Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001446 Camellia sinensis var. sinensis HOM05D020756 ORTHO05D010072 1.6e-43 179.9 166 100.0
Rhsim03G0068200 Rhododendron simsii HOM05D008698 ORTHO05D010072 1.7e-24 116.7 188 73.4
vmacro21117 Vaccinium macrocarpon HOM05D008698 ORTHO05D010072 7.9e-22 107.8 188 72.3
CSS0045987 Camellia sinensis var. sinensis HOM05D020756 ORTHO05D010072 1.1e-18 97.4 168 70.8
Actinidia21589 Actinidia chinensis HOM05D005695 ORTHO05D007810 1.2e-17 94.0 190 66.8
Dinv43522 Davidia involucrata HOM05D008698 ORTHO05D010072 1.0e-16 90.9 172 70.3
Actinidia20018 Actinidia chinensis HOM05D020756 ORTHO05D010072 1.3e-16 90.5 177 61.6
CSS0003420 Camellia sinensis var. sinensis HOM05D020756 ORTHO05D010072 1.3e-16 90.5 174 64.4
CSS0030609 Camellia sinensis var. sinensis HOM05D020756 ORTHO05D010072 5.1e-13 78.6 177 67.2
Dinv43963 Davidia involucrata HOM05D008698 ORTHO05D010072 6.7e-13 78.2 200 67.0
Thecc.05G234300 Theobroma cacao HOM05D008698 ORTHO05D010072 8.8e-13 77.8 185 65.9
CSS0014103 Camellia sinensis var. sinensis HOM05D020756 ORTHO05D010072 2.5e-12 76.3 181 65.7
PGR083G1635 Punica granatum HOM05D008698 ORTHO05D010072 1.7e-11 73.6 181 60.2
Potri.013G070900 Populus trichocarpa HOM05D008698 ORTHO05D010072 1.0e-08 64.3 138 62.3
Cc05_g03920 Coffea canephora HOM05D008698 ORTHO05D010072 3.8e-08 62.4 126 68.3
Actinidia01252 Actinidia chinensis HOM05D016621 ORTHO05D010071 6.5e-08 61.6 188 55.9
Hma1.2p1_0353F.1_g133170 Hydrangea macrophylla HOM05D008698 ORTHO05D010072 8.5e-08 61.2 207 51.2
GSVIVG01019304001 Vitis vinifera HOM05D008698 ORTHO05D010072 1.1e-07 60.8 194 56.2
Prupe.2G106300 Prunus persica HOM05D008698 ORTHO05D010072 1.9e-07 60.1 201 52.2
Eucgr.D01072 Eucalyptus grandis HOM05D008698 ORTHO05D010072 3.2e-07 59.3 74 67.6
ClCG05G002490 Citrullus lanatus HOM05D023437 ORTHO05D010072 5.5e-07 58.5 178 54.5
Duzib128G0528 Durio zibethinus HOM05D008698 ORTHO05D010072 5.5e-07 58.5 209 56.9
Eucgr.L01353 Eucalyptus grandis HOM05D008698 ORTHO05D010072 5.5e-07 58.5 74 66.2
Prupe.2G106400 Prunus persica HOM05D020274 ORTHO05D021066 5.5e-07 58.5 169 42.6
Actinidia31735 Actinidia chinensis HOM05D008698 ORTHO05D010072 7.2e-07 58.2 192 59.4
Nn1g09349 Nelumbo nucifera HOM05D016621 ORTHO05D010071 7.2e-07 58.2 176 55.7
Hma1.2p1_0353F.1_g133180 Hydrangea macrophylla HOM05D008698 ORTHO05D010072 1.2e-06 57.4 143 49.7
TAR375G0911 Trochodendron aralioides HOM05D008698 ORTHO05D010072 2.1e-06 56.6 153 67.3
Actinidia28456 Actinidia chinensis HOM05D005695 ORTHO05D010072 2.7e-06 56.2 33 75.8
Sed0010525 Sechium edule HOM05D023437 ORTHO05D010072 4.7e-06 55.5 64 57.8


User provided reference genes

Program Settings