Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 2.2e-86 322.4 178 100.0
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 1.5e-79 299.7 170 97.1
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 1.2e-55 220.3 174 73.0
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 7.9e-52 207.6 163 77.3
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 6.2e-49 198.0 174 68.4
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 5.3e-48 194.9 175 68.0
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 9.0e-48 194.1 178 68.5
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 1.3e-46 190.3 175 69.1
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.1e-45 187.2 182 63.7
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 4.2e-45 185.3 175 63.4
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 1.6e-44 183.3 171 67.3
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 2.7e-44 182.6 177 63.3
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 3.5e-44 182.2 175 65.7
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 1.3e-43 180.3 172 65.7
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 5.6e-42 174.9 167 66.5
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 5.6e-42 174.9 169 63.9
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 1.1e-40 170.6 171 62.6
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 1.4e-40 170.2 173 62.4
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 1.5e-39 166.8 172 64.0
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 1.5e-39 166.8 172 64.0
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 2.0e-39 166.4 175 61.7
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 4.5e-39 165.2 173 63.0
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 5.8e-39 164.9 162 64.8
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 2.2e-38 162.9 173 60.1
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 6.5e-38 161.4 175 58.9
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 8.4e-38 161.0 167 62.3
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 2.5e-37 159.5 173 54.3
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 1.2e-36 157.1 175 59.4
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 2.1e-36 156.4 173 58.4
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 4.6e-36 155.2 176 57.4
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 1.5e-34 150.2 174 59.8
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 3.3e-34 149.1 175 59.4
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 4.3e-34 148.7 174 55.2
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 5.7e-34 148.3 176 54.5
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 9.7e-34 147.5 168 58.3
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 1.3e-33 147.1 175 58.3
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.3e-33 147.1 169 58.6
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 4.8e-33 145.2 168 52.4
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 8.2e-33 144.4 168 59.5
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 8.2e-33 144.4 168 57.1
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 1.8e-32 143.3 155 61.3
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 4.1e-32 142.1 157 58.6
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 5.3e-32 141.7 183 54.6
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 6.9e-32 141.4 171 56.1
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 6.9e-32 141.4 163 54.6
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 9.0e-32 141.0 168 57.7
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 1.5e-31 140.2 175 57.1
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 1.5e-31 140.2 173 56.1
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 2.0e-31 139.8 172 55.8
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 2.0e-31 139.8 172 55.2
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 2.6e-31 139.4 172 55.2
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 2.6e-31 139.4 144 64.6
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 5.9e-31 138.3 171 49.1
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 7.6e-31 137.9 174 56.9
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 7.6e-31 137.9 169 58.6
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 1.0e-30 137.5 156 56.4
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 1.0e-30 137.5 145 64.8
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 1.3e-30 137.1 166 54.8
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 1.3e-30 137.1 173 57.2
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 1.7e-30 136.7 145 64.8
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 1.7e-30 136.7 175 53.7
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 2.2e-30 136.3 129 68.2
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 2.2e-30 136.3 145 64.1
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 2.9e-30 136.0 173 56.6
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.9e-30 136.0 173 56.6
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.9e-30 136.0 173 56.6
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 3.8e-30 135.6 156 57.7
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 6.5e-30 134.8 171 54.4
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 8.5e-30 134.4 171 54.4
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 8.5e-30 134.4 171 54.4
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 8.5e-30 134.4 173 54.9
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 1.1e-29 134.0 172 54.1
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 2.5e-29 132.9 130 68.5
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 3.2e-29 132.5 174 55.2
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 4.2e-29 132.1 151 59.6
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 9.3e-29 131.0 156 57.1
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 9.3e-29 131.0 133 64.7
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 1.6e-28 130.2 171 53.8
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 2.1e-28 129.8 174 56.3
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 3.6e-28 129.0 172 54.1
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 7.9e-28 127.9 170 52.9
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 7.9e-28 127.9 169 53.3
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 1.3e-27 127.1 169 55.0
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 1.3e-27 127.1 168 54.8
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 2.3e-27 126.3 116 74.1
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 1.1e-26 124.0 147 61.2
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 9.7e-26 120.9 159 54.7
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 2.4e-24 116.3 174 50.0
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 1.2e-23 114.0 152 59.2
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 2.6e-23 112.8 98 76.5
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 1.7e-22 110.2 172 50.6
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 6.5e-22 108.2 168 48.2
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 5.5e-21 105.1 172 48.8
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 1.2e-20 104.0 148 53.4
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.4e-19 100.5 78 79.5
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 8.8e-19 97.8 127 55.9
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 1.5e-18 97.1 122 47.5
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 9.7e-18 94.4 168 44.6
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 4.5e-15 85.5 125 50.4
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 2.2e-14 83.2 99 59.6
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 3.8e-14 82.4 82 69.5
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 5.0e-14 82.0 94 56.4
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 6.1e-12 75.1 83 62.7
AUR62044264 Chenopodium quinoa HOM05D007523 ORTHO05D009520 9.7e-10 67.8 132 53.0
CDE02G3979 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 5.3e-08 62.0 116 35.3


User provided reference genes

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