Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 7.3e-261 903.3 432 100.0
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 7.3e-261 903.3 432 100.0
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 6.2e-220 767.3 431 83.3
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 1.9e-216 755.7 433 82.4
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 2.2e-212 742.3 428 81.3
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 7.4e-205 717.2 427 78.7
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 1.3e-196 689.9 426 74.9
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 2.2e-196 689.1 427 77.5
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 4.1e-195 684.9 426 74.9
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 5.3e-195 684.5 426 75.4
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 2.6e-194 682.2 425 75.1
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 5.9e-194 681.0 430 75.1
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 5.9e-194 681.0 427 74.0
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 5.9e-194 681.0 428 74.3
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.0e-193 680.2 424 73.8
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 1.3e-193 679.9 425 75.3
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 1.7e-193 679.5 425 74.6
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 5.0e-193 677.9 423 74.2
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.9e-192 676.0 424 73.1
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 3.2e-192 675.2 425 73.9
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 3.2e-192 675.2 425 74.1
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 4.2e-192 674.9 432 74.3
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 4.2e-192 674.9 424 75.2
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 2.1e-191 672.5 431 72.4
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 2.1e-191 672.5 426 74.6
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 3.6e-191 671.8 425 72.5
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 4.7e-191 671.4 425 72.2
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 6.1e-191 671.0 433 73.2
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 1.8e-190 669.5 425 73.4
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.8e-190 669.5 429 73.4
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 2.3e-190 669.1 426 73.2
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 2.3e-190 669.1 431 72.2
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 2.3e-190 669.1 425 73.6
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 2.3e-190 669.1 425 73.2
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 3.0e-190 668.7 424 72.4
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 3.0e-190 668.7 431 72.2
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 6.7e-190 667.5 427 74.5
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 1.1e-189 666.8 428 74.1
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 2.6e-189 665.6 426 72.8
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 2.6e-189 665.6 420 74.0
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 2.6e-189 665.6 426 72.5
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 7.4e-189 664.1 426 72.8
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 2.8e-188 662.1 426 72.8
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 6.3e-188 661.0 426 72.8
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 8.2e-188 660.6 434 71.0
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 8.2e-188 660.6 434 71.0
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 1.4e-187 659.8 372 82.0
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 1.4e-187 659.8 431 71.2
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 3.1e-187 658.7 427 72.6
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 3.1e-187 658.7 432 72.7
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 5.3e-187 657.9 426 72.5
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 9.1e-187 657.1 426 71.4
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 3.5e-186 655.2 426 71.4
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 4.5e-186 654.8 426 72.1
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 7.7e-186 654.1 427 71.0
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 1.0e-185 653.7 424 72.4
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 6.5e-185 651.0 428 71.0
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 1.1e-184 650.2 426 70.7
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 2.5e-184 649.0 430 71.2
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 3.2e-184 648.7 420 70.7
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 3.2e-184 648.7 423 69.5
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 4.2e-184 648.3 353 82.7
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 5.5e-184 647.9 426 72.5
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 7.2e-184 647.5 429 71.6
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 2.1e-183 646.0 424 71.5
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 4.7e-183 644.8 428 70.6
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 8.0e-183 644.0 427 70.0
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 1.4e-182 643.3 424 71.2
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 1.8e-182 642.9 428 70.8
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 1.2e-181 640.2 420 71.4
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 4.4e-181 638.3 433 70.0
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 7.5e-181 637.5 425 70.6
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 1.7e-180 636.3 427 70.5
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 4.8e-180 634.8 424 70.3
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 4.8e-180 634.8 426 71.4
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 7.0e-179 630.9 424 70.3
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 4.5e-178 628.2 427 68.9
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 4.5e-178 628.2 421 68.2
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 7.7e-178 627.5 430 69.3
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 5.0e-177 624.8 424 67.9
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 2.7e-175 619.0 431 70.1
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 2.3e-174 615.9 355 77.5
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 2.0e-173 612.8 426 69.5
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 5.7e-173 611.3 419 66.1
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 9.8e-173 610.5 431 67.1
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 4.8e-172 608.2 422 66.4
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 1.1e-171 607.1 426 67.1
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 1.4e-171 606.7 341 79.2
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 1.2e-170 603.6 420 66.2
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 7.7e-170 600.9 419 66.1
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 1.3e-169 600.1 427 64.6
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 2.3e-169 599.4 422 66.8
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 6.6e-169 597.8 419 65.2
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 3.3e-168 595.5 389 69.2
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 4.2e-168 595.1 420 66.0
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 1.2e-167 593.6 335 79.1
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 1.2e-167 593.6 430 66.0
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 3.6e-167 592.0 424 66.7
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 8.0e-167 590.9 427 65.1
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 1.0e-166 590.5 427 64.9
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 1.4e-166 590.1 427 65.1
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 1.8e-166 589.7 427 64.6
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 3.4e-165 585.5 421 64.8
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 3.4e-165 585.5 421 64.8
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 2.8e-164 582.4 352 73.0
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 1.1e-163 580.5 356 71.6
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 3.5e-162 575.5 440 61.1
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 2.3e-161 572.8 444 62.8
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 1.9e-160 569.7 402 65.9
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 3.3e-160 568.9 364 69.8
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 3.1e-158 562.4 366 69.1
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 6.4e-156 554.7 426 62.2
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 7.5e-149 531.2 282 81.6
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 2.2e-140 503.1 357 64.4
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 1.4e-139 500.4 282 77.3
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 7.3e-136 488.0 363 61.4
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 1.4e-134 483.8 363 59.8
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 4.6e-130 468.8 356 62.1
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 2.5e-120 436.4 322 65.8
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 6.9e-110 401.7 211 85.3
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 6.9e-102 375.2 209 78.0
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 6.9e-102 375.2 215 76.7
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 2.2e-100 370.2 357 52.1
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 1.4e-91 340.9 302 53.6
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 9.8e-64 248.4 228 55.7
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 1.2e-56 224.9 370 39.2
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.3e-31 141.7 94 63.8
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 1.3e-28 131.7 198 38.4
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 1.1e-25 122.1 80 65.0
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 1.6e-18 98.2 122 43.4
CSS0018959 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D112597 7.6e-08 62.8 57 56.1
Aa31LG8G11530 Aethionema arabicum HOM05D006015 ORTHO05D059074 4.2e-06 57.0 77 44.2


User provided reference genes

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