Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001594 Camellia sinensis var. sinensis HOM05D003593 ORTHO05D004064 2.9e-29 131.3 71 100.0
CSS0019003 Camellia sinensis var. sinensis HOM05D003593 ORTHO05D004064 1.3e-21 105.9 65 89.2
CSS0006561 Camellia sinensis var. sinensis HOM05D003593 ORTHO05D004064 8.3e-21 103.2 72 83.3
CSS0014982 Camellia sinensis var. sinensis HOM05D003593 ORTHO05D004064 1.9e-12 75.5 65 72.3
CSS0033341 Camellia sinensis var. sinensis HOM05D003593 ORTHO05D004064 1.9e-12 75.5 65 72.3
CSS0039493 Camellia sinensis var. sinensis HOM05D003593 ORTHO05D004064 1.9e-12 75.5 65 72.3
vmacro03823 Vaccinium macrocarpon HOM05D003593 ORTHO05D004064 1.6e-11 72.4 64 64.1
Rhsim01G0049400 Rhododendron simsii HOM05D003593 ORTHO05D004064 1.3e-10 69.3 65 61.5
Dinv34117 Davidia involucrata HOM05D003593 ORTHO05D004064 1.7e-10 68.9 64 60.9
Hma1.2p1_0571F.1_g180780 Hydrangea macrophylla HOM05D003593 ORTHO05D004064 3.0e-10 68.2 64 62.5
Hma1.2p1_1219F.1_g267880 Hydrangea macrophylla HOM05D003593 ORTHO05D004064 5.1e-10 67.4 64 62.5
CSS0041369 Camellia sinensis var. sinensis HOM05D003593 ORTHO05D004064 6.6e-10 67.0 65 58.5
Rhsim01G0266500 Rhododendron simsii HOM05D003593 ORTHO05D004064 8.6e-10 66.6 65 60.0
QL03p003406 Quercus lobata HOM05D003593 ORTHO05D004064 2.1e-08 62.0 65 56.9
QL03p003697 Quercus lobata HOM05D003593 ORTHO05D004064 2.1e-08 62.0 65 56.9
Cfa013477 Carpinus fangiana HOM05D003593 ORTHO05D004064 3.6e-08 61.2 65 50.8
CSS0030751 Camellia sinensis var. sinensis HOM05D003593 ORTHO05D004064 6.2e-08 60.5 85 44.7
Haze_22055 Corylus avellana HOM05D003593 ORTHO05D004064 1.4e-07 59.3 65 49.2
QL02p059634 Quercus lobata HOM05D003593 ORTHO05D004064 2.4e-07 58.5 65 55.4
MD13G1238800 Malus domestica HOM05D003593 ORTHO05D004064 3.1e-07 58.2 65 55.4
GSVIVG01029263001 Vitis vinifera HOM05D003593 ORTHO05D004064 3.1e-07 58.2 65 52.3
Ciclev10021956m.g Citrus clementina HOM05D003593 ORTHO05D004064 6.8e-07 57.0 65 50.8
Ciclev10032601m.g Citrus clementina HOM05D003593 ORTHO05D004064 6.8e-07 57.0 65 50.8
DCAR_007335 Daucus carota HOM05D003593 ORTHO05D002993 8.9e-07 56.6 63 54.0
Atru.chr1.1670 Acer truncatum HOM05D003593 ORTHO05D004064 1.2e-06 56.2 65 53.8
Sc03g0009620 Simmondsia chinensis HOM05D003593 ORTHO05D004064 2.0e-06 55.5 63 52.4
CiPaw.08G030900 Carya illinoinensis HOM05D003593 ORTHO05D004064 2.6e-06 55.1 66 48.5
Lsat_1_v5_gn_9_9120 Lactuca sativa HOM05D003593 ORTHO05D004064 3.4e-06 54.7 65 60.0
Prupe.2G148000 Prunus persica HOM05D003593 ORTHO05D004064 3.4e-06 54.7 64 53.1
Actinidia21188 Actinidia chinensis HOM05D003593 ORTHO05D004064 4.4e-06 54.3 65 53.8
Nn8g40907 Nelumbo nucifera HOM05D003593 ORTHO05D004064 4.4e-06 54.3 65 49.2
Lsat_1_v5_gn_8_91320 Lactuca sativa HOM05D003593 ORTHO05D004064 5.8e-06 53.9 66 56.1
Lj1C63T22 Lonicera japonica HOM05D003593 ORTHO05D004064 5.8e-06 53.9 65 52.3
RcHm_v2.0_Chr6g0268981 Rosa chinensis HOM05D003593 ORTHO05D004064 9.9e-06 53.1 65 52.3
GSVIVG01025934001 Vitis vinifera HOM05D003593 ORTHO05D004064 9.9e-06 53.1 65 50.8


User provided reference genes

Program Settings