Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001598 Camellia sinensis var. sinensis HOM05D007507 ORTHO05D009420 1.2e-74 283.1 141 100.0
Actinidia16570 Actinidia chinensis HOM05D007507 ORTHO05D009420 8.7e-46 187.2 143 67.8
Actinidia05654 Actinidia chinensis HOM05D007507 ORTHO05D009420 1.8e-43 179.5 142 65.5
GSVIVG01021107001 Vitis vinifera HOM05D007507 ORTHO05D009420 8.7e-38 160.6 143 60.8
Thecc.06G181600 Theobroma cacao HOM05D007507 ORTHO05D009420 1.6e-36 156.4 142 56.3
TAR626G1744 Trochodendron aralioides HOM05D007507 ORTHO05D009420 3.7e-36 155.2 134 61.9
Dinv17350 Davidia involucrata HOM05D007507 ORTHO05D009420 2.4e-35 152.5 142 59.2
CiPaw.10G052300 Carya illinoinensis HOM05D007507 ORTHO05D009420 6.9e-35 151.0 142 57.0
Prupe.4G051900 Prunus persica HOM05D007507 ORTHO05D009420 1.0e-33 147.1 134 56.7
MD05G1310700 Malus domestica HOM05D007507 ORTHO05D009420 2.2e-33 146.0 139 55.4
RcHm_v2.0_Chr5g0009091 Rosa chinensis HOM05D007507 ORTHO05D009420 2.2e-33 146.0 142 56.3
Duzib235G0685 Durio zibethinus HOM05D007507 ORTHO05D009420 5.0e-33 144.8 141 54.6
FvH4_3g08680 Fragaria vesca HOM05D007507 ORTHO05D009420 8.5e-33 144.1 142 54.2
Glyma.07G201000 Glycine max HOM05D007507 ORTHO05D009420 1.1e-32 143.7 141 55.3
FAN21G1585 Fragaria x ananassa HOM05D007507 ORTHO05D009420 1.4e-32 143.3 142 54.9
Dinv40597 Davidia involucrata HOM05D007507 ORTHO05D009420 1.9e-32 142.9 150 58.7
MD10G1289800 Malus domestica HOM05D007507 ORTHO05D009420 2.5e-32 142.5 135 54.1
FAN11G0818 Fragaria x ananassa HOM05D007507 ORTHO05D009420 9.3e-32 140.6 143 54.5
Lalb_Chr20g0121601 Lupinus albus HOM05D007507 ORTHO05D009420 9.3e-32 140.6 141 51.8
Glyma.13G175400 Glycine max HOM05D007507 ORTHO05D009420 1.2e-31 140.2 141 52.5
QL05p042078 Quercus lobata HOM05D007507 ORTHO05D009420 2.7e-31 139.0 132 53.8
VMungo0251G0526 Vigna mungo HOM05D007507 ORTHO05D009420 4.6e-31 138.3 135 54.8
Duzib192G0611 Durio zibethinus HOM05D007507 ORTHO05D009420 1.0e-30 137.1 141 53.2
Lj4g0010126 Lotus japonicus HOM05D007507 ORTHO05D009420 1.3e-30 136.7 146 52.7
CANSAT35G2017 Cannabis sativa HOM05D007507 ORTHO05D009420 1.8e-30 136.3 141 54.6
Cc02_g13780 Coffea canephora HOM05D007507 ORTHO05D009420 1.8e-30 136.3 141 54.6
Cpa.g.sc27.9 Carica papaya HOM05D007507 ORTHO05D009420 3.0e-30 135.6 131 56.5
Lsat_1_v5_gn_7_22681 Lactuca sativa HOM05D007507 ORTHO05D009420 3.9e-30 135.2 140 57.1
Phvul.002G232000 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 1.9e-29 132.9 131 52.7
Glyma.15G077500 Glycine max HOM05D007507 ORTHO05D009420 2.5e-29 132.5 141 51.8
TPR.G39426 Trifolium pratense HOM05D007507 ORTHO05D009420 7.4e-29 131.0 140 50.0
Medtr4g088390 Medicago truncatula HOM05D007507 ORTHO05D009420 2.2e-28 129.4 143 53.8
Glyma.13G236200 Glycine max HOM05D007507 ORTHO05D009420 2.8e-28 129.0 142 52.1
Phvul.006G182800 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 2.8e-28 129.0 124 55.6
Potri.011G057400 Populus trichocarpa HOM05D007507 ORTHO05D009420 2.8e-28 129.0 144 52.8
Gohir.A09G073500 Gossypium hirsutum HOM05D007507 ORTHO05D009420 6.3e-28 127.9 139 50.4
Medtr2g014380 Medicago truncatula HOM05D007507 ORTHO05D009420 1.1e-27 127.1 139 48.9
Ciclev10016932m.g Citrus clementina HOM05D007507 ORTHO05D009420 1.4e-27 126.7 149 52.3
Gohir.D09G073200 Gossypium hirsutum HOM05D007507 ORTHO05D009420 1.8e-27 126.3 139 49.6
Gorai.006G088200 Gossypium raimondii HOM05D007507 ORTHO05D009420 1.8e-27 126.3 139 49.6
TPR.G19926 Trifolium pratense HOM05D007507 ORTHO05D009420 4.1e-27 125.2 141 51.8
arahy.Tifrunner.gnm1.ann1.UCBT0G Arachis hypogaea HOM05D007507 ORTHO05D009420 1.5e-26 123.2 144 51.4
HanXRQChr04g0113131 Helianthus annuus HOM05D007507 ORTHO05D009420 1.5e-26 123.2 144 50.0
MBI07_g29118_MAGBIO Magnolia biondii HOM05D007507 ORTHO05D009420 2.6e-26 122.5 142 47.9
PGSC0003DMG400031763 Solanum tuberosum HOM05D007507 ORTHO05D009420 2.6e-26 122.5 138 50.7
arahy.Tifrunner.gnm1.ann1.IERL18 Arachis hypogaea HOM05D007507 ORTHO05D009420 5.9e-26 121.3 144 51.4
DCAR_004049 Daucus carota HOM05D007507 ORTHO05D009420 7.7e-26 120.9 138 52.9
Psat7g115600 Pisum sativum HOM05D007507 ORTHO05D009420 7.7e-26 120.9 147 51.0
Nn1g04226 Nelumbo nucifera HOM05D007507 ORTHO05D009420 1.0e-25 120.6 129 52.7
Gorai.010G158100 Gossypium raimondii HOM05D007507 ORTHO05D009420 1.3e-25 120.2 147 47.6
Manes.16G031300 Manihot esculenta HOM05D007507 ORTHO05D009420 1.3e-25 120.2 141 48.2
Sabra11G0039300 Salix brachista HOM05D007507 ORTHO05D009420 1.3e-25 120.2 144 50.0
Potri.004G048201 Populus trichocarpa HOM05D007507 ORTHO05D009420 2.9e-25 119.0 143 51.0
Sabra04G0030100 Salix brachista HOM05D007507 ORTHO05D009420 2.9e-25 119.0 138 52.2
arahy.Tifrunner.gnm1.ann1.XNU6AG Arachis hypogaea HOM05D007507 ORTHO05D009420 3.8e-25 118.6 144 47.9
Gohir.A05G159400 Gossypium hirsutum HOM05D007507 ORTHO05D009420 3.8e-25 118.6 144 49.3
Hma1.2p1_0558F.1_g178550 Hydrangea macrophylla HOM05D007507 ORTHO05D009420 3.8e-25 118.6 122 56.6
Gohir.D06G135900 Gossypium hirsutum HOM05D007507 ORTHO05D009420 6.5e-25 117.9 147 47.6
MSTRG.14710 Avicennia marina HOM05D007507 ORTHO05D009420 1.1e-24 117.1 135 49.6
Eucgr.E03247 Eucalyptus grandis HOM05D007507 ORTHO05D009420 1.4e-24 116.7 142 51.4
Solyc02g077720.4 Solanum lycopersicum HOM05D007507 ORTHO05D009420 1.9e-24 116.3 143 46.9
Sopen02g022610 Solanum pennellii HOM05D007507 ORTHO05D009420 1.9e-24 116.3 143 47.6
arahy.Tifrunner.gnm1.ann1.26E61A Arachis hypogaea HOM05D007507 ORTHO05D009420 3.2e-24 115.5 136 49.3
Atru.chr10.1803 Acer truncatum HOM05D007507 ORTHO05D009420 7.2e-24 114.4 155 47.1
Gohir.D05G162100 Gossypium hirsutum HOM05D007507 ORTHO05D009420 7.2e-24 114.4 144 47.2
Gorai.009G167100 Gossypium raimondii HOM05D007507 ORTHO05D009420 7.2e-24 114.4 140 47.9
Manes.17G048900 Manihot esculenta HOM05D007507 ORTHO05D009420 7.2e-24 114.4 135 53.3
VMungo0540G0304 Vigna mungo HOM05D007507 ORTHO05D009420 2.1e-23 112.8 140 47.9
ClCG01G023220 Citrullus lanatus HOM05D007507 ORTHO05D009420 2.0e-21 106.3 143 43.4
Migut.H01473 Erythranthe guttata HOM05D007507 ORTHO05D009420 5.7e-21 104.8 137 47.4
ECA236G3296 Erigeron canadensis HOM05D007507 ORTHO05D009420 1.7e-20 103.2 103 54.4
Rhsim13G0180100 Rhododendron simsii HOM05D007507 ORTHO05D009420 1.7e-20 103.2 86 64.0
TWI38G1903 Tripterygium wilfordii HOM05D007507 ORTHO05D009420 2.8e-20 102.4 139 46.8
Atru.chr10.1804 Acer truncatum HOM05D007507 ORTHO05D009420 8.2e-20 100.9 147 45.6
PSO675G6999 Papaver somniferum HOM05D007507 ORTHO05D009420 8.2e-20 100.9 140 42.1
Nitab4.5_0002813g0060 Nicotiana tabacum HOM05D007507 ORTHO05D009420 1.4e-19 100.1 117 52.1
PGR042G2392 Punica granatum HOM05D007507 ORTHO05D009420 4.1e-19 98.6 141 44.0
Aqoxy4G00641 Aquilegia oxysepala HOM05D007507 ORTHO05D009420 6.9e-19 97.8 127 49.6
Nitab4.5_0007893g0030 Nicotiana tabacum HOM05D007507 ORTHO05D009420 1.5e-18 96.7 117 51.3
Oeu015676.1 Olea europaea HOM05D007507 ORTHO05D009420 3.4e-18 95.5 122 52.5
CsaV3_6G050370 Cucumis sativus L. HOM05D007507 ORTHO05D009420 1.0e-17 94.0 145 42.1
Oeu027697.1 Olea europaea HOM05D007507 ORTHO05D009420 1.7e-17 93.2 124 49.2
DCAR_008007 Daucus carota HOM05D007507 ORTHO05D009420 2.9e-17 92.4 140 43.6
Haze_06387 Corylus avellana HOM05D007507 ORTHO05D009420 1.1e-16 90.5 142 40.8
Oeu064800.1 Olea europaea HOM05D007507 ORTHO05D009420 9.4e-16 87.4 123 47.2
Migut.M01111 Erythranthe guttata HOM05D007507 ORTHO05D009420 2.1e-15 86.3 137 43.1
Sed0011593 Sechium edule HOM05D007507 ORTHO05D009420 7.9e-15 84.3 122 43.4
PSO541G3558 Papaver somniferum HOM05D007507 ORTHO05D009420 2.3e-14 82.8 100 47.0
MELO3C007264.2 Cucumis melo HOM05D007507 ORTHO05D009420 2.2e-12 76.3 125 40.8
SalBow8G4682 Salvia bowleyana HOM05D007507 ORTHO05D009420 8.2e-12 74.3 133 41.4
SEGI_36970 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 2.4e-11 72.8 88 48.9
Psat1g203160 Pisum sativum HOM05D007507 ORTHO05D009420 5.3e-11 71.6 98 38.8
SalBow8G0489 Salvia bowleyana HOM05D007507 ORTHO05D009420 7.0e-11 71.2 68 58.8
SEGI_17757 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 7.0e-11 71.2 102 42.2
Peaxi162Scf00926g00516 Petunia axillaris HOM05D007507 ORTHO05D009420 2.9e-09 65.9 128 36.7
SEGI_35508 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 2.9e-09 65.9 73 49.3
EL10Ac8g20432 Beta vulgaris HOM05D007507 ORTHO05D009420 2.5e-08 62.8 86 45.3
SalBow8G0028 Salvia bowleyana HOM05D002091 ORTHO05D002140 1.6e-07 60.1 74 50.0
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 2.1e-07 59.7 79 44.3
Mapoly0541s0001 Marchantia polymorpha HOM05D007507 ORTHO05D009420 2.7e-07 59.3 80 46.2
PSO339G4025 Papaver somniferum HOM05D003527 ORTHO05D004099 8.0e-07 57.8 138 30.4
PSO384G3887 Papaver somniferum HOM05D003527 ORTHO05D004099 8.0e-07 57.8 138 30.4
Potri.006G084400 Populus trichocarpa HOM05D003527 ORTHO05D004099 8.0e-07 57.8 109 38.5
TWI31G0174 Tripterygium wilfordii HOM05D003527 ORTHO05D004099 1.0e-06 57.4 98 41.8
COL.COLO4_14818 Corchorus olitorius HOM05D003527 ORTHO05D004099 1.4e-06 57.0 69 52.2
TWI79G0031 Tripterygium wilfordii HOM05D003527 ORTHO05D004099 1.4e-06 57.0 97 40.2
arahy.Tifrunner.gnm1.ann1.PE4GJ8 Arachis hypogaea HOM05D000372 ORTHO05D009420 1.8e-06 56.6 52 61.5
CiPaw.09G191600 Carya illinoinensis HOM05D003527 ORTHO05D004099 1.8e-06 56.6 69 47.8
Lj2A96T67 Lonicera japonica HOM05D003527 ORTHO05D004099 1.8e-06 56.6 72 48.6
Nn2g10383 Nelumbo nucifera HOM05D003527 ORTHO05D004099 1.8e-06 56.6 73 46.6
Sabra09G0021000 Salix brachista HOM05D003527 ORTHO05D004099 1.8e-06 56.6 99 39.4
MBI14_g37823_MAGBIO Magnolia biondii HOM05D003527 ORTHO05D004099 2.3e-06 56.2 73 47.9
MD11G1110500 Malus domestica HOM05D003527 ORTHO05D004099 2.3e-06 56.2 78 42.3
TAR636G1653 Trochodendron aralioides HOM05D003527 ORTHO05D004099 2.3e-06 56.2 71 46.5
ATR0680G191 Amborella trichopoda HOM05D003527 ORTHO05D004099 3.0e-06 55.8 106 41.5
Aqoxy4G02910 Aquilegia oxysepala HOM05D003527 ORTHO05D004099 3.0e-06 55.8 73 47.9
MD03G1096000 Malus domestica HOM05D003527 ORTHO05D004099 3.0e-06 55.8 74 44.6
Oeu024354.1 Olea europaea HOM05D003527 ORTHO05D004099 3.0e-06 55.8 69 49.3
Sc12g0001550 Simmondsia chinensis HOM05D003527 ORTHO05D004099 3.0e-06 55.8 137 32.1
Haze_24084 Corylus avellana HOM05D003527 ORTHO05D004099 4.0e-06 55.5 69 46.4
Peaxi162Scf00165g01520 Petunia axillaris HOM05D003527 ORTHO05D004099 4.0e-06 55.5 72 48.6
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 5.2e-06 55.1 76 43.4
Duzib168G1608 Durio zibethinus HOM05D003527 ORTHO05D004099 5.2e-06 55.1 98 38.8
TAR633G1470 Trochodendron aralioides HOM05D003527 ORTHO05D004099 5.2e-06 55.1 98 39.8
Actinidia23946 Actinidia chinensis HOM05D003527 ORTHO05D004099 6.7e-06 54.7 99 37.4
Aqoxy2G02103 Aquilegia oxysepala HOM05D003527 ORTHO05D004099 6.7e-06 54.7 74 47.3
Duzib093G1072 Durio zibethinus HOM05D003527 ORTHO05D004099 6.7e-06 54.7 69 49.3
HanXRQChr08g0234711 Helianthus annuus HOM05D003527 ORTHO05D004099 6.7e-06 54.7 68 47.1
Potri.001G238900 Populus trichocarpa HOM05D003527 ORTHO05D004099 6.7e-06 54.7 95 40.0
RcHm_v2.0_Chr5g0064221 Rosa chinensis HOM05D003527 ORTHO05D004099 6.7e-06 54.7 75 45.3
VMungo1383G0208 Vigna mungo HOM05D003527 ORTHO05D004099 6.7e-06 54.7 72 48.6
CANSAT35G0216 Cannabis sativa HOM05D003527 ORTHO05D004099 8.8e-06 54.3 73 46.6
Ciclev10012740m.g Citrus clementina HOM05D003527 ORTHO05D004099 8.8e-06 54.3 68 47.1
CsaV3_3G034940 Cucumis sativus L. HOM05D003527 ORTHO05D004099 8.8e-06 54.3 112 34.8
Dinv12411 Davidia involucrata HOM05D003527 ORTHO05D004099 8.8e-06 54.3 73 45.2
Duzib128G0537 Durio zibethinus HOM05D003527 ORTHO05D004099 8.8e-06 54.3 69 49.3
Hma1.2p1_1513F.1_g288070 Hydrangea macrophylla HOM05D003527 ORTHO05D004099 8.8e-06 54.3 71 47.9
Manes.08G081800 Manihot esculenta HOM05D003527 ORTHO05D004099 8.8e-06 54.3 109 37.6


User provided reference genes

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