Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001581 Camellia sinensis var. sinensis HOM05D007133 ORTHO05D008954 1.6e-42 175.6 88 100.0
Manes.10G136200 Manihot esculenta HOM05D007133 ORTHO05D008954 4.5e-32 141.0 87 79.3
Actinidia21538 Actinidia chinensis HOM05D007133 ORTHO05D008954 1.3e-31 139.4 89 83.1
vmacro21138 Vaccinium macrocarpon HOM05D007133 ORTHO05D008954 1.3e-31 139.4 87 81.6
COL.COLO4_12337 Corchorus olitorius HOM05D007133 ORTHO05D008954 1.7e-31 139.0 87 78.2
Nn7g36332 Nelumbo nucifera HOM05D007133 ORTHO05D008954 1.7e-31 139.0 87 80.5
Dinv03122 Davidia involucrata HOM05D007133 ORTHO05D008954 2.2e-31 138.7 85 82.4
Dinv09308 Davidia involucrata HOM05D007133 ORTHO05D008954 2.2e-31 138.7 85 82.4
Migut.N01798 Erythranthe guttata HOM05D007133 ORTHO05D008954 2.9e-31 138.3 87 79.3
Medtr0512s0010 Medicago truncatula HOM05D007133 ORTHO05D008954 2.9e-31 138.3 85 80.0
Cc02_g28790 Coffea canephora HOM05D007133 ORTHO05D008954 6.4e-31 137.1 88 78.4
Eucgr.G03322 Eucalyptus grandis HOM05D007133 ORTHO05D008954 8.4e-31 136.7 87 79.3
Gohir.A12G100700 Gossypium hirsutum HOM05D007133 ORTHO05D008954 8.4e-31 136.7 87 75.9
Gohir.D12G103551 Gossypium hirsutum HOM05D007133 ORTHO05D008954 8.4e-31 136.7 87 75.9
Gorai.008G112700 Gossypium raimondii HOM05D007133 ORTHO05D008954 8.4e-31 136.7 87 75.9
PGR031G3629 Punica granatum HOM05D007133 ORTHO05D008954 1.1e-30 136.3 87 75.9
Oeu027371.1 Olea europaea HOM05D007133 ORTHO05D008954 1.9e-30 135.6 87 78.2
Lalb_Chr25g0282521 Lupinus albus HOM05D007133 ORTHO05D008954 2.5e-30 135.2 85 78.8
Potri.001G262000 Populus trichocarpa HOM05D007133 ORTHO05D008954 3.2e-30 134.8 87 74.7
Potri.009G056800 Populus trichocarpa HOM05D007133 ORTHO05D008954 4.2e-30 134.4 87 75.9
RcHm_v2.0_Chr1g0318451 Rosa chinensis HOM05D007133 ORTHO05D008954 4.2e-30 134.4 87 77.0
Lalb_Chr04g0263851 Lupinus albus HOM05D007133 ORTHO05D008954 7.1e-30 133.7 88 76.1
arahy.Tifrunner.gnm1.ann1.1B9UE2 Arachis hypogaea HOM05D007133 ORTHO05D008954 9.3e-30 133.3 85 75.3
CiPaw.14G003100 Carya illinoinensis HOM05D007133 ORTHO05D008954 9.3e-30 133.3 87 73.6
Duzib268G0834 Durio zibethinus HOM05D007133 ORTHO05D008954 1.2e-29 132.9 83 74.7
FvH4_7g01820 Fragaria vesca HOM05D007133 ORTHO05D008954 3.5e-29 131.3 87 75.9
FAN01G1667 Fragaria x ananassa HOM05D007133 ORTHO05D008954 3.5e-29 131.3 87 75.9
TPR.G30180 Trifolium pratense HOM05D007133 ORTHO05D008954 3.5e-29 131.3 85 75.3
arahy.Tifrunner.gnm1.ann1.PZX0PK Arachis hypogaea HOM05D007133 ORTHO05D008954 4.6e-29 131.0 89 74.2
TWI53G1532 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 4.6e-29 131.0 87 73.6
Ciclev10033166m.g Citrus clementina HOM05D007133 ORTHO05D008954 6.0e-29 130.6 83 75.9
HanXRQChr06g0179721 Helianthus annuus HOM05D007133 ORTHO05D008954 1.3e-28 129.4 87 75.9
SGA_v2.0_scaffold5G02955 Striga asiatica HOM05D007133 ORTHO05D008954 1.3e-28 129.4 89 75.3
Thecc.01G406600 Theobroma cacao HOM05D007133 ORTHO05D008954 1.3e-28 129.4 87 70.1
TAR633G1269 Trochodendron aralioides HOM05D007133 ORTHO05D008954 1.3e-28 129.4 87 78.2
PSO063G0957 Papaver somniferum HOM05D007133 ORTHO05D008954 1.8e-28 129.0 87 77.0
Peaxi162Scf01270g00118 Petunia axillaris HOM05D007133 ORTHO05D008954 1.8e-28 129.0 87 73.6
Lsat_1_v5_gn_1_104961 Lactuca sativa HOM05D007133 ORTHO05D008954 3.9e-28 127.9 87 75.9
PSO170G5856 Papaver somniferum HOM05D007133 ORTHO05D008954 3.9e-28 127.9 87 75.9
Prupe.2G024400 Prunus persica HOM05D007133 ORTHO05D008954 3.9e-28 127.9 87 72.4
Sabra09G0041600 Salix brachista HOM05D007133 ORTHO05D008954 6.7e-28 127.1 87 72.4
Hund26515 Selenicereus undatus HOM05D007133 ORTHO05D008954 8.7e-28 126.7 87 73.6
TWI09G1631 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 1.1e-27 126.3 87 71.3
CsaV3_7G030730 Cucumis sativus L. HOM05D007133 ORTHO05D008954 1.5e-27 125.9 84 75.0
Glyma.09G226900 Glycine max HOM05D007133 ORTHO05D008954 1.5e-27 125.9 81 74.1
Glyma.12G009900 Glycine max HOM05D007133 ORTHO05D008954 1.5e-27 125.9 81 74.1
Phvul.001G156100 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 1.5e-27 125.9 88 72.7
Ca_26645_v3 Cicer arietinum L. HOM05D007133 ORTHO05D008954 1.9e-27 125.6 85 72.9
MD02G1300200 Malus domestica HOM05D007133 ORTHO05D008954 1.9e-27 125.6 87 70.1
GSVIVG01032212001 Vitis vinifera HOM05D007133 ORTHO05D008954 1.9e-27 125.6 87 74.7
Phvul.011G010800 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 2.5e-27 125.2 88 71.6
Sed0015487 Sechium edule HOM05D007133 ORTHO05D008954 2.5e-27 125.2 85 69.4
ECA248G0684 Erigeron canadensis HOM05D007133 ORTHO05D008954 7.4e-27 123.6 87 73.6
MD07G1024700 Malus domestica HOM05D007133 ORTHO05D008954 9.6e-27 123.2 77 76.6
Nitab4.5_0008942g0020 Nicotiana tabacum HOM05D007133 ORTHO05D008954 9.6e-27 123.2 87 72.4
Sc10g0000360 Simmondsia chinensis HOM05D007133 ORTHO05D008954 1.6e-26 122.5 77 77.9
Lj3g0009786 Lotus japonicus HOM05D007133 ORTHO05D008954 3.7e-26 121.3 87 69.0
Atru.chr11.2512 Acer truncatum HOM05D007133 ORTHO05D008954 6.2e-26 120.6 80 75.0
Zm00001eb332910 Zea mays HOM05D007133 ORTHO05D008954 8.2e-26 120.2 88 67.0
FAN10G0509 Fragaria x ananassa HOM05D007133 ORTHO05D008954 1.1e-25 119.8 85 69.4
THA.LOC104817576 Tarenaya hassleriana HOM05D007133 ORTHO05D008954 1.1e-25 119.8 77 72.7
EL10Ac2g04374 Beta vulgaris HOM05D007133 ORTHO05D008954 1.8e-25 119.0 87 70.1
CDE08G1151 Ceratophyllum demersum HOM05D007133 ORTHO05D008954 5.3e-25 117.5 81 74.1
AUR62023097 Chenopodium quinoa HOM05D007133 ORTHO05D008954 5.3e-25 117.5 87 67.8
MELO3C023583.2 Cucumis melo HOM05D007133 ORTHO05D008954 5.3e-25 117.5 98 64.3
AT3G52040 Arabidopsis thaliana HOM05D007133 ORTHO05D008954 2.6e-24 115.2 81 70.4
Carub.0005s1836 Capsella rubella HOM05D007133 ORTHO05D008954 2.6e-24 115.2 87 67.8
BcaB01g00452 Brassica carinata HOM05D007133 ORTHO05D008954 4.5e-24 114.4 87 64.4
C08p27290 Brassica napus HOM05D007133 ORTHO05D008954 4.5e-24 114.4 87 64.4
BolC8t50346H Brassica oleracea HOM05D007133 ORTHO05D008954 4.5e-24 114.4 87 64.4
Eucgr.G03325 Eucalyptus grandis HOM05D007133 ORTHO05D008954 7.6e-24 113.6 82 69.5
Aqoxy1G00141 Aquilegia oxysepala HOM05D007133 ORTHO05D008954 1.3e-23 112.8 87 67.8
A09p45100 Brassica napus HOM05D007133 ORTHO05D008954 1.7e-23 112.5 87 63.2
BraA09t39971Z Brassica rapa HOM05D007133 ORTHO05D008954 1.7e-23 112.5 87 63.2
Ah.10g038590 Amaranthus hybridus HOM05D007133 ORTHO05D008954 2.2e-23 112.1 81 67.9
BcaC06g33021 Brassica carinata HOM05D007133 ORTHO05D008954 2.2e-23 112.1 87 64.4
CANSAT80G0888 Cannabis sativa HOM05D007133 ORTHO05D008954 2.9e-23 111.7 77 71.4
Aa31LG10G7080 Aethionema arabicum HOM05D007133 ORTHO05D008954 4.9e-23 110.9 87 65.5
AL5G32580 Arabidopsis lyrata HOM05D007133 ORTHO05D008954 4.9e-23 110.9 82 70.7
Haze_03143 Corylus avellana HOM05D007133 ORTHO05D008954 4.9e-23 110.9 153 47.7
Haze_03146 Corylus avellana HOM05D007133 ORTHO05D008954 4.9e-23 110.9 153 47.7
SalBow6G3002 Salvia bowleyana HOM05D007133 ORTHO05D008954 4.9e-23 110.9 122 51.6
Thhalv10010861m.g Eutrema salsugineum HOM05D007133 ORTHO05D008954 8.4e-23 110.2 87 64.4
ClCG09G004410 Citrullus lanatus HOM05D007133 ORTHO05D008954 1.1e-22 109.8 112 54.5
Solyc01g087880.3 Solanum lycopersicum HOM05D007133 ORTHO05D008954 1.1e-22 109.8 83 71.1
Sopen01g034810 Solanum pennellii HOM05D007133 ORTHO05D008954 1.1e-22 109.8 83 71.1
C07p46740 Brassica napus HOM05D007133 ORTHO05D008954 1.4e-22 109.4 87 62.1
BolC7t45192H Brassica oleracea HOM05D007133 ORTHO05D008954 1.4e-22 109.4 87 62.1
BcaC06g33378 Brassica carinata HOM05D007133 ORTHO05D008954 1.9e-22 109.0 87 62.1
Nitab4.5_0001244g0090 Nicotiana tabacum HOM05D007133 ORTHO05D008954 1.9e-22 109.0 113 55.8
PGSC0003DMG400006836 Solanum tuberosum HOM05D007133 ORTHO05D008954 4.2e-22 107.8 83 69.9
unitig_8.g3622 Utricularia gibba HOM05D007133 ORTHO05D008954 1.2e-21 106.3 71 74.6
A03p48620 Brassica napus HOM05D007133 ORTHO05D008954 2.1e-21 105.5 87 62.1
BraA03t13967Z Brassica rapa HOM05D007133 ORTHO05D008954 1.0e-20 103.2 87 60.9
CARHR161670 Cardamine hirsuta HOM05D007133 ORTHO05D008954 1.0e-20 103.2 87 62.1
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 2.3e-20 102.1 83 67.5
Medtr4g101060 Medicago truncatula HOM05D007133 ORTHO05D008954 2.8e-18 95.1 59 76.3
Dinv09304 Davidia involucrata HOM05D007133 ORTHO05D008954 1.1e-17 93.2 56 82.1
MBI19_g09240_MAGBIO Magnolia biondii HOM05D007133 ORTHO05D008954 1.2e-16 89.7 195 34.4
Rhsim01G0126300 Rhododendron simsii HOM05D007133 ORTHO05D008954 4.2e-14 81.3 48 85.4
Mapoly0049s0103 Marchantia polymorpha HOM05D007133 ORTHO05D008954 5.5e-14 80.9 78 55.1
HPP92_001020 Vanilla planifolia HOM05D007133 ORTHO05D008954 7.2e-14 80.5 64 59.4
Psat7g197280 Pisum sativum HOM05D007133 ORTHO05D008954 9.4e-14 80.1 58 69.0
AagrBONN_evm.TU.Sc2ySwM_344.2738 Anthoceros agrestis HOM05D007133 ORTHO05D008954 1.6e-13 79.3 87 50.6
Pp3c9_17680 Physcomitrium patens HOM05D007133 ORTHO05D008954 2.7e-13 78.6 77 55.8
Hma1.2p1_0685F.1_g203210 Hydrangea macrophylla HOM05D007133 ORTHO05D008954 4.6e-13 77.8 49 81.6
QL04p010011 Quercus lobata HOM05D007133 ORTHO05D008954 1.0e-12 76.6 48 79.2
Duzib133G0944 Durio zibethinus HOM05D007133 ORTHO05D008954 2.3e-12 75.5 48 72.9
Os01g0271700 Oryza sativa ssp. japonica HOM05D007133 ORTHO05D008954 8.8e-12 73.6 48 72.9
Rhsim01G0126100 Rhododendron simsii HOM05D007133 ORTHO05D008954 1.8e-09 65.9 40 77.5
Cc00_g26940 Coffea canephora HOM05D007133 ORTHO05D008954 2.2e-07 58.9 54 63.0


User provided reference genes

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