Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001500 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 3.5e-166 588.2 294 100.0
Dinv22371 Davidia involucrata HOM05D004279 ORTHO05D004979 2.8e-147 525.4 294 88.8
CSS0022309 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 2.6e-145 518.8 294 90.8
Lj1A851T62 Lonicera japonica HOM05D004279 ORTHO05D004979 2.6e-145 518.8 294 87.8
Dinv08329 Davidia involucrata HOM05D004279 ORTHO05D004979 5.1e-141 504.6 277 90.3
Actinidia35269 Actinidia chinensis HOM05D004279 ORTHO05D004979 3.3e-140 501.9 295 85.1
Rhsim04G0018800 Rhododendron simsii HOM05D004279 ORTHO05D004979 2.4e-138 495.7 295 85.1
Lsat_1_v5_gn_5_7280 Lactuca sativa HOM05D004279 ORTHO05D004979 7.7e-137 490.7 295 83.7
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 3.8e-136 488.4 290 83.4
CSS0025917 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 6.5e-136 487.6 290 83.4
TAR626G0357 Trochodendron aralioides HOM05D004279 ORTHO05D004979 1.1e-135 486.9 294 81.6
HanXRQChr05g0156561 Helianthus annuus HOM05D004279 ORTHO05D004979 7.2e-135 484.2 295 82.7
Nn1g06689 Nelumbo nucifera HOM05D004279 ORTHO05D004979 9.4e-135 483.8 282 84.8
Nn1g03957 Nelumbo nucifera HOM05D004279 ORTHO05D004979 1.4e-133 479.9 294 81.3
PSO210G3340 Papaver somniferum HOM05D004279 ORTHO05D004979 2.0e-132 476.1 296 80.4
Aqoxy4G01310 Aquilegia oxysepala HOM05D004279 ORTHO05D004979 4.4e-132 474.9 296 80.1
PSO832G3402 Papaver somniferum HOM05D004279 ORTHO05D004979 5.7e-132 474.6 296 80.1
DCAR_009977 Daucus carota HOM05D004279 ORTHO05D004979 4.8e-131 471.5 294 81.3
ECA236G3281 Erigeron canadensis HOM05D004279 ORTHO05D004979 4.8e-131 471.5 290 81.4
Hma1.2p1_1143F.1_g261130 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 1.8e-130 469.5 290 80.7
Actinidia18754 Actinidia chinensis HOM05D002936 ORTHO05D004979 2.6e-129 465.7 283 83.0
Peaxi162Scf01111g00012 Petunia axillaris HOM05D004279 ORTHO05D004979 1.7e-128 463.0 295 79.3
HanXRQChr13g0386401 Helianthus annuus HOM05D004279 ORTHO05D004979 1.5e-127 459.9 292 78.4
PGSC0003DMG400019253 Solanum tuberosum HOM05D004279 ORTHO05D004979 1.5e-127 459.9 295 76.6
Nitab4.5_0000815g0050 Nicotiana tabacum HOM05D004279 ORTHO05D004979 1.9e-127 459.5 295 77.6
Cc05_g12550 Coffea canephora HOM05D004279 ORTHO05D004979 2.5e-127 459.1 300 76.3
CSS0045555 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 7.2e-127 457.6 290 80.0
Nitab4.5_0009177g0010 Nicotiana tabacum HOM05D004279 ORTHO05D004979 9.4e-127 457.2 295 77.6
Solyc07g063460.3 Solanum lycopersicum HOM05D004279 ORTHO05D004979 1.2e-126 456.8 295 75.9
Sopen07g031640 Solanum pennellii HOM05D004279 ORTHO05D004979 1.2e-126 456.8 295 75.9
Migut.H01911 Erythranthe guttata HOM05D004279 ORTHO05D004979 2.3e-125 452.6 300 75.7
TWI38G1973 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 2.0e-124 449.5 296 77.0
TAR624G0257 Trochodendron aralioides HOM05D004279 ORTHO05D004979 2.6e-124 449.1 278 80.6
DCAR_022481 Daucus carota HOM05D004279 ORTHO05D004979 1.3e-123 446.8 295 76.3
MSTRG.12925 Avicennia marina HOM05D004279 ORTHO05D004979 1.7e-123 446.4 302 74.5
TWI39G0076 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 2.2e-123 446.0 295 77.6
QL08p019074 Quercus lobata HOM05D004279 ORTHO05D004979 6.3e-123 444.5 295 77.3
MSTRG.14375 Avicennia marina HOM05D004279 ORTHO05D004979 2.4e-122 442.6 302 75.2
CANSAT11G2237 Cannabis sativa HOM05D004279 ORTHO05D004979 7.0e-122 441.0 294 77.2
Cpa.g.sc80.101 Carica papaya HOM05D004279 ORTHO05D004979 4.5e-121 438.3 291 77.3
CiPaw.12G122100 Carya illinoinensis HOM05D004279 ORTHO05D004979 4.5e-121 438.3 293 77.5
ClCG11G018340 Citrullus lanatus HOM05D004279 ORTHO05D004979 7.7e-121 437.6 289 76.1
Oeu055672.1 Olea europaea HOM05D004279 ORTHO05D004979 2.2e-120 436.0 301 72.8
MELO3C018223.2 Cucumis melo HOM05D004279 ORTHO05D004979 8.5e-120 434.1 293 75.4
CsaV3_3G044480 Cucumis sativus L. HOM05D004279 ORTHO05D004979 8.5e-120 434.1 293 75.4
Gohir.D01G054400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 8.5e-120 434.1 291 77.7
Gorai.002G074300 Gossypium raimondii HOM05D004279 ORTHO05D004979 8.5e-120 434.1 291 77.7
Oeu008023.1 Olea europaea HOM05D004279 ORTHO05D004979 1.9e-119 433.0 301 71.4
Gorai.009G432300 Gossypium raimondii HOM05D004279 ORTHO05D004979 2.5e-119 432.6 291 75.9
Potri.001G405200 Populus trichocarpa HOM05D004279 ORTHO05D004979 2.5e-119 432.6 291 75.3
Haze_09505 Corylus avellana HOM05D004279 ORTHO05D004979 4.2e-119 431.8 295 77.3
Cfa020528 Carpinus fangiana HOM05D004279 ORTHO05D004979 7.2e-119 431.0 295 77.3
CiPaw.11G174600 Carya illinoinensis HOM05D004279 ORTHO05D004979 9.4e-119 430.6 291 76.6
Gohir.A01G067200 Gossypium hirsutum HOM05D004279 ORTHO05D004979 9.4e-119 430.6 291 77.3
Gohir.D05G360400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 2.1e-118 429.5 291 75.6
Sabra16G0266200 Salix brachista HOM05D004279 ORTHO05D004979 2.1e-118 429.5 291 74.6
PGR031G2155 Punica granatum HOM05D004279 ORTHO05D004979 3.6e-118 428.7 292 76.4
SalBow7G1458 Salvia bowleyana HOM05D004279 ORTHO05D004979 6.1e-118 427.9 290 73.8
COL.COLO4_09461 Corchorus olitorius HOM05D004279 ORTHO05D004979 8.0e-118 427.6 291 75.9
Duzib268G0928 Durio zibethinus HOM05D004279 ORTHO05D004979 8.0e-118 427.6 291 75.9
SGA_v2.0_scaffold9G04950 Striga asiatica HOM05D004279 ORTHO05D004979 8.0e-118 427.6 300 74.0
RcHm_v2.0_Chr5g0034991 Rosa chinensis HOM05D004279 ORTHO05D004979 1.0e-117 427.2 290 74.8
Manes.15G084500 Manihot esculenta HOM05D004279 ORTHO05D004979 1.4e-117 426.8 297 74.7
FAN16G2997 Fragaria x ananassa HOM05D004279 ORTHO05D004979 1.8e-117 426.4 290 74.8
Duzib213G0014 Durio zibethinus HOM05D004279 ORTHO05D004979 2.3e-117 426.0 291 75.9
FvH4_3g20760 Fragaria vesca HOM05D004279 ORTHO05D004979 2.3e-117 426.0 290 74.8
FAN11G1457 Fragaria x ananassa HOM05D004279 ORTHO05D004979 2.3e-117 426.0 290 74.8
Thecc.07G074500 Theobroma cacao HOM05D004279 ORTHO05D004979 4.0e-117 425.2 291 75.3
Eucgr.F01088 Eucalyptus grandis HOM05D004279 ORTHO05D004979 5.2e-117 424.9 291 75.3
Gohir.A04G027700 Gossypium hirsutum HOM05D004279 ORTHO05D004979 5.2e-117 424.9 291 74.2
FAN21G3274 Fragaria x ananassa HOM05D004279 ORTHO05D004979 6.8e-117 424.5 290 74.5
Ca_01814_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 8.8e-117 424.1 293 75.8
Ca_30536_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 8.8e-117 424.1 293 75.8
Prupe.4G187700 Prunus persica HOM05D004279 ORTHO05D004979 8.8e-117 424.1 285 75.4
TPR.G38955 Trifolium pratense HOM05D004279 ORTHO05D004979 8.8e-117 424.1 293 75.8
Glyma.12G220600 Glycine max HOM05D004279 ORTHO05D004979 1.2e-116 423.7 293 75.1
Manes.03G114800 Manihot esculenta HOM05D004279 ORTHO05D004979 2.0e-116 422.9 297 73.7
Lj3g0025503 Lotus japonicus HOM05D004279 ORTHO05D004979 2.6e-116 422.5 295 74.6
Ciclev10009067m.g Citrus clementina HOM05D004279 ORTHO05D004979 3.4e-116 422.2 286 74.8
FAN25G2565 Fragaria x ananassa HOM05D004279 ORTHO05D004979 7.5e-116 421.0 290 74.1
Sed0000911 Sechium edule HOM05D004279 ORTHO05D004979 1.3e-115 420.2 289 73.7
Psat4g016400 Pisum sativum HOM05D004279 ORTHO05D004979 2.2e-115 419.5 293 75.4
Sed0021920 Sechium edule HOM05D004279 ORTHO05D004979 1.1e-114 417.2 294 73.1
AT5G54400 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 1.8e-114 416.4 292 73.6
Medtr2g080130 Medicago truncatula HOM05D004279 ORTHO05D004979 2.4e-114 416.0 290 75.2
Phvul.005G085300 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 2.4e-114 416.0 293 75.1
VMungo1080G0833 Vigna mungo HOM05D004279 ORTHO05D004979 2.4e-114 416.0 293 75.1
MD03G1221800 Malus domestica HOM05D004279 ORTHO05D004979 3.1e-114 415.6 285 74.4
AL8G29740 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 4.1e-114 415.2 292 73.3
CARHR267680 Cardamine hirsuta HOM05D004279 ORTHO05D004979 5.4e-114 414.8 291 74.2
MBI02_g29384_MAGBIO Magnolia biondii HOM05D004279 ORTHO05D004979 5.4e-114 414.8 291 72.2
MD11G1239200 Malus domestica HOM05D004279 ORTHO05D004979 5.4e-114 414.8 285 72.6
Sc16g0006820 Simmondsia chinensis HOM05D004279 ORTHO05D004979 9.1e-114 414.1 300 71.7
A02p10310 Brassica napus HOM05D004279 ORTHO05D004979 1.2e-113 413.7 292 73.6
Lsat_1_v5_gn_7_105700 Lactuca sativa HOM05D004279 ORTHO05D004979 1.2e-113 413.7 296 73.3
BolC2t07801H Brassica oleracea HOM05D004279 ORTHO05D004979 2.0e-113 412.9 292 73.3
BraA02t06098Z Brassica rapa HOM05D004279 ORTHO05D004979 2.0e-113 412.9 292 73.3
Carub.0008s1473 Capsella rubella HOM05D004279 ORTHO05D004979 2.0e-113 412.9 292 73.3
Potri.011G128300 Populus trichocarpa HOM05D004279 ORTHO05D004979 2.0e-113 412.9 290 71.7
THA.LOC104810491 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 1.0e-112 410.6 291 73.9
unitig_0.g2258 Utricularia gibba HOM05D004279 ORTHO05D004979 1.3e-112 410.2 300 67.7
BcaC09g48518 Brassica carinata HOM05D004279 ORTHO05D004979 1.7e-112 409.8 291 73.2
C02p17040 Brassica napus HOM05D004279 ORTHO05D004979 2.9e-112 409.1 292 73.3
Aa31LG8G2770 Aethionema arabicum HOM05D004279 ORTHO05D004979 3.8e-112 408.7 291 73.2
BolC1t04855H Brassica oleracea HOM05D004279 ORTHO05D004979 3.8e-112 408.7 291 73.2
Sp6g16410 Schrenkiella parvula HOM05D004279 ORTHO05D004979 3.8e-112 408.7 292 72.9
Thhalv10021257m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 5.0e-112 408.3 291 72.9
CARHR090590 Cardamine hirsuta HOM05D004279 ORTHO05D004979 6.5e-112 407.9 291 72.9
Eucgr.F03342 Eucalyptus grandis HOM05D004279 ORTHO05D004979 8.5e-112 407.5 293 71.7
AT3G15530 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 1.5e-111 406.8 291 72.5
Carub.0003s1526 Capsella rubella HOM05D004279 ORTHO05D004979 1.5e-111 406.8 291 72.5
A05p33880 Brassica napus HOM05D004279 ORTHO05D004979 1.9e-111 406.4 291 72.2
Sp3g13790 Schrenkiella parvula HOM05D004279 ORTHO05D004979 1.9e-111 406.4 291 72.2
AL3G28110 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 2.5e-111 406.0 291 72.5
BcaB05g22132 Brassica carinata HOM05D004279 ORTHO05D004979 3.2e-111 405.6 292 72.9
BcaB04g20920 Brassica carinata HOM05D004279 ORTHO05D004979 4.2e-111 405.2 291 72.5
BcaB06g29588 Brassica carinata HOM05D004279 ORTHO05D004979 4.2e-111 405.2 292 71.6
BraA05t22210Z Brassica rapa HOM05D004279 ORTHO05D004979 5.5e-111 404.8 291 72.2
Aa31LG3G10340 Aethionema arabicum HOM05D004279 ORTHO05D004979 7.2e-111 404.4 293 72.4
BcaC05g28964 Brassica carinata HOM05D004279 ORTHO05D004979 1.2e-110 403.7 291 71.5
C05p51590 Brassica napus HOM05D004279 ORTHO05D004979 1.2e-110 403.7 291 71.5
BolC5t33846H Brassica oleracea HOM05D004279 ORTHO05D004979 1.2e-110 403.7 291 71.5
BcaC03g14314 Brassica carinata HOM05D004279 ORTHO05D004979 1.2e-108 397.1 280 73.2
Lalb_Chr25g0286631 Lupinus albus HOM05D004279 ORTHO05D004979 2.0e-108 396.4 290 72.8
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 3.4e-108 395.6 282 73.4
Lalb_Chr01g0016991 Lupinus albus HOM05D004279 ORTHO05D004979 3.4e-108 395.6 296 71.6
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 7.5e-108 394.4 282 73.0
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 1.3e-107 393.7 282 73.0
THA.LOC104799915 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 6.3e-107 391.3 285 73.0
SGA_v2.0_scaffold73G24305 Striga asiatica HOM05D004279 ORTHO05D004979 4.1e-106 388.7 294 66.7
Ah.06g183670 Amaranthus hybridus HOM05D004279 ORTHO05D004979 5.0e-104 381.7 307 65.1
THA.LOC104818054 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 8.6e-104 380.9 291 69.4
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 7.3e-103 377.9 244 77.9
SHI28037 Sapria himalayana HOM05D004279 ORTHO05D004979 7.3e-103 377.9 286 66.4
Glyma.12G148500 Glycine max HOM05D004279 ORTHO05D004979 1.6e-102 376.7 295 68.5
Glyma.06G249400 Glycine max HOM05D004279 ORTHO05D004979 8.0e-102 374.4 296 67.9
Phvul.011G148200 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 2.6e-100 369.4 295 68.1
AUR62015623 Chenopodium quinoa HOM05D004279 ORTHO05D004979 5.7e-100 368.2 306 63.4
EL10Ac4g08091 Beta vulgaris HOM05D004279 ORTHO05D004979 2.9e-99 365.9 310 61.9
AUR62029338 Chenopodium quinoa HOM05D004279 ORTHO05D004979 2.9e-99 365.9 306 63.4
HPP92_016704 Vanilla planifolia HOM05D004279 ORTHO05D004979 3.0e-96 355.9 296 65.2
VMungo1127G1925 Vigna mungo HOM05D004279 ORTHO05D004979 3.0e-96 355.9 295 65.1
SHI18877 Sapria himalayana HOM05D004279 ORTHO05D004979 1.5e-92 343.6 263 66.5
Glyma.13G280900 Glycine max HOM05D004279 ORTHO05D004979 3.4e-92 342.4 293 64.5
GSVIVG01014410001 Vitis vinifera HOM05D004279 ORTHO05D004979 7.8e-89 331.3 193 85.5
SHI27994 Sapria himalayana HOM05D004279 ORTHO05D004979 1.2e-81 307.4 281 57.7
Thhalv10014468m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 3.8e-75 285.8 216 72.7
SHI27891 Sapria himalayana HOM05D004279 ORTHO05D004979 5.1e-72 275.4 271 55.0
SHI27902 Sapria himalayana HOM05D004279 ORTHO05D004979 5.1e-72 275.4 280 53.9
ATR0693G409 Amborella trichopoda HOM05D004279 ORTHO05D004979 8.1e-70 268.1 276 54.0
HanXRQChr08g0235651 Helianthus annuus HOM05D004279 ORTHO05D004979 5.4e-66 255.4 165 75.8
Mapoly0019s0089 Marchantia polymorpha HOM05D004279 ORTHO05D004979 1.3e-64 250.8 281 50.2
SHI28023 Sapria himalayana HOM05D004279 ORTHO05D004979 5.8e-60 235.3 268 51.1
Atru.chr2.2812 Acer truncatum HOM05D004279 ORTHO05D004979 3.5e-57 226.1 136 81.6
CAN.G162.92 Capsicum annuum HOM05D004279 ORTHO05D004979 1.1e-53 214.5 144 73.6
HanXRQChr08g0235661 Helianthus annuus HOM05D004279 ORTHO05D004979 7.6e-52 208.4 133 78.9
VMungo1127G2040 Vigna mungo HOM05D004279 ORTHO05D004979 5.6e-47 192.2 152 65.8
CBR_g24389 Chara braunii HOM05D004279 ORTHO05D004979 1.5e-28 131.0 332 28.9
Atru.chr2.2813 Acer truncatum HOM05D004279 ORTHO05D004979 2.6e-28 130.2 101 67.3
Haze_01531 Corylus avellana HOM05D004279 ORTHO05D004979 5.9e-28 129.0 114 60.5
QL06p019554 Quercus lobata HOM05D004279 ORTHO05D004979 2.5e-26 123.6 87 73.6
Haze_12044 Corylus avellana HOM05D004279 ORTHO05D004979 9.4e-26 121.7 112 59.8
Haze_10444 Corylus avellana HOM05D004279 ORTHO05D004979 1.3e-22 111.3 98 62.2
SHI28022 Sapria himalayana HOM05D004279 ORTHO05D004979 3.7e-14 83.2 71 57.7
Haze_13283 Corylus avellana HOM05D004279 ORTHO05D004979 1.8e-13 80.9 86 57.0
Haze_06332 Corylus avellana HOM05D004279 ORTHO05D004979 2.4e-13 80.5 72 58.3
SHI26932 Sapria himalayana HOM05D009124 ORTHO05D012381 2.6e-07 60.5 69 47.8
CDE02G4569 Ceratophyllum demersum HOM05D005748 ORTHO05D007123 6.3e-06 55.8 130 32.3


User provided reference genes

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