Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 5.5e-99 364.4 195 100.0
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 3.5e-93 345.1 196 96.9
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 7.0e-62 241.1 200 73.0
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 6.6e-60 234.6 204 69.1
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 1.5e-59 233.4 167 76.0
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.6e-58 229.9 205 68.8
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 1.4e-57 226.9 198 71.2
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.2e-56 223.8 197 67.5
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.2e-56 223.8 197 67.5
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 5.8e-56 221.5 198 67.2
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 7.5e-56 221.1 226 63.3
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 4.9e-55 218.4 165 72.7
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 8.3e-55 217.6 166 72.3
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 5.4e-54 214.9 186 66.7
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 7.0e-54 214.5 200 66.5
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 9.2e-54 214.2 184 68.5
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 1.6e-53 213.4 199 68.3
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 2.0e-53 213.0 193 66.8
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 3.0e-52 209.1 185 65.9
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 3.9e-52 208.8 210 61.9
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 3.9e-52 208.8 168 68.5
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 5.0e-52 208.4 168 68.5
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 3.6e-50 202.2 200 62.5
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 3.6e-50 202.2 201 61.2
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 4.7e-50 201.8 202 63.4
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 8.1e-50 201.1 198 61.6
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 1.4e-49 200.3 165 66.7
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 6.8e-49 198.0 203 62.1
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 6.8e-49 198.0 199 61.8
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 1.5e-48 196.8 153 69.9
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 3.4e-48 195.7 225 54.7
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 3.4e-48 195.7 159 66.7
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 4.4e-48 195.3 207 59.4
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 5.8e-48 194.9 190 62.6
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 7.5e-48 194.5 171 64.9
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 7.5e-48 194.5 196 60.2
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 7.5e-48 194.5 163 67.5
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 7.5e-48 194.5 198 62.6
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 1.3e-47 193.7 185 60.5
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 2.2e-47 193.0 166 65.1
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 2.2e-47 193.0 215 61.4
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 2.2e-47 193.0 167 68.3
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 2.2e-47 193.0 193 61.7
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 2.9e-47 192.6 160 67.5
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 3.7e-47 192.2 184 63.0
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 6.4e-47 191.4 198 58.6
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 6.4e-47 191.4 185 63.2
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 1.1e-46 190.7 161 66.5
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 1.9e-46 189.9 203 61.1
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 3.2e-46 189.1 163 63.8
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 3.2e-46 189.1 171 66.7
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 3.2e-46 189.1 196 61.7
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 5.4e-46 188.3 136 72.8
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 7.1e-46 188.0 164 63.4
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 9.2e-46 187.6 210 56.7
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 1.2e-45 187.2 179 64.2
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 1.2e-45 187.2 198 58.6
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 2.1e-45 186.4 192 62.5
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 2.1e-45 186.4 159 65.4
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.3e-44 183.7 173 61.3
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 1.7e-44 183.3 206 57.8
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 2.3e-44 183.0 196 59.7
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 3.0e-44 182.6 167 61.1
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 3.0e-44 182.6 197 58.9
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 1.9e-43 179.9 155 65.2
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 5.6e-43 178.3 197 58.4
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 7.3e-43 177.9 194 56.7
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 1.6e-42 176.8 196 57.1
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 2.8e-42 176.0 206 56.3
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 4.7e-42 175.3 196 56.1
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.1e-41 174.1 166 59.6
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.4e-41 173.7 148 64.9
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 2.4e-41 172.9 143 69.9
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 5.2e-41 171.8 203 55.7
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 6.8e-41 171.4 195 55.9
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 6.8e-41 171.4 153 64.1
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 6.8e-41 171.4 168 59.5
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 8.9e-41 171.0 145 67.6
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 1.2e-40 170.6 194 55.7
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 1.2e-40 170.6 205 54.6
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 1.5e-40 170.2 164 59.8
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 2.0e-40 169.9 153 66.0
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 2.0e-40 169.9 153 66.0
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 3.4e-40 169.1 199 56.8
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 3.4e-40 169.1 199 56.8
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 3.4e-40 169.1 108 79.6
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 3.4e-40 169.1 201 55.2
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 7.6e-40 167.9 153 65.4
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 7.6e-40 167.9 193 53.9
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 6.4e-39 164.9 209 52.2
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 8.4e-39 164.5 192 53.1
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 1.4e-38 163.7 200 54.5
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 1.9e-38 163.3 203 52.2
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 9.2e-38 161.0 206 50.0
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 2.7e-37 159.5 155 55.5
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 3.5e-37 159.1 201 51.7
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 6.0e-37 158.3 106 69.8
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 7.8e-37 157.9 205 51.2
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 1.7e-36 156.8 153 58.2
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 3.0e-36 156.0 122 67.2
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 3.9e-36 155.6 115 69.6
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 3.3e-35 152.5 209 52.2
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 3.3e-35 152.5 106 74.5
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 2.0e-32 143.3 210 51.9
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 9.9e-32 141.0 88 79.5
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 3.2e-30 136.0 156 57.1
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 7.8e-29 131.3 142 54.9
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 6.9e-25 118.2 114 51.8
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 3.4e-24 115.9 101 53.5
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 2.2e-23 113.2 114 50.0
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 2.1e-21 106.7 109 51.4
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 5.1e-20 102.1 145 49.0
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 5.8e-16 88.6 72 59.7
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.7e-15 87.0 128 52.3
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 2.7e-13 79.7 145 41.4
Haze_03547 Corylus avellana HOM05D006993 ORTHO05D008336 1.3e-10 70.9 111 50.5


User provided reference genes

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