Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.5e-54 215.3 118 100.0
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.8e-53 211.8 118 99.2
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.2e-40 169.9 112 83.9
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 3.5e-40 168.3 112 83.9
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 1.3e-39 166.4 112 83.0
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 1.7e-39 166.0 112 83.9
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 2.3e-39 165.6 112 80.4
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 2.3e-39 165.6 112 80.4
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.5e-38 162.9 108 84.3
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.5e-38 162.9 108 84.3
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 3.3e-38 161.8 112 80.4
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 5.6e-38 161.0 108 82.4
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 5.6e-38 161.0 111 80.2
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 7.3e-38 160.6 108 82.4
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 7.3e-38 160.6 108 82.4
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 1.6e-37 159.5 110 81.8
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 1.6e-37 159.5 95 90.5
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 2.1e-37 159.1 108 81.5
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 2.1e-37 159.1 112 81.2
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 2.1e-37 159.1 112 81.2
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 2.8e-37 158.7 108 81.5
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 2.8e-37 158.7 102 86.3
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 3.6e-37 158.3 112 80.4
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 6.2e-37 157.5 110 79.1
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 1.1e-36 156.8 108 80.6
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 1.4e-36 156.4 112 77.7
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 2.3e-36 155.6 104 81.7
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 2.3e-36 155.6 104 81.7
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 3.1e-36 155.2 108 81.5
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 3.1e-36 155.2 97 87.6
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 4.0e-36 154.8 110 79.1
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 5.2e-36 154.5 109 79.8
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 5.2e-36 154.5 109 79.8
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 5.2e-36 154.5 113 76.1
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 6.8e-36 154.1 111 77.5
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.2e-35 153.3 113 77.9
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 1.2e-35 153.3 113 77.9
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 1.5e-35 152.9 108 76.9
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 1.5e-35 152.9 114 76.3
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 2.0e-35 152.5 112 76.8
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 3.4e-35 151.8 95 88.4
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 5.8e-35 151.0 108 80.6
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 5.8e-35 151.0 98 81.6
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 7.6e-35 150.6 110 75.5
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 7.6e-35 150.6 110 75.5
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 9.9e-35 150.2 109 77.1
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 1.7e-34 149.4 99 80.8
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 1.7e-34 149.4 101 81.2
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 2.2e-34 149.1 108 77.8
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 2.2e-34 149.1 114 76.3
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 2.9e-34 148.7 108 75.0
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 2.9e-34 148.7 108 76.9
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 2.9e-34 148.7 104 79.8
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 4.9e-34 147.9 95 83.2
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 4.9e-34 147.9 95 84.2
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 4.9e-34 147.9 112 75.0
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 6.4e-34 147.5 101 80.2
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 6.4e-34 147.5 110 76.4
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 6.4e-34 147.5 108 76.9
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 6.4e-34 147.5 99 80.8
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 8.4e-34 147.1 108 72.2
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 8.4e-34 147.1 108 72.2
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 8.4e-34 147.1 93 84.9
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 1.1e-33 146.7 100 79.0
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 1.4e-33 146.4 101 80.2
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 1.4e-33 146.4 112 74.1
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 1.9e-33 146.0 98 78.6
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 1.9e-33 146.0 95 83.2
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 2.4e-33 145.6 103 76.7
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 3.2e-33 145.2 90 86.7
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 3.2e-33 145.2 108 73.1
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 4.1e-33 144.8 108 75.9
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 4.1e-33 144.8 108 75.9
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 4.1e-33 144.8 108 75.9
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 4.1e-33 144.8 112 75.9
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 5.4e-33 144.4 95 82.1
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 5.4e-33 144.4 95 82.1
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 7.1e-33 144.1 101 78.2
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 1.2e-32 143.3 106 76.4
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 3.5e-32 141.7 95 82.1
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 1.7e-31 139.4 108 72.2
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 1.7e-31 139.4 108 72.2
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 3.0e-31 138.7 111 72.1
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 1.1e-30 136.7 95 77.9
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 1.9e-30 136.0 97 75.3
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 3.3e-30 135.2 103 74.8
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 5.6e-30 134.4 93 77.4
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 2.8e-29 132.1 112 63.4
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 4.7e-29 131.3 97 72.2
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 3.4e-27 125.2 111 65.8
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 4.4e-27 124.8 108 70.4
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 1.3e-26 123.2 107 62.6
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 2.9e-26 122.1 110 62.7
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.9e-25 119.4 112 65.2
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 3.2e-25 118.6 108 65.7
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 1.2e-24 116.7 107 64.5
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 2.7e-24 115.5 107 64.5
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 6.0e-24 114.4 95 66.3
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 1.5e-22 109.8 72 81.9
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 1.3e-21 106.7 103 65.0
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 2.0e-19 99.4 67 79.1
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 2.6e-19 99.0 93 65.6
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 1.9e-17 92.8 68 72.1
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-13 79.3 105 39.0
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 3.7e-13 78.6 51 84.3
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 3.1e-12 75.5 102 40.2
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 2.6e-11 72.4 96 45.8
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 9.3e-09 63.9 57 63.2
BcaB01g03316 Brassica carinata HOM05D007302 ORTHO05D009191 3.9e-07 58.5 50 64.0


User provided reference genes

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