Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001505 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 8.2e-55 216.9 113 100.0
CSS0015603 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 1.3e-39 166.4 108 82.4
CSS0016211 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 4.5e-37 157.9 98 87.8
CSS0049977 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 4.5e-37 157.9 99 86.9
CSS0045153 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 1.5e-35 152.9 101 86.1
CSS0040497 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 3.2e-35 151.8 100 87.0
vmacro05819 Vaccinium macrocarpon HOM05D007293 ORTHO05D009143 5.0e-28 127.9 119 65.5
Rhsim10G0022800 Rhododendron simsii HOM05D007293 ORTHO05D009143 6.1e-26 120.9 106 67.0
Dinv35058 Davidia involucrata HOM05D007293 ORTHO05D009143 2.9e-23 112.1 105 62.9
Dinv33495 Davidia involucrata HOM05D007293 ORTHO05D009143 2.4e-22 109.0 105 61.9
MSTRG.24016 Avicennia marina HOM05D007293 ORTHO05D009143 8.6e-20 100.5 102 59.8
Cc07_g02290 Coffea canephora HOM05D007293 ORTHO05D009143 2.8e-18 95.5 104 57.7
Oeu062917.1 Olea europaea HOM05D007293 ORTHO05D009143 3.6e-18 95.1 118 52.5
Migut.H00123 Erythranthe guttata HOM05D007293 ORTHO05D009143 5.2e-17 91.3 107 54.2
GSVIVG01032483001 Vitis vinifera HOM05D007293 ORTHO05D009143 2.6e-16 89.0 105 55.2
Migut.K01369 Erythranthe guttata HOM05D007293 ORTHO05D009143 5.8e-16 87.8 99 60.6
Hma1.2p1_0802F.1_g220360 Hydrangea macrophylla HOM05D007293 ORTHO05D009143 6.4e-15 84.3 106 57.5
Lj7A591G78 Lonicera japonica HOM05D007293 ORTHO05D009143 3.2e-14 82.0 106 54.7
Actinidia06026 Actinidia chinensis HOM05D007293 ORTHO05D009143 2.0e-13 79.3 50 80.0
SalBow1G2453 Salvia bowleyana HOM05D005882 ORTHO05D009143 4.6e-13 78.2 97 55.7
Lsat_1_v5_gn_4_182280 Lactuca sativa HOM05D007293 ORTHO05D009143 1.9e-11 72.8 98 50.0
DCAR_011205 Daucus carota HOM05D007293 ORTHO05D009143 2.5e-11 72.4 104 50.0
ECA246G2262 Erigeron canadensis HOM05D007293 ORTHO05D009143 1.6e-10 69.7 94 50.0
Aqoxy3G02974 Aquilegia oxysepala HOM05D007293 ORTHO05D009143 2.1e-10 69.3 77 58.4
TAR622G0242 Trochodendron aralioides HOM05D007293 ORTHO05D009143 4.7e-10 68.2 106 47.2
HanXRQChr08g0220621 Helianthus annuus HOM05D007293 ORTHO05D009143 6.2e-10 67.8 98 48.0
Atru.chr11.2025 Acer truncatum HOM05D007293 ORTHO05D009143 8.1e-10 67.4 98 48.0
Carub.0002s1704 Capsella rubella HOM05D007293 ORTHO05D009143 1.8e-09 66.2 106 45.3
THA.LOC104822141 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 2.3e-09 65.9 98 45.9
TWI75G0451 Tripterygium wilfordii HOM05D007293 ORTHO05D009143 3.1e-09 65.5 103 46.6
AL2G29660 Arabidopsis lyrata HOM05D007293 ORTHO05D009143 6.8e-09 64.3 106 43.4
AT1G70350 Arabidopsis thaliana HOM05D007293 ORTHO05D009143 8.9e-09 63.9 106 43.4
BolC6t38732H Brassica oleracea HOM05D007293 ORTHO05D009143 8.9e-09 63.9 111 42.3
CARHR063530 Cardamine hirsuta HOM05D007293 ORTHO05D009143 8.9e-09 63.9 106 43.4
C06p36130 Brassica napus HOM05D007293 ORTHO05D009143 1.2e-08 63.5 111 42.3
MD13G1091900 Malus domestica HOM05D007293 ORTHO05D009143 1.5e-08 63.2 98 44.9
PSO063G5020 Papaver somniferum HOM05D007293 ORTHO05D009143 2.0e-08 62.8 108 42.6
THA.LOC104808972 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 2.0e-08 62.8 101 46.5
Sp5g25470 Schrenkiella parvula HOM05D007293 ORTHO05D009143 2.6e-08 62.4 106 42.5
Ciclev10033010m.g Citrus clementina HOM05D007293 ORTHO05D009143 3.4e-08 62.0 98 46.9
Thhalv10019350m.g Eutrema salsugineum HOM05D007293 ORTHO05D009143 3.4e-08 62.0 104 42.3
BcaC08g45820 Brassica carinata HOM05D007293 ORTHO05D009143 9.9e-08 60.5 103 42.7
MD16G1092500 Malus domestica HOM05D007293 ORTHO05D009143 1.3e-07 60.1 100 46.0
EL10Ac6g13673 Beta vulgaris HOM05D007293 ORTHO05D009143 1.7e-07 59.7 77 51.9
RcHm_v2.0_Chr4g0443851 Rosa chinensis HOM05D007293 ORTHO05D009143 1.7e-07 59.7 98 42.9
MBI10_g11075_MAGBIO Magnolia biondii HOM05D007293 ORTHO05D009143 2.2e-07 59.3 51 64.7
AUR62005378 Chenopodium quinoa HOM05D007293 ORTHO05D009143 2.9e-07 58.9 96 43.8
Psat0s2875g0160 Pisum sativum HOM05D007293 ORTHO05D009143 2.9e-07 58.9 104 42.3
Thecc.02G249100 Theobroma cacao HOM05D007293 ORTHO05D009143 2.9e-07 58.9 100 45.0
BcaC03g15179 Brassica carinata HOM05D007293 ORTHO05D009143 6.4e-07 57.8 105 41.9
A02p16490 Brassica napus HOM05D007293 ORTHO05D009143 8.3e-07 57.4 102 45.1
C02p27590 Brassica napus HOM05D007293 ORTHO05D009143 8.3e-07 57.4 102 43.1
BraA02t06707Z Brassica rapa HOM05D007293 ORTHO05D009143 8.3e-07 57.4 102 45.1
BcaB03g15542 Brassica carinata HOM05D007293 ORTHO05D009143 1.1e-06 57.0 105 41.9
Sc04g0009130 Simmondsia chinensis HOM05D007293 ORTHO05D009143 1.1e-06 57.0 72 51.4
AUR62014041 Chenopodium quinoa HOM05D007293 ORTHO05D009143 1.4e-06 56.6 93 41.9
COL.COLO4_36768 Corchorus olitorius HOM05D007293 ORTHO05D009143 1.4e-06 56.6 100 46.0
Nn3g16892 Nelumbo nucifera HOM05D007293 ORTHO05D009143 1.4e-06 56.6 40 70.0
Prupe.5G015600 Prunus persica HOM05D007293 ORTHO05D009143 1.4e-06 56.6 99 41.4
BcaB05g24561 Brassica carinata HOM05D007293 ORTHO05D009143 1.9e-06 56.2 107 41.1
Haze_12178 Corylus avellana HOM05D007293 ORTHO05D009143 2.4e-06 55.8 113 40.7
Psat2g106240 Pisum sativum HOM05D007293 ORTHO05D009143 2.4e-06 55.8 104 40.4
CANSAT01G1482 Cannabis sativa HOM05D007293 ORTHO05D009143 3.2e-06 55.5 103 40.8
Duzib251G0045 Durio zibethinus HOM05D007293 ORTHO05D009143 3.2e-06 55.5 99 44.4
Phvul.002G071600 Phaseolus vulgaris HOM05D007293 ORTHO05D009143 3.2e-06 55.5 99 44.4
RcHm_v2.0_Chr4g0443841 Rosa chinensis HOM05D007293 ORTHO05D009143 5.4e-06 54.7 104 43.3
PSO832G1108 Papaver somniferum HOM05D007293 ORTHO05D009143 7.1e-06 54.3 105 42.9
Hund05995 Selenicereus undatus HOM05D007293 ORTHO05D009143 7.1e-06 54.3 100 43.0
VMungo1215G2593 Vigna mungo HOM05D007293 ORTHO05D009143 7.1e-06 54.3 102 45.1
ClCG08G018060 Citrullus lanatus HOM05D007293 ORTHO05D009143 9.2e-06 53.9 100 44.0


User provided reference genes

Program Settings