Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001478 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 3.3e-83 311.6 152 100.0
CSS0022990 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 4.1e-65 251.5 152 83.6
CSS0019124 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 2.2e-63 245.7 152 80.9
CSS0006524 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 3.6e-53 211.8 156 72.4
CSS0007484 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 3.6e-53 211.8 156 72.4
CSS0045262 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 3.3e-51 205.3 156 71.2
CSS0012670 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.6e-45 186.4 156 65.4
Dinv20729 Davidia involucrata HOM05D000092 ORTHO05D000042 1.5e-19 100.1 181 39.8
Dinv20556 Davidia involucrata HOM05D000092 ORTHO05D000042 1.3e-18 97.1 179 39.1
Dinv20740 Davidia involucrata HOM05D000092 ORTHO05D000042 1.3e-18 97.1 179 39.1
CSS0029815 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 2.0e-16 89.7 176 36.4
CSS0037245 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 3.8e-15 85.5 179 35.8
CSS0050384 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 6.6e-15 84.7 176 35.2
Dinv03237 Davidia involucrata HOM05D000092 ORTHO05D000042 2.5e-14 82.8 195 35.9
Dinv03245 Davidia involucrata HOM05D000092 ORTHO05D000042 2.5e-14 82.8 196 35.7
CSS0035635 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 9.5e-14 80.9 162 40.1
Dinv03240 Davidia involucrata HOM05D000092 ORTHO05D000042 1.0e-12 77.4 188 34.6
CSS0024218 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 5.2e-12 75.1 174 35.6
Rhsim03G0020800 Rhododendron simsii HOM05D000092 ORTHO05D000042 5.2e-12 75.1 175 33.1
Actinidia20282 Actinidia chinensis HOM05D000092 ORTHO05D000042 1.5e-11 73.6 173 32.4
Rhsim06G0161900 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.5e-11 73.6 144 36.1
Dinv03242 Davidia involucrata HOM05D000092 ORTHO05D000042 2.0e-11 73.2 182 33.5
Dinv18880 Davidia involucrata HOM05D000092 ORTHO05D000042 3.4e-11 72.4 146 38.4
Rhsim06G0161400 Rhododendron simsii HOM05D000092 ORTHO05D000042 9.8e-11 70.9 97 43.3
CSS0009386 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.7e-10 70.1 149 36.2
Actinidia16423 Actinidia chinensis HOM05D000092 ORTHO05D000042 2.2e-10 69.7 171 32.2
Rhsim03G0016800 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.7e-10 68.9 140 34.3
Rhsim05G0217600 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.7e-10 68.9 97 41.2
Rhsim05G0218900 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.7e-10 68.9 97 43.3
Rhsim03G0023800 Rhododendron simsii HOM05D000092 ORTHO05D000042 6.4e-10 68.2 179 29.6
Rhsim06G0161600 Rhododendron simsii HOM05D000092 ORTHO05D000042 8.3e-10 67.8 142 33.8
Rhsim05G0218300 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.8e-09 66.6 170 28.8
Rhsim03G0015900 Rhododendron simsii HOM05D000997 ORTHO05D000828 4.1e-09 65.5 177 31.6
CSS0006875 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 5.4e-09 65.1 146 32.9
RhsimUnG0228200 Rhododendron simsii HOM05D000092 ORTHO05D021096 7.0e-09 64.7 138 32.6
Rhsim02G0094600 Rhododendron simsii HOM05D000092 ORTHO05D000042 9.2e-09 64.3 151 35.1
Dinv05244 Davidia involucrata HOM05D000092 ORTHO05D000042 1.6e-08 63.5 140 37.1
Rhsim05G0218700 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.0e-08 63.2 173 31.8
Actinidia36927 Actinidia chinensis HOM05D000092 ORTHO05D000042 2.7e-08 62.8 173 31.2
Rhsim03G0035100 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.7e-08 62.8 179 30.2
Rhsim06G0161800 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.5e-08 62.4 97 38.1
Dinv05255 Davidia involucrata HOM05D000092 ORTHO05D000042 4.6e-08 62.0 146 34.9
Dinv20558 Davidia involucrata HOM05D000092 ORTHO05D000042 4.6e-08 62.0 196 30.6
Dinv20738 Davidia involucrata HOM05D000092 ORTHO05D000042 4.6e-08 62.0 196 30.6
RhsimUnG0106800 Rhododendron simsii HOM05D000092 ORTHO05D000042 5.9e-08 61.6 213 29.1
vmacro12194 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 1.0e-07 60.8 151 31.8
Rhsim02G0094400 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.7e-07 60.1 148 35.1
CSS0034659 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 5.0e-07 58.5 142 33.1
CSS0020621 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 8.6e-07 57.8 139 32.4
Dinv03248 Davidia involucrata HOM05D000092 ORTHO05D000042 8.6e-07 57.8 90 42.2
Rhsim02G0093800 Rhododendron simsii HOM05D000092 ORTHO05D000042 8.6e-07 57.8 150 34.7
RhsimUnG0106500 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.1e-06 57.4 97 38.1
Thecc.05G202900 Theobroma cacao HOM05D000092 ORTHO05D000042 1.9e-06 56.6 151 29.8
vmacro07866 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 1.9e-06 56.6 149 26.8
vmacro09387 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 1.9e-06 56.6 151 31.8
Rhsim03G0017300 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.5e-06 56.2 136 32.4
Rhsim03G0012300 Rhododendron simsii HOM05D000228 ORTHO05D005112 3.3e-06 55.8 124 32.3
vmacro23451 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 5.6e-06 55.1 125 28.8
Rhsim12G0031200 Rhododendron simsii HOM05D000092 ORTHO05D000042 7.3e-06 54.7 138 31.9


User provided reference genes

Program Settings