Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001700 Camellia sinensis var. sinensis HOM05D020954 ORTHO05D001891 4.1e-40 167.5 81 100.0
CSS0032166 Camellia sinensis var. sinensis HOM05D020954 ORTHO05D112774 1.6e-36 155.6 81 93.8
CSS0033053 Camellia sinensis var. sinensis HOM05D020954 ORTHO05D108908 1.6e-36 155.6 81 93.8
CSS0044764 Camellia sinensis var. sinensis HOM05D020954 ORTHO05D111941 1.6e-36 155.6 81 93.8
CSS0021411 Camellia sinensis var. sinensis HOM05D020954 ORTHO05D001891 7.8e-31 136.7 76 89.5
CSS0026187 Camellia sinensis var. sinensis HOM05D020954 ORTHO05D001891 7.8e-31 136.7 76 89.5
CSS0011993 Camellia sinensis var. sinensis HOM05D001931 ORTHO05D001891 1.4e-08 62.8 56 58.9
TAR626G1799 Trochodendron aralioides HOM05D001931 ORTHO05D001891 7.1e-08 60.5 31 77.4
CSS0006342 Camellia sinensis var. sinensis HOM05D001931 ORTHO05D001891 9.2e-08 60.1 27 92.6
CSS0031829 Camellia sinensis var. sinensis HOM05D001931 ORTHO05D001891 2.7e-07 58.5 29 86.2
TAR383G0069 Trochodendron aralioides HOM05D001931 ORTHO05D001891 4.6e-07 57.8 27 85.2
CSS0026409 Camellia sinensis var. sinensis HOM05D001931 ORTHO05D001891 6.0e-07 57.4 27 88.9
CSS0033628 Camellia sinensis var. sinensis HOM05D001931 ORTHO05D001891 6.0e-07 57.4 27 88.9
Duzib168G1594 Durio zibethinus HOM05D001931 ORTHO05D001891 1.3e-06 56.2 27 85.2
Thecc.09G159000 Theobroma cacao HOM05D001931 ORTHO05D001891 1.3e-06 56.2 27 85.2
Hund29124 Selenicereus undatus HOM05D001931 ORTHO05D001891 2.3e-06 55.5 28 78.6
Aqoxy7G03249 Aquilegia oxysepala HOM05D001931 ORTHO05D001891 3.0e-06 55.1 27 81.5
Ciclev10010074m.g Citrus clementina HOM05D001931 ORTHO05D001891 3.0e-06 55.1 27 81.5
Duzib187G0379 Durio zibethinus HOM05D001931 ORTHO05D001891 3.0e-06 55.1 27 81.5
FvH4_4g10230 Fragaria vesca HOM05D001931 ORTHO05D001891 3.0e-06 55.1 27 81.5
FAN07G1760 Fragaria x ananassa HOM05D001931 ORTHO05D001891 3.0e-06 55.1 27 81.5
FAN12G0794 Fragaria x ananassa HOM05D001931 ORTHO05D001891 3.0e-06 55.1 27 81.5
FAN12G3556 Fragaria x ananassa HOM05D001931 ORTHO05D001891 3.0e-06 55.1 27 81.5
FAN22G0567 Fragaria x ananassa HOM05D001931 ORTHO05D001891 3.0e-06 55.1 27 81.5
Prupe.1G098600 Prunus persica HOM05D001931 ORTHO05D001891 3.0e-06 55.1 27 81.5
Dinv41312 Davidia involucrata HOM05D001931 ORTHO05D001891 3.9e-06 54.7 27 81.5
RcHm_v2.0_Chr4g0405051 Rosa chinensis HOM05D001931 ORTHO05D001891 3.9e-06 54.7 27 81.5
Dinv42791 Davidia involucrata HOM05D001931 ORTHO05D001891 5.1e-06 54.3 28 75.0
Lj4g0007174 Lotus japonicus HOM05D001931 ORTHO05D001891 5.1e-06 54.3 27 81.5
Ah.14g084160 Amaranthus hybridus HOM05D001931 ORTHO05D001891 6.6e-06 53.9 27 77.8
arahy.Tifrunner.gnm1.ann1.U0VU98 Arachis hypogaea HOM05D001931 ORTHO05D001891 6.6e-06 53.9 27 77.8
Glyma.13G090900 Glycine max HOM05D001931 ORTHO05D001891 6.6e-06 53.9 27 81.5
Glyma.17G069400 Glycine max HOM05D001931 ORTHO05D001891 6.6e-06 53.9 27 81.5
Gohir.A08G093300 Gossypium hirsutum HOM05D001931 ORTHO05D001891 6.6e-06 53.9 27 77.8
Gohir.D08G097600 Gossypium hirsutum HOM05D001931 ORTHO05D001891 6.6e-06 53.9 27 77.8
Gorai.004G104700 Gossypium raimondii HOM05D001931 ORTHO05D001891 6.6e-06 53.9 27 77.8
Manes.14G163400 Manihot esculenta HOM05D001931 ORTHO05D001891 6.6e-06 53.9 27 77.8
Manes.14G163500 Manihot esculenta HOM05D001931 ORTHO05D001891 6.6e-06 53.9 27 77.8
CANSAT11G1179 Cannabis sativa HOM05D001931 ORTHO05D001891 8.6e-06 53.5 27 77.8
Dinv43310 Davidia involucrata HOM05D001931 ORTHO05D001891 8.6e-06 53.5 27 77.8
Hund29126 Selenicereus undatus HOM05D001931 ORTHO05D001891 8.6e-06 53.5 27 77.8


User provided reference genes

Program Settings