Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001687 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.4e-46 187.6 93 100.0
CSS0021158 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-40 168.3 92 90.2
CSS0007683 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.5e-35 151.4 97 82.5
Rhsim04G0108900 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.3e-17 91.7 69 62.3
Rhsim05G0062600 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.3e-17 91.7 84 53.6
CSS0045870 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-16 88.2 84 53.6
Rhsim09G0019300 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.1e-16 87.0 65 66.2
CSS0034941 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-15 85.9 84 52.4
CSS0007773 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-14 82.8 71 54.9
CSS0025416 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-14 82.4 81 53.1
CSS0003386 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-13 79.0 68 54.4
Lju225C4G4 Lonicera japonica HOM05D000002 ORTHO05D000001 6.4e-13 77.4 64 54.7
HanXRQChr07g0202651 Helianthus annuus HOM05D000002 ORTHO05D000001 3.5e-11 71.6 80 47.5
HanXRQChr11g0320201 Helianthus annuus HOM05D000002 ORTHO05D000001 1.7e-10 69.3 80 45.0
HanXRQChr10g0315391 Helianthus annuus HOM05D000002 ORTHO05D000001 2.3e-10 68.9 79 45.6
CsaV3_7G000640 Cucumis sativus L. HOM05D000002 ORTHO05D000001 1.1e-09 66.6 84 40.5
MELO3C013392.2 Cucumis melo HOM05D000002 ORTHO05D000001 1.5e-09 66.2 86 39.5
SEGI_13448 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.5e-09 65.5 88 45.5
TAR607G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.6e-09 64.3 74 44.6
Sabra01G0117000 Salix brachista HOM05D000002 ORTHO05D000001 1.3e-08 63.2 94 38.3
CSS0025925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-08 62.0 78 46.2
Migut.G00019 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.6e-08 61.6 90 43.3
CSS0008547 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-08 61.2 78 46.2
CSS0041353 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-08 61.2 78 46.2
RcHm_v2.0_Chr2g0117741 Rosa chinensis HOM05D000002 ORTHO05D000001 4.8e-08 61.2 81 45.7
Prupe.4G199600 Prunus persica HOM05D000002 ORTHO05D000001 6.2e-08 60.8 60 46.7
Dinv05898 Davidia involucrata HOM05D013570 ORTHO05D000001 8.1e-08 60.5 87 36.8
MD16G1247000 Malus domestica HOM05D000002 ORTHO05D003361 8.1e-08 60.5 72 45.8
Ciclev10030281m.g Citrus clementina HOM05D000132 ORTHO05D000058 2.4e-07 58.9 48 50.0
HanXRQChr17g0541461 Helianthus annuus HOM05D000002 ORTHO05D000001 2.4e-07 58.9 77 40.3
CSS0005755 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-07 58.5 80 41.2
CSS0017698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-07 58.5 78 44.9
ECA233G0266 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.0e-07 58.2 58 46.6
Oeu035908.1 Olea europaea HOM05D000002 ORTHO05D000001 4.0e-07 58.2 55 47.3
ECA246G2563 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-07 57.8 60 46.7
HanXRQChr01g0008001 Helianthus annuus HOM05D000002 ORTHO05D000001 5.3e-07 57.8 70 40.0
Oeu018031.1 Olea europaea HOM05D000002 ORTHO05D000001 5.3e-07 57.8 60 46.7
Oeu059914.1 Olea europaea HOM05D000002 ORTHO05D000001 5.3e-07 57.8 60 46.7
Sabra11G0010600 Salix brachista HOM05D000002 ORTHO05D000001 5.3e-07 57.8 59 42.4
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.3e-07 57.8 60 48.3
CSS0041837 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.9e-07 57.4 78 44.9
Nitab4.5_0000342g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 6.9e-07 57.4 45 57.8
HanXRQChr17g0568341 Helianthus annuus HOM05D000002 ORTHO05D000001 9.0e-07 57.0 62 48.4
Oeu005617.1 Olea europaea HOM05D000002 ORTHO05D000001 9.0e-07 57.0 60 46.7
Oeu012960.1 Olea europaea HOM05D000002 ORTHO05D000001 9.0e-07 57.0 60 46.7
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 9.0e-07 57.0 78 39.7
RcHm_v2.0_Chr5g0032551 Rosa chinensis HOM05D000002 ORTHO05D000001 1.2e-06 56.6 71 45.1
RcHm_v2.0_Chr2g0124571 Rosa chinensis HOM05D000011 ORTHO05D000157 1.5e-06 56.2 71 45.1
CSS0011950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-06 55.8 81 42.0
Hma1.2p1_0660F.1_g197730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.0e-06 55.8 79 36.7
TAR042G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.6e-06 55.5 63 44.4
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.4e-06 55.1 63 42.9
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.4e-06 55.1 63 42.9
Oeu019477.1 Olea europaea HOM05D000002 ORTHO05D000001 3.4e-06 55.1 60 46.7
TAR218G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.4e-06 55.1 52 44.2
CSS0034832 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.4e-06 54.7 71 42.3
CSS0034935 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.4e-06 54.7 73 42.5
ECA246G3670 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-06 54.7 69 42.0
Gorai.008G092500 Gossypium raimondii HOM05D000002 ORTHO05D000001 4.4e-06 54.7 76 43.4
Nn7g37430 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.4e-06 54.7 87 40.2
CSS0021283 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.8e-06 54.3 73 46.6
CSS0042232 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.8e-06 54.3 52 50.0
ECA236G2928 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-06 54.3 63 46.0
HanXRQChr09g0251421 Helianthus annuus HOM05D000530 ORTHO05D003341 5.8e-06 54.3 80 42.5
Hma1.2p1_0786F.1_g217740 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.8e-06 54.3 62 41.9
Atru.chr4.967 Acer truncatum HOM05D000002 ORTHO05D000001 7.6e-06 53.9 61 44.3
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.6e-06 53.9 48 50.0
FvH4_3g17262 Fragaria vesca HOM05D000002 ORTHO05D000001 7.6e-06 53.9 58 44.8
CSS0007133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.9e-06 53.5 61 42.6
Sed0010177 Sechium edule HOM05D000002 ORTHO05D000001 9.9e-06 53.5 68 38.2
Sopen04g024500 Solanum pennellii HOM05D000002 ORTHO05D000001 9.9e-06 53.5 67 40.3
VMungo0251G0530 Vigna mungo HOM05D000002 ORTHO05D037837 9.9e-06 53.5 56 42.9


User provided reference genes

Program Settings