Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001488 Camellia sinensis var. sinensis HOM05D009283 ORTHO05D011386 4.8e-38 160.6 78 100.0
CSS0042268 Camellia sinensis var. sinensis HOM05D009283 ORTHO05D011386 1.8e-21 105.5 70 75.7
vmacro14601 Vaccinium macrocarpon HOM05D009283 ORTHO05D011386 2.1e-17 92.0 80 60.0
QL01p038697 Quercus lobata HOM05D009283 ORTHO05D011386 3.9e-11 71.2 73 61.6
Nn2g10874 Nelumbo nucifera HOM05D028224 ORTHO05D011386 2.5e-10 68.6 81 49.4
GSVIVG01024721001 Vitis vinifera HOM05D028224 ORTHO05D011386 4.3e-10 67.8 75 49.3
TAR636G0553 Trochodendron aralioides HOM05D009283 ORTHO05D011386 5.6e-10 67.4 83 50.6
Potri.001G277600 Populus trichocarpa HOM05D009283 ORTHO05D011386 7.3e-10 67.0 77 49.4
Potri.009G072201 Populus trichocarpa HOM05D009283 ORTHO05D011386 9.5e-10 66.6 74 51.4
MD11G1071800 Malus domestica HOM05D009283 ORTHO05D011386 3.6e-09 64.7 73 49.3
DCAR_007370 Daucus carota HOM05D009283 ORTHO05D011386 3.1e-08 61.6 76 48.7
Gohir.D09G089500 Gossypium hirsutum HOM05D009283 ORTHO05D011386 3.1e-08 61.6 70 45.7
Gorai.006G105700 Gossypium raimondii HOM05D009283 ORTHO05D011386 3.1e-08 61.6 70 45.7
Duzib150G0426 Durio zibethinus HOM05D009283 ORTHO05D011386 4.0e-08 61.2 81 45.7
MD03G1067000 Malus domestica HOM05D009283 ORTHO05D011386 4.0e-08 61.2 74 50.0
Sabra16G0171600 Salix brachista HOM05D009283 ORTHO05D011386 5.2e-08 60.8 71 50.7
Gohir.A09G089400 Gossypium hirsutum HOM05D009283 ORTHO05D011386 1.2e-07 59.7 70 44.3
Manes.01G160300 Manihot esculenta HOM05D009283 ORTHO05D011386 5.8e-07 57.4 72 45.8
Nn2g13153 Nelumbo nucifera HOM05D028224 ORTHO05D011386 5.8e-07 57.4 75 48.0
Duzib168G1848 Durio zibethinus HOM05D009283 ORTHO05D011386 1.3e-06 56.2 76 50.0
Oeu029168.1 Olea europaea HOM05D009283 ORTHO05D011386 1.3e-06 56.2 68 50.0
Prupe.6G055500 Prunus persica HOM05D009283 ORTHO05D011386 2.2e-06 55.5 75 45.3
AT1G07175 Arabidopsis thaliana HOM05D009317 ORTHO05D011493 6.4e-06 53.9 71 50.7
THA.LOC109116766 Tarenaya hassleriana HOM05D009317 ORTHO05D011493 8.3e-06 53.5 67 50.7


User provided reference genes

Program Settings