Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 2.0e-92 342.4 172 100.0
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 4.3e-79 298.1 172 89.0
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 5.6e-79 297.7 172 89.5
CSS0019356 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 9.6e-47 190.7 107 88.8
CSS0046849 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 6.0e-33 144.8 92 80.4
CSS0012798 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 5.1e-32 141.7 92 78.3
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 1.6e-17 93.6 139 42.4
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 1.7e-14 83.6 149 38.3
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 8.2e-14 81.3 125 38.4
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 8.2e-14 81.3 125 38.4
QL10p030347 Quercus lobata HOM05D019990 ORTHO05D007789 1.8e-13 80.1 125 38.4
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 6.9e-13 78.2 115 40.9
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 9.1e-13 77.8 101 45.5
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 9.1e-13 77.8 147 35.4
QL10p030090 Quercus lobata HOM05D019990 ORTHO05D007789 1.5e-12 77.0 160 37.5
Lj1A786G23 Lonicera japonica HOM05D011954 ORTHO05D014236 2.0e-12 76.6 121 37.2
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.5e-12 75.5 119 36.1
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 4.5e-12 75.5 115 40.9
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.9e-12 75.1 147 37.4
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.7e-11 73.6 122 37.7
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.7e-11 73.6 122 37.7
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.8e-11 72.4 122 37.7
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 3.2e-10 69.3 137 35.8
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.2e-10 68.9 181 32.0
Cc02_g24850 Coffea canephora HOM05D021019 ORTHO05D010647 4.2e-10 68.9 140 34.3
Rhsim12G0082000 Rhododendron simsii HOM05D009663 ORTHO05D007789 4.2e-10 68.9 126 34.9
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 9.4e-10 67.8 110 39.1
RhsimUnG0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.2e-09 67.4 98 43.9
Rhsim13G0019200 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.6e-09 67.0 95 40.0
Rhsim08G0153800 Rhododendron simsii HOM05D042119 ORTHO05D007789 6.1e-09 65.1 137 33.6
TWI73G0112 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 6.1e-09 65.1 181 31.5
vmacro16961 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 8.0e-09 64.7 137 33.6
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.0e-08 64.3 118 33.9
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 1.0e-08 64.3 126 38.1
Lj1A748T28 Lonicera japonica HOM05D011954 ORTHO05D014236 1.0e-08 64.3 124 37.1
Rhsim13G0014700 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.0e-08 64.3 107 38.3
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 1.4e-08 63.9 152 28.9
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 1.4e-08 63.9 152 28.9
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.4e-08 63.9 118 33.9
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.8e-08 63.5 104 41.3
TWI73G0560 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.8e-08 63.5 183 29.5
TWI73G1234 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.8e-08 63.5 183 29.5
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 2.3e-08 63.2 152 28.3
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.3e-08 63.2 118 33.9
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 3.0e-08 62.8 143 32.2
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 6.7e-08 61.6 151 29.8
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 6.7e-08 61.6 151 29.8
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 8.8e-08 61.2 152 28.9
Dinv41577 Davidia involucrata HOM05D008623 ORTHO05D007789 8.8e-08 61.2 107 36.4
TWI36G0611 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 8.8e-08 61.2 115 36.5
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-07 60.8 158 29.1
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-07 60.8 158 29.1
PGSC0003DMG400012275 Solanum tuberosum HOM05D008744 ORTHO05D010647 1.1e-07 60.8 120 32.5
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.0e-07 60.1 173 31.2
Rhsim12G0199500 Rhododendron simsii HOM05D000727 ORTHO05D000541 2.0e-07 60.1 107 40.2
Thecc.01G408800 Theobroma cacao HOM05D008623 ORTHO05D007789 2.0e-07 60.1 92 34.8
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 3.3e-07 59.3 156 28.8
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 3.3e-07 59.3 122 31.1
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 3.3e-07 59.3 122 31.1
arahy.Tifrunner.gnm1.ann1.52E6WN Arachis hypogaea HOM05D010841 ORTHO05D007789 4.4e-07 58.9 90 38.9
arahy.Tifrunner.gnm1.ann1.B6M36H Arachis hypogaea HOM05D010841 ORTHO05D007789 4.4e-07 58.9 90 38.9
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 4.4e-07 58.9 153 29.4
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 4.4e-07 58.9 153 29.4
COL.COLO4_08085 Corchorus olitorius HOM05D016489 ORTHO05D007789 4.4e-07 58.9 125 36.0
CSS0008827 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.7e-07 58.5 135 31.9
Rhsim12G0034900 Rhododendron simsii HOM05D042119 ORTHO05D007789 5.7e-07 58.5 157 35.0
arahy.Tifrunner.gnm1.ann1.E31NWF Arachis hypogaea HOM05D010841 ORTHO05D007789 7.4e-07 58.2 90 38.9
Duzib168G1026 Durio zibethinus HOM05D016489 ORTHO05D007789 7.4e-07 58.2 119 32.8
Duzib168G2238 Durio zibethinus HOM05D016489 ORTHO05D007789 7.4e-07 58.2 119 32.8
PGR083G2548 Punica granatum HOM05D008623 ORTHO05D007789 7.4e-07 58.2 125 33.6
Rhsim09G0029000 Rhododendron simsii HOM05D009663 ORTHO05D007789 7.4e-07 58.2 137 35.0
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 9.7e-07 57.8 153 28.1
BcaC07g39850 Brassica carinata HOM05D002666 ORTHO05D004769 9.7e-07 57.8 121 35.5
A09p48260 Brassica napus HOM05D002666 ORTHO05D004769 9.7e-07 57.8 121 35.5
C08p30530 Brassica napus HOM05D002666 ORTHO05D004769 9.7e-07 57.8 121 35.5
C08p30560 Brassica napus HOM05D002666 ORTHO05D004769 9.7e-07 57.8 121 35.5
BolC8t50673H Brassica oleracea HOM05D002666 ORTHO05D004769 9.7e-07 57.8 121 35.5
BraA09t40279Z Brassica rapa HOM05D002666 ORTHO05D004769 9.7e-07 57.8 121 35.5
CSS0021925 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 9.7e-07 57.8 118 33.1
Rhsim10G0165100 Rhododendron simsii HOM05D009663 ORTHO05D007789 9.7e-07 57.8 97 38.1
RhsimUnG0120400 Rhododendron simsii HOM05D009663 ORTHO05D007789 9.7e-07 57.8 88 37.5
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 9.7e-07 57.8 79 38.0
Duzib168G1555 Durio zibethinus HOM05D016489 ORTHO05D007789 1.3e-06 57.4 119 32.8
Duzib187G0243 Durio zibethinus HOM05D016489 ORTHO05D007789 1.3e-06 57.4 199 25.1
Rhsim06G0038100 Rhododendron simsii HOM05D038451 ORTHO05D007789 1.3e-06 57.4 160 32.5
Aa31LG8G17520 Aethionema arabicum HOM05D002666 ORTHO05D004769 1.7e-06 57.0 137 32.1
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.7e-06 57.0 140 29.3
arahy.Tifrunner.gnm1.ann1.U7E3JB Arachis hypogaea HOM05D010841 ORTHO05D007789 1.7e-06 57.0 91 36.3
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 2.2e-06 56.6 138 31.9
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.2e-06 56.6 90 42.2
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 2.8e-06 56.2 122 32.0
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.7e-06 55.8 127 27.6
AL5G33880 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 4.8e-06 55.5 165 27.3
Sed0023023 Sechium edule HOM05D008623 ORTHO05D007789 4.8e-06 55.5 119 33.6
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 6.3e-06 55.1 127 28.3
A04p29060 Brassica napus HOM05D002666 ORTHO05D004769 6.3e-06 55.1 95 38.9
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 6.3e-06 55.1 125 31.2
TWI36G0009 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 6.3e-06 55.1 198 26.3
TWI36G0661 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 6.3e-06 55.1 115 29.6
QL04p003256 Quercus lobata HOM05D019990 ORTHO05D007789 8.2e-06 54.7 136 33.1
Sed0015244 Sechium edule HOM05D008623 ORTHO05D007789 8.2e-06 54.7 126 28.6


User provided reference genes

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