Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001576 Camellia sinensis var. sinensis HOM05D003844 ORTHO05D024744 1.3e-34 149.1 72 100.0
Rhsim06G0035800 Rhododendron simsii HOM05D003844 ORTHO05D004534 6.1e-11 70.5 37 94.6
Gohir.A06G011600 Gossypium hirsutum HOM05D003844 ORTHO05D004534 3.0e-10 68.2 37 91.9
Gohir.D06G009000 Gossypium hirsutum HOM05D003844 ORTHO05D004534 3.0e-10 68.2 37 91.9
Gorai.010G011800 Gossypium raimondii HOM05D003844 ORTHO05D004534 3.0e-10 68.2 37 91.9
Lj1g0003038 Lotus japonicus HOM05D003844 ORTHO05D004534 6.7e-10 67.0 37 89.2
Psat3g033360 Pisum sativum HOM05D003844 ORTHO05D004534 6.7e-10 67.0 37 89.2
Hma1.2p1_0203F.1_g086610 Hydrangea macrophylla HOM05D003844 ORTHO05D004534 8.8e-10 66.6 37 86.5
Cpa.g.c28380.3 Carica papaya HOM05D003844 ORTHO05D004534 1.1e-09 66.2 37 89.2
Ca_09005_v3 Cicer arietinum L. HOM05D003844 ORTHO05D004534 1.1e-09 66.2 37 89.2
MD08G1032300 Malus domestica HOM05D003844 ORTHO05D004534 2.5e-09 65.1 37 81.1
CSS0015572 Camellia sinensis var. sinensis HOM05D003844 ORTHO05D004534 3.3e-09 64.7 37 86.5
Dinv36050 Davidia involucrata HOM05D003844 ORTHO05D004534 3.3e-09 64.7 37 86.5
Duzib093G0973 Durio zibethinus HOM05D003844 ORTHO05D004534 3.3e-09 64.7 37 86.5
Ciclev10001396m.g Citrus clementina HOM05D003844 ORTHO05D004534 4.3e-09 64.3 36 88.9
Atru.chr13.530 Acer truncatum HOM05D003844 ORTHO05D004534 5.7e-09 63.9 37 83.8
QL01p055646 Quercus lobata HOM05D064149 ORTHO05D024744 5.7e-09 63.9 38 78.9
VMungo1309G3156 Vigna mungo HOM05D003844 ORTHO05D004534 5.7e-09 63.9 69 53.6
COL.COLO4_26357 Corchorus olitorius HOM05D003844 ORTHO05D004534 7.4e-09 63.5 37 83.8
TPR.G19519 Trifolium pratense HOM05D003844 ORTHO05D004534 7.4e-09 63.5 37 86.5
Lj4A783T77 Lonicera japonica HOM05D003844 ORTHO05D004534 9.7e-09 63.2 37 81.1
Sabra14G0030700 Salix brachista HOM05D003844 ORTHO05D004534 9.7e-09 63.2 37 86.5
Haze_17631 Corylus avellana HOM05D003844 ORTHO05D004534 1.3e-08 62.8 37 83.8
Cfa018432 Carpinus fangiana HOM05D003844 ORTHO05D004534 1.7e-08 62.4 37 83.8
Lalb_Chr23g0266661 Lupinus albus HOM05D003844 ORTHO05D004534 1.7e-08 62.4 37 81.1
CAN.G1126.25 Capsicum annuum HOM05D003844 ORTHO05D004534 2.2e-08 62.0 42 69.0
Sopen04g033610 Solanum pennellii HOM05D003844 ORTHO05D004534 2.2e-08 62.0 42 69.0
PGSC0003DMG400027853 Solanum tuberosum HOM05D003844 ORTHO05D004534 2.2e-08 62.0 42 69.0
TAR628G0330 Trochodendron aralioides HOM05D003844 ORTHO05D004534 2.2e-08 62.0 56 60.7
SalBow8G1589 Salvia bowleyana HOM05D003844 ORTHO05D004534 2.8e-08 61.6 56 55.4
vmacro21621 Vaccinium macrocarpon HOM05D003844 ORTHO05D004534 2.8e-08 61.6 37 83.8
Cc10_g03240 Coffea canephora HOM05D003844 ORTHO05D004534 4.8e-08 60.8 69 49.3
Os05g0357800 Oryza sativa ssp. japonica HOM05D003844 ORTHO05D004534 4.8e-08 60.8 56 55.4
Medtr7g104580 Medicago truncatula HOM05D003844 ORTHO05D004534 6.3e-08 60.5 37 83.8
Actinidia15306 Actinidia chinensis HOM05D003844 ORTHO05D004534 8.2e-08 60.1 37 81.1
FAN15G3259 Fragaria x ananassa HOM05D003844 ORTHO05D004534 8.2e-08 60.1 37 75.7
FAN20G0087 Fragaria x ananassa HOM05D003844 ORTHO05D004534 8.2e-08 60.1 37 75.7
FAN27G2061 Fragaria x ananassa HOM05D003844 ORTHO05D004534 8.2e-08 60.1 37 75.7
Oeu009862.2 Olea europaea HOM05D003844 ORTHO05D004534 8.2e-08 60.1 37 75.7
FvH4_2g40130 Fragaria vesca HOM05D003844 ORTHO05D004534 1.1e-07 59.7 37 75.7
Lj4C43T11 Lonicera japonica HOM05D003844 ORTHO05D004534 1.1e-07 59.7 42 66.7
MBI16_g28231_MAGBIO Magnolia biondii HOM05D003844 ORTHO05D004534 1.1e-07 59.7 37 81.1
Gorai.002G129600 Gossypium raimondii HOM05D003844 ORTHO05D004534 2.4e-07 58.5 37 81.1
ATR0733G255 Amborella trichopoda HOM05D003844 ORTHO05D004534 4.1e-07 57.8 37 75.7
MSTRG.22297 Avicennia marina HOM05D003844 ORTHO05D004534 4.1e-07 57.8 37 73.0
Aqoxy6G01030 Aquilegia oxysepala HOM05D003844 ORTHO05D004534 2.0e-06 55.5 37 70.3
Sc02g0006420 Simmondsia chinensis HOM05D003844 ORTHO05D004534 2.6e-06 55.1 37 78.4
ClCG08G015280 Citrullus lanatus HOM05D003844 ORTHO05D004534 4.5e-06 54.3 37 70.3
Migut.C00695 Erythranthe guttata HOM05D003844 ORTHO05D004534 4.5e-06 54.3 42 66.7
Eucgr.A00496 Eucalyptus grandis HOM05D003844 ORTHO05D004534 4.5e-06 54.3 37 73.0
GSVIVG01036334001 Vitis vinifera HOM05D003844 ORTHO05D004534 4.5e-06 54.3 37 73.0
Lsat_1_v5_gn_1_18240 Lactuca sativa HOM05D003844 ORTHO05D004534 7.7e-06 53.5 37 78.4
Nn5g29521 Nelumbo nucifera HOM05D003844 ORTHO05D004534 7.7e-06 53.5 37 70.3


User provided reference genes

Program Settings