM05D004406 ORTHO05D005660 5.1e-73 278.5 248 59.7
COL.COLO4_35795 Corchorus olitorius HOM05D004406 ORTHO05D005660 6.6e-73 278.1 248 60.9
FAN21G0297 Fragaria x ananassa HOM05D004406 ORTHO05D005660 6.6e-73 278.1 248 59.7
FAN21G3885 Fragaria x ananassa HOM05D004406 ORTHO05D005660 6.6e-73 278.1 248 59.7
MD05G1209100 Malus domestica HOM05D004406 ORTHO05D005660 6.6e-73 278.1 248 60.5
Medtr2g069330 Medicago truncatula HOM05D004406 ORTHO05D005660 6.6e-73 278.1 248 59.7
Prupe.4G148400 Prunus persica HOM05D004406 ORTHO05D005660 8.6e-73 277.7 248 60.1
Eucgr.F01412 Eucalyptus grandis HOM05D004406 ORTHO05D005660 1.1e-72 277.3 248 59.7
CsaV3_5G023450 Cucumis sativus L. HOM05D004406 ORTHO05D005660 2.5e-72 276.2 248 60.1
Cpa.g.sc132.61 Carica papaya HOM05D004406 ORTHO05D005660 3.3e-72 275.8 248 60.9
FvH4_3g16570 Fragaria vesca HOM05D004406 ORTHO05D005660 4.3e-72 275.4 248 59.3
MELO3C022781.2 Cucumis melo HOM05D004406 ORTHO05D005660 7.3e-72 274.6 248 59.7
RcHm_v2.0_Chr5g0027601 Rosa chinensis HOM05D004406 ORTHO05D005660 7.3e-72 274.6 248 60.1
Atru.chr9.1518 Acer truncatum HOM05D004406 ORTHO05D005660 9.5e-72 274.2 248 59.7
FAN11G0596 Fragaria x ananassa HOM05D004406 ORTHO05D005660 9.5e-72 274.2 248 58.9
arahy.Tifrunner.gnm1.ann1.BTSV3Q Arachis hypogaea HOM05D004406 ORTHO05D005660 1.2e-71 273.9 240 63.3
MD10G1195500 Malus domestica HOM05D004406 ORTHO05D005660 1.2e-71 273.9 248 59.3
HanXRQChr11g0329941 Helianthus annuus HOM05D004406 ORTHO05D005660 2.1e-71 273.1 248 59.3
Sc03g0007790 Simmondsia chinensis HOM05D004406 ORTHO05D005660 2.8e-71 272.7 248 60.9
ECA236G4460 Erigeron canadensis HOM05D004406 ORTHO05D005660 4.7e-71 271.9 248 60.5
Migut.M00660 Erythranthe guttata HOM05D004406 ORTHO05D005660 6.2e-71 271.6 248 58.9
Psat1g012120 Pisum sativum HOM05D004406 ORTHO05D005660 6.2e-71 271.6 248 58.9
CDE06G1959 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 2.3e-70 269.6 263 55.5
Hund02309 Selenicereus undatus HOM05D004406 ORTHO05D005660 1.2e-69 267.3 248 60.1
PSO170G0587 Papaver somniferum HOM05D004406 ORTHO05D005660 7.5e-69 264.6 248 57.3
PSO528G0243 Papaver somniferum HOM05D004406 ORTHO05D005660 7.5e-69 264.6 248 56.0
Glyma.08G170200 Glycine max HOM05D004406 ORTHO05D005660 1.7e-68 263.5 248 58.1
Gohir.A09G004700 Gossypium hirsutum HOM05D004406 ORTHO05D005660 3.7e-68 262.3 245 58.0
Peaxi162Scf00003g04835 Petunia axillaris HOM05D004406 ORTHO05D005660 4.9e-68 261.9 248 59.3
Aqoxy6G03019 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 1.4e-67 260.4 248 57.3
unitig_62.g23080 Utricularia gibba HOM05D004406 ORTHO05D005660 1.4e-67 260.4 249 56.6
PGR004G1399 Punica granatum HOM05D004406 ORTHO05D005660 1.9e-67 260.0 205 66.3
CANSAT25G0941 Cannabis sativa HOM05D004406 ORTHO05D005660 2.4e-67 259.6 249 57.8
ATR0739G109 Amborella trichopoda HOM05D004406 ORTHO05D005660 4.1e-67 258.8 248 56.0
EL10Ac9g22869 Beta vulgaris HOM05D004406 ORTHO05D005660 7.1e-67 258.1 248 56.9
Gohir.A11G222401 Gossypium hirsutum HOM05D004406 ORTHO05D005660 9.2e-67 257.7 205 63.9
Nitab4.5_0006279g0030 Nicotiana tabacum HOM05D004406 ORTHO05D005660 7.8e-66 254.6 252 57.9
Solyc10g078480.2 Solanum lycopersicum HOM05D004406 ORTHO05D005660 1.0e-65 254.2 248 58.1
PGSC0003DMG400008359 Solanum tuberosum HOM05D004406 ORTHO05D005660 2.3e-65 253.1 248 58.1
SalBow5G0012 Salvia bowleyana HOM05D004406 ORTHO05D005660 3.0e-65 252.7 203 65.0
Lsat_1_v5_gn_7_99701 Lactuca sativa HOM05D004406 ORTHO05D005660 3.9e-65 252.3 239 60.3
Sopen10g029140 Solanum pennellii HOM05D004406 ORTHO05D005660 3.9e-65 252.3 248 58.1
CAN.G960.55 Capsicum annuum HOM05D004406 ORTHO05D005660 6.6e-65 251.5 248 58.9
HPP92_025666 Vanilla planifolia HOM05D004406 ORTHO05D005660 1.1e-64 250.8 248 54.0
AUR62017618 Chenopodium quinoa HOM05D004406 ORTHO05D005660 2.5e-64 249.6 202 65.3
Zm00001eb401770 Zea mays HOM05D004406 ORTHO05D005660 7.3e-64 248.1 248 54.4
Os03g0180700 Oryza sativa ssp. japonica HOM05D004406 ORTHO05D005660 3.6e-63 245.7 250 54.8
Thhalv10007520m.g Eutrema salsugineum HOM05D004406 ORTHO05D005660 1.2e-61 240.7 248 55.2
Aa31LG7G1110 Aethionema arabicum HOM05D004406 ORTHO05D005660 2.0e-61 240.0 248 55.2
BolC8t51983H Brassica oleracea HOM05D004406 ORTHO05D005660 2.0e-61 240.0 248 55.2
FAN16G0888 Fragaria x ananassa HOM05D004406 ORTHO05D005660 2.0e-61 240.0 259 53.7
CARHR017050 Cardamine hirsuta HOM05D004406 ORTHO05D005660 3.4e-61 239.2 251 54.6
A09p60830 Brassica napus HOM05D004406 ORTHO05D005660 4.4e-61 238.8 248 54.8
BraA09t41456Z Brassica rapa HOM05D004406 ORTHO05D005660 4.4e-61 238.8 248 54.8
SGA_v2.0_scaffold73G24357 Striga asiatica HOM05D004406 ORTHO05D005660 4.4e-61 238.8 202 62.4
SalBow5G1666 Salvia bowleyana HOM05D004406 ORTHO05D005660 5.8e-61 238.4 190 66.3
BcaC05g25520 Brassica carinata HOM05D004406 ORTHO05D005660 7.6e-61 238.0 248 54.8
C05p14870 Brassica napus HOM05D004406 ORTHO05D005660 1.3e-60 237.3 248 54.8
Gohir.D11G203050 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.3e-60 237.3 177 70.1
BolC5t30202H Brassica oleracea HOM05D004406 ORTHO05D005660 1.7e-60 236.9 248 54.8
AL1G28740 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 2.2e-60 236.5 248 54.0
SEGI_06613 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 2.2e-60 236.5 198 63.6
Sp1g14730 Schrenkiella parvula HOM05D004406 ORTHO05D005660 2.9e-60 236.1 248 54.8
C08p44420 Brassica napus HOM05D004406 ORTHO05D005660 3.8e-60 235.7 248 54.4
AT1G16570 Arabidopsis thaliana HOM05D004406 ORTHO05D005660 1.4e-59 233.8 247 53.8
THA.LOC104808122 Tarenaya hassleriana HOM05D004406 ORTHO05D005660 2.4e-59 233.0 249 53.8
Carub.0001s1633 Capsella rubella HOM05D004406 ORTHO05D005660 4.2e-59 232.3 248 54.4
A06p12560 Brassica napus HOM05D004406 ORTHO05D005660 7.1e-59 231.5 248 54.0
BraA06t24419Z Brassica rapa HOM05D004406 ORTHO05D005660 7.1e-59 231.5 248 54.0
Gorai.007G217600 Gossypium raimondii HOM05D004406 ORTHO05D005660 9.2e-59 231.1 177 68.9
Duzib187G2008 Durio zibethinus HOM05D004406 ORTHO05D005660 1.2e-58 230.7 176 70.5
Haze_15516 Corylus avellana HOM05D004406 ORTHO05D005660 3.3e-56 222.6 248 52.8
Pp3c22_7820 Physcomitrium patens HOM05D004406 ORTHO05D005660 1.3e-52 210.7 285 44.9
Nitab4.5_0000812g0150 Nicotiana tabacum HOM05D004406 ORTHO05D005660 2.9e-52 209.5 253 50.2
FAN04G0447 Fragaria x ananassa HOM05D004406 ORTHO05D005660 3.2e-51 206.1 132 76.5
DCAR_013800 Daucus carota HOM05D004406 ORTHO05D005660 2.1e-50 203.4 248 48.8
SEGI_11739 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 6.6e-49 198.4 173 60.7
CDE04G2964 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 7.3e-48 194.9 248 45.2
AL6G51100 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 1.3e-47 194.1 255 46.3
Mapoly0116s0013 Marchantia polymorpha HOM05D004406 ORTHO05D005660 2.0e-45 186.8 192 56.8
SMO353G0172 Selaginella moellendorffii HOM05D004406 ORTHO05D005660 1.1e-43 181.0 248 45.6
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 1.8e-41 173.7 152 59.2
CBR_g37525 Chara braunii HOM05D004406 ORTHO05D005660 8.7e-41 171.4 190 51.1
Zm00001eb023770 Zea mays HOM05D003078 ORTHO05D003545 4.3e-40 169.1 130 60.8
Zm00001eb421280 Zea mays HOM05D004406 ORTHO05D005660 5.6e-40 168.7 130 62.3
Gorai.006G005600 Gossypium raimondii HOM05D004406 ORTHO05D005660 9.6e-40 167.9 143 65.0
Zm00001eb180660 Zea mays HOM05D004406 ORTHO05D000467 2.4e-38 163.3 130 60.0
MCO08G055 Micromonas commoda HOM05D004406 ORTHO05D005660 4.6e-34 149.1 144 53.5
Cre12.g516550 Chlamydomonas reinhardtii HOM05D004406 ORTHO05D005660 1.0e-33 147.9 160 48.8
PSO017G0585 Papaver somniferum HOM05D004406 ORTHO05D005660 2.5e-32 143.3 149 50.3
Zm00001eb307610 Zea mays HOM05D004406 ORTHO05D005660 6.2e-31 138.7 104 65.4
Actinidia18838 Actinidia chinensis HOM05D004406 ORTHO05D005660 1.0e-28 131.3 176 46.6
Haze_26719 Corylus avellana HOM05D004406 ORTHO05D005660 1.9e-27 127.1 139 50.4
SHI18055 Sapria himalayana HOM05D004406 ORTHO05D005660 1.6e-26 124.0 155 49.0
Cfa025278 Carpinus fangiana HOM05D004406 ORTHO05D005660 3.0e-25 119.8 141 49.6
PRCOL_00002569 Prasinoderma coloniale HOM05D004406 ORTHO05D005660 4.1e-22 109.4 158 40.5
Actinidia18840 Actinidia chinensis HOM05D004406 ORTHO05D005660 5.7e-16 89.0 68 69.1
Hma1.2p1_0035F.1_g022190 Hydrangea macrophylla HOM05D004406 ORTHO05D005660 7.4e-16 88.6 58 75.9
Actinidia35181 Actinidia chinensis HOM05D004406 ORTHO05D005660 3.7e-15 86.3 88 53.4
Actinidia18841 Actinidia chinensis HOM05D004406 ORTHO05D005660 1.4e-14 84.3 53 81.1
Haze_08535 Corylus avellana HOM05D004406 ORTHO05D005660 3.4e-13 79.7 95 48.4
Os06g0564800 Oryza sativa ssp. japonica HOM05D004406 ORTHO05D005660 5.9e-13 79.0 80 53.8
Sabra16G0258600 Salix brachista HOM05D004406 ORTHO05D005660 1.7e-12 77.4 72 54.2
Zm00001eb005970 Zea mays HOM05D004406 ORTHO05D005660 3.9e-09 66.2 89 39.3


User provided reference genes

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