Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001491 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 4.3e-245 850.9 437 100.0
CSS0020841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 4.7e-106 389.0 439 51.5
CSS0047841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 3.7e-103 379.4 411 53.0
CSS0021702 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.8e-102 377.1 426 52.1
CSS0026316 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 4.1e-102 375.9 396 53.3
CSS0023562 Camellia sinensis var. sinensis HOM05D000557 ORTHO05D011057 3.0e-36 157.1 194 46.4
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.2e-24 118.6 194 32.5
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 9.3e-22 109.0 263 30.4
CSS0043342 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 6.1e-21 106.3 186 31.7
CSS0010468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D011057 4.5e-16 90.1 207 32.4
vmacro16299 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 5.9e-16 89.7 212 31.1
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 2.2e-15 87.8 284 24.6
CSS0006937 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.2e-15 87.8 88 44.3
vmacro22723 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 6.5e-15 86.3 257 25.3
CSS0018658 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 8.5e-15 85.9 146 37.7
CSS0021891 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 9.4e-14 82.4 88 43.2
CSS0049061 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 9.4e-14 82.4 88 43.2
vmacro05509 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 2.1e-13 81.3 274 24.5
CSS0016458 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 4.6e-13 80.1 136 36.0
vmacro09750 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 1.4e-12 78.6 194 27.8
CSS0020104 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 3.9e-12 77.0 210 26.2
CSS0017101 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 8.8e-12 75.9 104 43.3
CSS0029903 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.5e-11 75.1 123 39.8
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 2.5e-11 74.3 197 25.9
CSS0000959 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.3e-11 73.9 53 64.2
CSS0047350 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.3e-11 73.9 51 66.7
CSS0042344 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 5.7e-11 73.2 132 37.9
Actinidia04023 Actinidia chinensis HOM05D012898 ORTHO05D011057 2.2e-10 71.2 269 26.8
CSS0025679 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.1e-09 68.9 51 60.8
Rhsim05G0024200 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.1e-09 67.4 199 26.6
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 1.5e-08 65.1 184 26.1
vmacro09252 Vaccinium macrocarpon HOM05D008219 ORTHO05D000487 2.2e-07 61.2 174 30.5
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.0e-07 60.1 457 18.6
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 2.5e-06 57.8 284 21.8
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.5e-06 56.6 458 18.8
Actinidia24024 Actinidia chinensis HOM05D023450 ORTHO05D023249 7.2e-06 56.2 53 52.8
CSS0044383 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 9.4e-06 55.8 186 25.8
vmacro10960 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 9.4e-06 55.8 50 50.0
vmacro12730 Vaccinium macrocarpon HOM05D002015 ORTHO05D011057 9.4e-06 55.8 60 48.3


User provided reference genes

Program Settings