Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001388 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 1.3e-34 149.4 89 100.0
CSS0033446 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 2.7e-16 88.6 54 83.3
Lsat_1_v5_gn_7_112301 Lactuca sativa HOM05D007991 ORTHO05D010158 7.7e-16 87.0 59 76.3
Atru.chr8.1056 Acer truncatum HOM05D007991 ORTHO05D010158 1.3e-15 86.3 70 68.6
Medtr2g069650 Medicago truncatula HOM05D007991 ORTHO05D010158 2.9e-15 85.1 78 64.1
Manes.06G170901 Manihot esculenta HOM05D007991 ORTHO05D010158 3.8e-15 84.7 73 65.8
Manes.06G170500 Manihot esculenta HOM05D007991 ORTHO05D010158 1.1e-14 83.2 73 64.4
Ciclev10023629m.g Citrus clementina HOM05D007991 ORTHO05D010158 1.9e-14 82.4 71 63.4
Cpa.g.sc10.36 Carica papaya HOM05D007991 ORTHO05D010158 2.5e-14 82.0 67 68.7
Lalb_Chr19g0133391 Lupinus albus HOM05D007991 ORTHO05D010158 3.3e-14 81.6 70 62.9
GSVIVG01035227001 Vitis vinifera HOM05D007991 ORTHO05D010158 4.2e-14 81.3 72 63.9
TWI39G0184 Tripterygium wilfordii HOM05D007991 ORTHO05D010158 5.5e-14 80.9 67 65.7
Nn7g37867 Nelumbo nucifera HOM05D007991 ORTHO05D010158 7.2e-14 80.5 73 61.6
GSVIVG01012568001 Vitis vinifera HOM05D007991 ORTHO05D010158 7.2e-14 80.5 54 77.8
CsaV3_4G031820 Cucumis sativus L. HOM05D005971 ORTHO05D007459 1.2e-13 79.7 54 75.9
Peaxi162Scf00452g00812 Petunia axillaris HOM05D007991 ORTHO05D010158 1.2e-13 79.7 56 69.6
Ca_03685_v3 Cicer arietinum L. HOM05D007991 ORTHO05D010158 2.1e-13 79.0 70 70.0
COL.COLO4_28875 Corchorus olitorius HOM05D007991 ORTHO05D010158 2.1e-13 79.0 77 55.8
TPR.G9765 Trifolium pratense HOM05D007991 ORTHO05D010158 2.8e-13 78.6 79 59.5
Ah.07g206310 Amaranthus hybridus HOM05D007991 ORTHO05D010158 6.1e-13 77.4 69 56.5
ECA236G0423 Erigeron canadensis HOM05D007991 ORTHO05D010158 6.1e-13 77.4 58 69.0
Prupe.4G140900 Prunus persica HOM05D007991 ORTHO05D010158 6.1e-13 77.4 53 71.7
Solyc07g066400.1 Solanum lycopersicum HOM05D007991 ORTHO05D010158 6.1e-13 77.4 56 69.6
ClCG11G016360 Citrullus lanatus HOM05D007991 ORTHO05D010158 8.0e-13 77.0 54 74.1
ClCG11G016370 Citrullus lanatus HOM05D007991 ORTHO05D010158 8.0e-13 77.0 54 74.1
MELO3C010561.2 Cucumis melo HOM05D007991 ORTHO05D010158 1.0e-12 76.6 54 72.2
QL04p074011 Quercus lobata HOM05D007991 ORTHO05D010158 1.0e-12 76.6 73 57.5
PGSC0003DMG400022239 Solanum tuberosum HOM05D007991 ORTHO05D010158 1.0e-12 76.6 56 69.6
Aqoxy6G00820 Aquilegia oxysepala HOM05D007991 ORTHO05D010158 1.4e-12 76.3 75 56.0
CAN.G943.33 Capsicum annuum HOM05D007991 ORTHO05D010158 1.4e-12 76.3 56 66.1
HanXRQChr11g0334671 Helianthus annuus HOM05D007991 ORTHO05D010158 1.4e-12 76.3 58 67.2
EL10Ac4g08566 Beta vulgaris HOM05D007991 ORTHO05D010158 3.0e-12 75.1 63 60.3
Glyma.08G172800 Glycine max HOM05D007991 ORTHO05D010158 3.0e-12 75.1 80 55.0
Sc16g0005380 Simmondsia chinensis HOM05D007991 ORTHO05D010158 3.0e-12 75.1 67 59.7
Sopen07g034570 Solanum pennellii HOM05D007991 ORTHO05D010158 3.0e-12 75.1 56 69.6
FAN11G2864 Fragaria x ananassa HOM05D007991 ORTHO05D010158 4.0e-12 74.7 89 50.6
FAN21G1902 Fragaria x ananassa HOM05D007991 ORTHO05D010158 4.0e-12 74.7 89 50.6
Psat1g011440 Pisum sativum HOM05D007991 ORTHO05D010158 5.2e-12 74.3 58 65.5
PGR042G3415 Punica granatum HOM05D007991 ORTHO05D010158 5.2e-12 74.3 59 64.4
BcaB04g21024 Brassica carinata HOM05D007991 ORTHO05D010158 6.8e-12 73.9 72 58.3
BcaC09g48284 Brassica carinata HOM05D007991 ORTHO05D010158 6.8e-12 73.9 72 55.6
C01p52180 Brassica napus HOM05D007991 ORTHO05D010158 6.8e-12 73.9 72 55.6
BolC1t05158H Brassica oleracea HOM05D007991 ORTHO05D010158 6.8e-12 73.9 72 55.6
BraA01t04089Z Brassica rapa HOM05D007991 ORTHO05D010158 6.8e-12 73.9 80 51.2
FAN16G1552 Fragaria x ananassa HOM05D007991 ORTHO05D010158 6.8e-12 73.9 71 56.3
Aa31LG8G190 Aethionema arabicum HOM05D007991 ORTHO05D010158 8.9e-12 73.6 72 55.6
Gorai.007G003200 Gossypium raimondii HOM05D007991 ORTHO05D010158 8.9e-12 73.6 53 69.8
Gohir.A11G002600 Gossypium hirsutum HOM05D007991 ORTHO05D010158 1.2e-11 73.2 53 69.8
MBI02_g12653_MAGBIO Magnolia biondii HOM05D007991 ORTHO05D010158 1.5e-11 72.8 69 56.5
FAN25G2658 Fragaria x ananassa HOM05D007991 ORTHO05D010158 2.6e-11 72.0 71 54.9
Lalb_Chr03g0031611 Lupinus albus HOM05D007991 ORTHO05D010158 2.6e-11 72.0 53 66.0
RcHm_v2.0_Chr5g0026701 Rosa chinensis HOM05D007991 ORTHO05D010158 2.6e-11 72.0 78 53.8
unitig_8.g4768 Utricularia gibba HOM05D007991 ORTHO05D010158 5.7e-11 70.9 58 67.2
Gohir.D11G002200 Gossypium hirsutum HOM05D007991 ORTHO05D010158 7.5e-11 70.5 53 67.9
Sp3g11110 Schrenkiella parvula HOM05D007991 ORTHO05D010158 7.5e-11 70.5 72 54.2
COL.COLO4_04148 Corchorus olitorius HOM05D007991 ORTHO05D010158 9.8e-11 70.1 54 64.8
AT3G12960 Arabidopsis thaliana HOM05D007991 ORTHO05D010158 1.3e-10 69.7 69 56.5
Phvul.005G056100 Phaseolus vulgaris HOM05D007991 ORTHO05D010158 1.3e-10 69.7 54 63.0
Lj3g0014492 Lotus japonicus HOM05D007991 ORTHO05D010158 1.7e-10 69.3 66 57.6
Sed0025657 Sechium edule HOM05D007991 ORTHO05D010158 2.2e-10 68.9 65 60.0
Duzib205G1447 Durio zibethinus HOM05D007991 ORTHO05D010158 2.8e-10 68.6 70 54.3
SalBow2G0434 Salvia bowleyana HOM05D007991 ORTHO05D010158 2.8e-10 68.6 56 66.1
AL3G24640 Arabidopsis lyrata HOM05D007991 ORTHO05D010158 6.3e-10 67.4 53 64.2
CiPaw.04G012700 Carya illinoinensis HOM05D007991 ORTHO05D010158 6.3e-10 67.4 54 61.1
MD05G1219200 Malus domestica HOM05D007991 ORTHO05D010158 8.3e-10 67.0 64 54.7
PSO675G0275 Papaver somniferum HOM05D007991 ORTHO05D010158 8.3e-10 67.0 73 49.3
Cfa019429 Carpinus fangiana HOM05D007991 ORTHO05D010158 1.4e-09 66.2 50 66.0
Carub.0003s1230 Capsella rubella HOM05D007991 ORTHO05D010158 2.4e-09 65.5 62 56.5
CANSAT80G1088 Cannabis sativa HOM05D007991 ORTHO05D010158 4.1e-09 64.7 65 58.5
Thhalv10022193m.g Eutrema salsugineum HOM05D007991 ORTHO05D010158 5.4e-09 64.3 71 52.1
CARHR087490 Cardamine hirsuta HOM05D007991 ORTHO05D010158 1.6e-08 62.8 69 53.6
Nn4g23994 Nelumbo nucifera HOM05D007991 ORTHO05D010158 2.0e-08 62.4 72 52.8
Nitab4.5_0008437g0010 Nicotiana tabacum HOM05D007991 ORTHO05D010158 2.0e-08 62.4 65 56.9
Os08g0104400 Oryza sativa ssp. japonica HOM05D007991 ORTHO05D010158 8.6e-07 57.0 54 53.7


User provided reference genes

Program Settings