Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001379 Camellia sinensis var. sinensis HOM05D004845 ORTHO05D005957 0.0e+00 1521.5 849 100.0
Actinidia32134 Actinidia chinensis HOM05D004845 ORTHO05D005957 9.0e-271 937.2 848 69.3
Rhsim08G0231600 Rhododendron simsii HOM05D004845 ORTHO05D005957 1.8e-250 869.8 854 67.2
vmacro18819 Vaccinium macrocarpon HOM05D004845 ORTHO05D005957 6.5e-237 824.7 853 64.8
Dinv30397 Davidia involucrata HOM05D004845 ORTHO05D005957 2.5e-236 822.8 821 66.5
Dinv37932 Davidia involucrata HOM05D004845 ORTHO05D005957 1.4e-223 780.4 852 63.6
Actinidia21742 Actinidia chinensis HOM05D004845 ORTHO05D005957 3.0e-202 709.5 840 52.6
QL05p015844 Quercus lobata HOM05D004845 ORTHO05D005957 2.0e-198 696.8 865 57.2
Cfa003605 Carpinus fangiana HOM05D004845 ORTHO05D005957 3.5e-190 669.5 856 57.0
Prupe.3G052500 Prunus persica HOM05D004845 ORTHO05D005957 6.4e-184 648.7 860 55.9
Atru.chr1.3636 Acer truncatum HOM05D004845 ORTHO05D005957 1.8e-178 630.6 874 54.7
TAR629G3185 Trochodendron aralioides HOM05D004845 ORTHO05D005957 1.1e-170 604.7 882 53.7
CiPaw.02G142000 Carya illinoinensis HOM05D004845 ORTHO05D005957 6.8e-170 602.1 861 54.2
MD09G1196000 Malus domestica HOM05D004845 ORTHO05D005957 3.4e-169 599.7 854 52.7
RcHm_v2.0_Chr2g0142521 Rosa chinensis HOM05D004845 ORTHO05D005957 1.2e-166 591.3 857 52.2
Thecc.06G108000 Theobroma cacao HOM05D004845 ORTHO05D005957 3.5e-166 589.7 875 51.7
Manes.04G137600 Manihot esculenta HOM05D004845 ORTHO05D005957 4.6e-166 589.3 846 54.1
FAN05G2503 Fragaria x ananassa HOM05D004845 ORTHO05D005957 6.0e-166 589.0 857 50.9
FvH4_6g32970 Fragaria vesca HOM05D004845 ORTHO05D005957 3.0e-165 586.6 859 51.3
FAN02G0586 Fragaria x ananassa HOM05D004845 ORTHO05D005957 3.0e-165 586.6 858 51.5
Duzib160G0801 Durio zibethinus HOM05D004845 ORTHO05D005957 6.6e-165 585.5 864 50.9
FAN14G1946 Fragaria x ananassa HOM05D004845 ORTHO05D005957 1.6e-163 580.9 859 51.2
FAN09G4600 Fragaria x ananassa HOM05D004845 ORTHO05D005957 4.9e-160 569.3 858 50.9
Manes.11G028800 Manihot esculenta HOM05D004845 ORTHO05D005957 4.9e-152 542.7 851 51.0
Potri.003G033100 Populus trichocarpa HOM05D004845 ORTHO05D005957 2.1e-150 537.3 866 49.4
Ciclev10024729m.g Citrus clementina HOM05D004845 ORTHO05D005957 1.3e-149 534.6 892 49.9
Gohir.A05G133700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 1.9e-148 530.8 873 49.7
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea HOM05D004845 ORTHO05D005957 1.1e-146 525.0 865 49.4
COL.COLO4_30609 Corchorus olitorius HOM05D004845 ORTHO05D005957 1.8e-146 524.2 721 47.9
Nn1g08771 Nelumbo nucifera HOM05D004845 ORTHO05D005957 3.1e-146 523.5 858 50.7
CANSAT56G3316 Cannabis sativa HOM05D004845 ORTHO05D005957 4.0e-146 523.1 869 50.6
Cpa.g.sc131.35 Carica papaya HOM05D004845 ORTHO05D005957 9.0e-146 521.9 911 48.8
Sabra03G0019000 Salix brachista HOM05D004845 ORTHO05D005957 9.9e-145 518.5 845 49.8
Gohir.D05G135700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 1.3e-144 518.1 875 49.1
arahy.Tifrunner.gnm1.ann1.7F0ZFP Arachis hypogaea HOM05D004845 ORTHO05D005957 1.7e-144 517.7 865 48.7
Gorai.009G139700 Gossypium raimondii HOM05D004845 ORTHO05D005957 3.8e-144 516.5 873 49.7
Duzib235G0635 Durio zibethinus HOM05D004845 ORTHO05D005957 2.4e-143 513.8 855 48.7
Cc04_g02180 Coffea canephora HOM05D004845 ORTHO05D005957 6.0e-142 509.2 855 49.2
Oeu052809.1 Olea europaea HOM05D004845 ORTHO05D005957 1.1e-140 505.0 845 48.0
Glyma.08G196100 Glycine max HOM05D004845 ORTHO05D005957 1.7e-136 491.1 850 48.2
MD17G1176700 Malus domestica HOM05D004845 ORTHO05D005957 8.4e-136 488.8 858 47.4
MELO3C013040.2 Cucumis melo HOM05D004845 ORTHO05D005957 2.5e-135 487.3 855 48.2
GSVIVG01016889001 Vitis vinifera HOM05D004845 ORTHO05D005957 4.2e-135 486.5 855 43.3
Glyma.07G012400 Glycine max HOM05D004845 ORTHO05D005957 2.7e-134 483.8 851 47.6
MSTRG.22604 Avicennia marina HOM05D004845 ORTHO05D005957 1.3e-133 481.5 856 48.1
Sed0014548 Sechium edule HOM05D004845 ORTHO05D005957 5.7e-132 476.1 854 47.4
ClCG07G013620 Citrullus lanatus HOM05D004845 ORTHO05D005957 2.4e-130 470.7 855 48.1
Haze_15920 Corylus avellana HOM05D004845 ORTHO05D005957 2.4e-130 470.7 603 51.1
Medtr8g015620 Medicago truncatula HOM05D004845 ORTHO05D005957 1.0e-128 465.3 864 44.7
Peaxi162Scf00038g01322 Petunia axillaris HOM05D004845 ORTHO05D005957 2.2e-128 464.2 848 46.5
DCAR_026375 Daucus carota HOM05D004845 ORTHO05D005957 5.0e-128 463.0 854 46.1
Ca_23299_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 2.7e-126 457.2 865 44.5
Lj5C49T6 Lonicera japonica HOM05D004845 ORTHO05D005957 4.6e-126 456.4 836 42.3
Psat4g193760 Pisum sativum HOM05D004845 ORTHO05D005957 4.6e-126 456.4 851 44.4
CsaV3_3G044010 Cucumis sativus L. HOM05D004845 ORTHO05D005957 1.3e-125 454.9 856 47.3
Migut.I01002 Erythranthe guttata HOM05D004845 ORTHO05D005957 1.3e-123 448.4 865 46.7
Sed0023831 Sechium edule HOM05D004845 ORTHO05D005957 1.4e-122 444.9 853 46.9
CAN.G1668.10 Capsicum annuum HOM05D004845 ORTHO05D005957 5.0e-120 436.4 855 45.6
Lj3g0006882 Lotus japonicus HOM05D004845 ORTHO05D005957 1.1e-119 435.3 866 44.3
Eucgr.J02886 Eucalyptus grandis HOM05D004845 ORTHO05D005957 2.7e-118 430.6 855 46.0
Sopen03g040190 Solanum pennellii HOM05D004845 ORTHO05D005957 1.8e-117 427.9 854 44.4
Lalb_Chr04g0263091 Lupinus albus HOM05D004845 ORTHO05D005957 1.1e-114 418.7 851 43.9
Solyc03g121380.3 Solanum lycopersicum HOM05D004845 ORTHO05D005957 2.4e-114 417.5 854 43.9
MBI01_g37799_MAGBIO Magnolia biondii HOM05D004845 ORTHO05D005957 3.1e-114 417.2 761 41.7
TWI31G1049 Tripterygium wilfordii HOM05D004845 ORTHO05D005957 4.2e-111 406.8 878 44.4
Phvul.010G141800 Phaseolus vulgaris HOM05D004845 ORTHO05D005957 9.4e-111 405.6 852 43.4
Lj3g0020048 Lotus japonicus HOM05D004845 ORTHO05D005957 1.1e-108 398.7 858 42.8
VMungo0331G0639 Vigna mungo HOM05D004845 ORTHO05D005957 9.1e-106 389.0 852 42.7
PSO170G6909 Papaver somniferum HOM05D004845 ORTHO05D005957 2.1e-102 377.9 827 45.0
Hund07666 Selenicereus undatus HOM05D004845 ORTHO05D005957 4.1e-98 363.6 867 43.9
Aqoxy7G00060 Aquilegia oxysepala HOM05D004845 ORTHO05D005957 6.1e-94 349.7 852 41.7
Sc12g0009860 Simmondsia chinensis HOM05D004845 ORTHO05D005957 8.8e-93 345.9 870 41.7
ECA232G1750 Erigeron canadensis HOM05D004845 ORTHO05D005957 4.4e-92 343.6 805 41.6
EL10Ac9g21102 Beta vulgaris HOM05D004845 ORTHO05D005957 1.4e-85 322.0 865 41.0
TPR.G8763 Trifolium pratense HOM05D004845 ORTHO05D005957 7.5e-84 316.2 826 38.1
THA.LOC104817934 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 1.3e-83 315.5 624 39.1
Medtr8g015610 Medicago truncatula HOM05D004845 ORTHO05D005957 1.8e-82 311.6 672 36.2
Atru.chr1.3631 Acer truncatum HOM05D001194 ORTHO05D005909 4.1e-82 310.5 340 57.4
PGR102G0505 Punica granatum HOM05D004845 ORTHO05D005957 4.7e-78 297.0 853 41.0
Oeu026736.3 Olea europaea HOM05D004845 ORTHO05D005957 2.6e-76 291.2 835 34.4
HanXRQChr09g0276331 Helianthus annuus HOM05D004845 ORTHO05D005957 1.2e-70 272.3 837 39.7
THA.LOC104810560 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 2.3e-69 268.1 669 35.4
AUR62038325 Chenopodium quinoa HOM05D004845 ORTHO05D005957 8.3e-67 259.6 723 35.1
DCAR_007608 Daucus carota HOM05D004845 ORTHO05D005957 3.5e-65 254.2 856 36.6
Lsat_1_v5_gn_4_95940 Lactuca sativa HOM05D004845 ORTHO05D005957 1.9e-63 248.4 835 38.0
CARHR097190 Cardamine hirsuta HOM05D004845 ORTHO05D005957 4.0e-61 240.7 866 35.7
AUR62023919 Chenopodium quinoa HOM05D004845 ORTHO05D005957 8.9e-61 239.6 755 34.0
AL3G35330 Arabidopsis lyrata HOM05D004845 ORTHO05D005957 9.8e-60 236.1 886 34.7
Carub.0003s2130 Capsella rubella HOM05D004845 ORTHO05D005957 8.3e-59 233.0 894 33.9
Ah.01g016900 Amaranthus hybridus HOM05D004845 ORTHO05D005957 2.8e-54 218.0 852 37.4
Thhalv10019924m.g Eutrema salsugineum HOM05D004845 ORTHO05D005957 4.7e-54 217.2 902 33.3
AT3G21290 Arabidopsis thaliana HOM05D004845 ORTHO05D005957 4.0e-53 214.2 663 32.4
Sp3g19330 Schrenkiella parvula HOM05D004845 ORTHO05D005957 1.5e-52 212.2 712 31.9
SGA_v2.0_scaffold71G23747 Striga asiatica HOM05D004845 ORTHO05D005957 2.0e-52 211.8 378 42.3
BcaB06g26218 Brassica carinata HOM05D004845 ORTHO05D005957 1.7e-51 208.8 620 32.3
ATR0730G184 Amborella trichopoda HOM05D004845 ORTHO05D005957 2.4e-50 204.9 913 35.9
CDE10G0270 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 2.7e-49 201.4 551 34.3
Aa31LG8G7990 Aethionema arabicum HOM05D004845 ORTHO05D005957 7.3e-47 193.4 584 32.7
A05p27330 Brassica napus HOM05D004845 ORTHO05D005957 8.1e-46 189.9 626 30.8
BraA05t21625Z Brassica rapa HOM05D004845 ORTHO05D005957 8.1e-46 189.9 626 30.8
CDE10G0326 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 3.4e-44 184.5 723 30.4
BcaC05g28184 Brassica carinata HOM05D004845 ORTHO05D005957 1.1e-42 179.5 654 29.2
C05p42240 Brassica napus HOM05D004845 ORTHO05D005957 1.1e-42 179.5 654 29.2
BolC5t32952H Brassica oleracea HOM05D004845 ORTHO05D005957 1.1e-42 179.5 654 29.2
HanXRQChr05g0140141 Helianthus annuus HOM05D004845 ORTHO05D005957 2.4e-42 178.3 466 36.7
BcaC09g49066 Brassica carinata HOM05D004845 ORTHO05D005957 5.1e-40 170.6 893 30.7
Nitab4.5_0004848g0010 Nicotiana tabacum HOM05D004845 ORTHO05D005957 6.6e-40 170.2 207 49.8
SGA_v2.0_scaffold45G16992 Striga asiatica HOM05D004845 ORTHO05D005957 4.8e-38 164.1 204 50.5
Os03g0187100 Oryza sativa ssp. japonica HOM05D004845 ORTHO05D005957 5.3e-37 160.6 661 31.3
Zm00001eb006560 Zea mays HOM05D004845 ORTHO05D005957 3.2e-34 151.4 746 28.4
SEGI_05846 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 1.1e-31 142.9 730 25.6
Zm00001eb401540 Zea mays HOM05D004845 ORTHO05D005957 3.3e-31 141.4 740 27.6
Lalb_Chr14g0372881 Lupinus albus HOM05D004845 ORTHO05D005957 6.2e-30 137.1 826 31.1
unitig_749.g14049 Utricularia gibba HOM05D004845 ORTHO05D005957 2.9e-27 128.3 113 56.6
Ca_23298_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 6.4e-27 127.1 132 54.5
HPP92_028293 Vanilla planifolia HOM05D004845 ORTHO05D005957 1.4e-26 125.9 203 40.9
Ca_23296_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 4.6e-25 120.9 244 37.7
Lalb_Chr15g0087461 Lupinus albus HOM05D004845 ORTHO05D005957 8.7e-24 116.7 281 35.6
SEGI_07021 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 1.6e-22 112.5 691 24.3
C01p42950 Brassica napus HOM05D004845 ORTHO05D005957 1.1e-21 109.8 135 49.6
unitig_749.g14048 Utricularia gibba HOM05D004845 ORTHO05D005957 2.0e-20 105.5 420 29.5
HPP92_028292 Vanilla planifolia HOM05D004845 ORTHO05D005957 1.8e-13 82.4 471 26.3
SMO334G0114 Selaginella moellendorffii HOM05D004845 ORTHO05D005957 4.5e-12 77.8 120 35.8
Mapoly0021s0057 Marchantia polymorpha HOM05D004845 ORTHO05D005957 7.6e-12 77.0 138 35.5
Oeu022974.1 Olea europaea HOM05D005435 ORTHO05D007370 7.6e-12 77.0 220 37.3
CBR_g20995 Chara braunii HOM05D004845 ORTHO05D005957 5.0e-11 74.3 118 39.8
AagrBONN_evm.TU.Sc2ySwM_344.5033 Anthoceros agrestis HOM05D004845 ORTHO05D005957 2.7e-09 68.6 229 28.8
BolC1t04238H Brassica oleracea HOM05D004845 ORTHO05D005957 8.7e-08 63.5 55 58.2
Medtr1g021875 Medicago truncatula HOM05D004845 ORTHO05D005957 1.1e-07 63.2 154 35.1


User provided reference genes

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