Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 0.0e+00 1551.2 790 100.0
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 0.0e+00 1540.0 790 99.4
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 1.2e-256 890.2 794 62.3
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 2.1e-213 746.5 793 55.1
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 2.8e-202 709.5 802 53.7
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 1.9e-126 457.6 769 42.0
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 2.6e-123 447.2 663 45.9
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 9.3e-121 438.7 805 39.9
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 5.5e-113 412.9 802 39.5
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 7.4e-110 402.5 948 34.5
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 9.6e-110 402.1 887 35.2
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 9.3e-105 385.6 819 36.4
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 1.6e-104 384.8 779 38.0
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 6.1e-104 382.9 832 37.4
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 3.3e-102 377.1 891 35.2
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 1.5e-99 368.2 806 36.4
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 3.4e-99 367.1 889 34.2
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 1.0e-98 365.5 819 35.2
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 3.6e-96 357.1 796 35.3
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 7.4e-94 349.4 809 36.1
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 4.8e-93 346.7 817 34.5
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 9.1e-92 342.4 796 34.9
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 1.5e-91 341.7 951 31.9
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 7.7e-91 339.3 715 37.6
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 2.5e-89 334.3 907 32.0
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 2.5e-89 334.3 843 34.8
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 1.6e-88 331.6 883 32.6
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 1.0e-87 328.9 801 35.7
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 9.1e-84 315.8 818 34.2
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 1.2e-83 315.5 883 33.1
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.6e-83 315.1 885 31.6
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 1.5e-81 308.5 878 33.8
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 5.5e-81 306.6 1003 30.6
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 1.6e-80 305.1 715 34.8
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 2.8e-77 294.3 750 34.4
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 8.2e-77 292.7 812 34.1
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 9.1e-76 289.3 818 34.6
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 1.6e-75 288.5 816 33.8
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 7.7e-75 286.2 830 32.7
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 7.7e-75 286.2 266 56.8
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 8.5e-74 282.7 815 34.0
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 7.2e-73 279.6 816 33.3
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 8.0e-72 276.2 841 31.7
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 1.5e-70 271.9 866 29.8
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 4.4e-70 270.4 1071 28.5
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 2.2e-69 268.1 225 64.0
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 4.8e-69 266.9 923 30.1
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 6.3e-69 266.5 814 33.3
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 2.4e-68 264.6 810 31.2
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 7.0e-68 263.1 1008 29.9
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 9.1e-68 262.7 840 30.1
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 1.2e-67 262.3 974 28.9
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 1.7e-66 258.5 842 31.8
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 1.7e-66 258.5 992 28.5
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 8.6e-66 256.1 807 31.2
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 3.6e-64 250.8 843 30.8
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 1.4e-63 248.8 834 30.2
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 4.0e-63 247.3 339 47.8
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 1.5e-62 245.4 820 31.0
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 1.3e-61 242.3 825 30.9
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 9.2e-60 236.1 812 29.7
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 2.7e-59 234.6 318 46.5
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 2.9e-58 231.1 832 30.9
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 4.3e-57 227.3 805 29.3
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 7.3e-57 226.5 841 29.4
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 1.8e-55 221.9 852 28.6
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 1.8e-55 221.9 922 28.6
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 8.9e-55 219.5 222 55.9
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 1.2e-54 219.2 866 28.8
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 1.5e-54 218.8 801 31.0
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 1.8e-52 211.8 868 28.5
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 4.1e-52 210.7 385 37.9
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 7.0e-52 209.9 811 27.7
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 1.6e-51 208.8 236 50.4
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 1.6e-51 208.8 894 28.3
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 2.7e-51 208.0 811 27.7
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 1.9e-49 201.8 1088 26.7
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 1.6e-48 198.7 898 27.4
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 3.1e-47 194.5 855 27.4
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 6.8e-47 193.4 175 58.3
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.2e-46 192.6 200 54.0
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 1.5e-46 192.2 929 25.9
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 1.1e-44 186.0 671 30.6
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 2.4e-44 184.9 809 27.7
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 4.1e-44 184.1 391 35.3
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 1.2e-43 182.6 402 35.1
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 1.6e-43 182.2 810 26.3
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 1.9e-41 175.3 813 26.1
Lj4P42T20 Lonicera japonica HOM05D005945 ORTHO05D006749 3.3e-41 174.5 386 39.6
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 4.3e-41 174.1 516 30.4
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 2.1e-40 171.8 811 28.2
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 3.6e-40 171.0 859 26.1
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 3.6e-40 171.0 859 26.1
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 6.2e-40 170.2 855 26.0
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 5.2e-39 167.2 864 25.6
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 5.2e-39 167.2 864 25.6
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 6.8e-39 166.8 519 30.6
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 4.4e-38 164.1 808 25.4
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 4.4e-38 164.1 867 26.8
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 1.4e-36 159.1 869 24.9
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 2.4e-36 158.3 286 35.3
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 1.6e-35 155.6 885 26.0
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 4.6e-35 154.1 262 41.2
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 7.8e-35 153.3 362 34.0
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 5.1e-34 150.6 255 40.0
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 1.1e-33 149.4 253 38.3
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 9.5e-33 146.4 968 24.0
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 1.6e-32 145.6 779 26.4
Atru.chr13.504 Acer truncatum HOM05D005945 ORTHO05D006749 3.6e-32 144.4 295 36.3
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 7.6e-30 136.7 246 37.4
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 1.7e-29 135.6 331 33.8
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 1.9e-28 132.1 219 37.9
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 5.4e-28 130.6 249 36.5
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.1e-25 122.9 939 23.9
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 1.6e-24 119.0 132 50.0
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 2.8e-24 118.2 222 34.2
Sc18g0006320 Simmondsia chinensis HOM05D005945 ORTHO05D006749 1.9e-20 105.5 377 31.3
TAR381G0602 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.0e-18 99.8 155 42.6
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 1.9e-12 79.0 123 37.4
CDE04G3738 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 1.1e-09 69.7 235 27.2
Pp3c7_23790 Physcomitrium patens HOM05D036654 ORTHO05D050357 1.9e-09 68.9 207 29.0
HPP92_021280 Vanilla planifolia HOM05D050438 ORTHO05D006749 5.6e-09 67.4 299 28.8
Mapoly0005s0138 Marchantia polymorpha HOM05D036654 ORTHO05D006749 1.6e-08 65.9 176 30.1
Gohir.A03G078400 Gossypium hirsutum HOM05D005945 ORTHO05D006749 2.1e-08 65.5 358 26.3
Sabra02G0199400 Salix brachista HOM05D005945 ORTHO05D006749 8.1e-08 63.5 78 44.9
SEGI_18222 Sequoiadendron giganteum HOM05D007138 ORTHO05D009148 8.1e-08 63.5 120 34.2
Potri.002G262601 Populus trichocarpa HOM05D005945 ORTHO05D006749 1.4e-07 62.8 134 35.1


User provided reference genes

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