Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 5.7e-161 570.9 288 100.0
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 1.9e-132 476.1 240 99.6
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 1.5e-108 396.7 234 84.6
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 1.3e-107 393.7 242 81.8
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 2.0e-105 386.3 238 83.2
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 6.4e-104 381.3 251 76.9
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 1.4e-103 380.2 237 79.3
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 1.1e-100 370.5 226 80.5
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 3.3e-100 369.0 247 73.7
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 3.3e-100 369.0 248 74.6
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 2.8e-99 365.9 246 74.0
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 3.6e-99 365.5 261 71.3
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 8.1e-99 364.4 244 74.6
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 1.8e-98 363.2 249 74.7
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 2.6e-97 359.4 244 74.6
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 7.6e-97 357.8 240 74.6
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 6.4e-96 354.8 233 76.8
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 8.4e-96 354.4 247 73.7
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 1.4e-95 353.6 247 73.7
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 1.9e-95 353.2 277 66.8
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 1.9e-95 353.2 236 75.8
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 3.2e-95 352.4 240 75.0
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 4.2e-95 352.1 238 72.7
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 7.1e-95 351.3 238 71.8
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 7.1e-95 351.3 238 71.8
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 1.2e-94 350.5 248 73.8
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 1.2e-94 350.5 236 75.4
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 2.7e-94 349.4 250 73.2
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 2.7e-94 349.4 240 72.9
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 1.0e-93 347.4 244 73.8
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 3.0e-93 345.9 241 73.0
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 3.9e-93 345.5 228 75.0
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 6.7e-93 344.7 238 76.1
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 8.7e-93 344.4 240 72.1
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 1.5e-92 343.6 244 73.0
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 2.5e-92 342.8 238 73.5
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 9.6e-92 340.9 265 67.5
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 1.1e-90 337.4 226 74.3
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 3.1e-90 335.9 226 74.3
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 4.0e-90 335.5 240 70.8
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 4.0e-90 335.5 250 70.8
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 5.3e-90 335.1 245 71.4
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 5.3e-90 335.1 241 71.8
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 1.5e-89 333.6 226 73.9
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 1.5e-89 333.6 247 70.9
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 2.0e-89 333.2 240 70.0
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 1.0e-88 330.9 227 72.7
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 1.7e-88 330.1 226 73.0
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 2.9e-88 329.3 235 70.2
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 4.9e-88 328.6 237 71.3
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 4.9e-88 328.6 235 70.2
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 1.1e-87 327.4 234 71.4
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 5.5e-87 325.1 238 66.4
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 7.1e-87 324.7 250 67.6
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 7.9e-86 321.2 246 65.9
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 1.3e-85 320.5 238 68.1
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 1.3e-85 320.5 270 64.4
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 1.3e-85 320.5 234 70.1
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 2.3e-85 319.7 240 67.9
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 3.0e-85 319.3 264 64.8
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 3.0e-85 319.3 254 68.5
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 5.1e-85 318.5 246 64.6
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 6.7e-85 318.2 234 69.7
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 8.7e-85 317.8 246 65.9
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 8.7e-85 317.8 218 72.9
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 1.5e-84 317.0 240 69.2
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 1.5e-84 317.0 228 70.6
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 3.3e-84 315.8 270 64.1
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 3.3e-84 315.8 240 66.7
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 5.7e-84 315.1 269 63.9
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 7.4e-84 314.7 234 67.1
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 1.3e-83 313.9 234 67.1
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 1.3e-83 313.9 236 66.9
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 2.8e-83 312.8 234 67.1
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 6.3e-83 311.6 246 63.4
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 6.3e-83 311.6 246 64.6
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 6.3e-83 311.6 246 64.6
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 8.2e-83 311.2 235 67.2
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 8.2e-83 311.2 235 67.2
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.4e-82 310.5 269 63.2
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 1.8e-82 310.1 247 63.6
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 3.1e-82 309.3 237 65.4
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 4.1e-82 308.9 237 65.4
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 4.1e-82 308.9 247 62.8
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 2.6e-81 306.2 237 64.6
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 2.2e-80 303.1 266 58.6
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 3.2e-79 299.3 253 64.0
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 1.2e-78 297.4 239 65.7
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 1.2e-78 297.4 233 66.1
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 3.9e-77 292.4 278 54.3
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 8.7e-77 291.2 239 61.5
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 9.7e-76 287.7 249 58.2
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 2.4e-74 283.1 268 56.0
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 2.2e-72 276.6 213 65.7
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 3.0e-69 266.2 229 64.6
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 2.8e-67 259.6 253 55.3
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 6.3e-67 258.5 191 70.2
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 9.1e-66 254.6 175 73.7
Cpa.g.sc171.9 Carica papaya HOM05D006878 ORTHO05D008579 1.0e-56 224.6 131 81.7
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 2.1e-54 216.9 268 44.8
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 1.8e-53 213.8 221 53.4
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 4.1e-50 202.6 258 43.4
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 1.0e-48 198.0 243 50.6
HPP92_022669 Vanilla planifolia HOM05D006878 ORTHO05D008579 6.1e-46 188.7 121 74.4
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 3.4e-44 183.0 238 47.5
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 2.9e-40 169.9 255 42.4
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 5.0e-40 169.1 180 46.7
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 3.1e-34 149.8 121 61.2
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.9e-27 126.7 149 53.7
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 6.4e-27 125.6 114 57.9
PRCOL_00001512 Prasinoderma coloniale HOM05D006878 ORTHO05D008579 2.0e-20 104.0 139 38.1
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 2.6e-20 103.6 104 58.7
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 7.0e-18 95.5 107 50.5
Actinidia36205 Actinidia chinensis HOM05D006878 ORTHO05D008579 6.4e-11 72.4 42 73.8
FAN23G0458 Fragaria x ananassa HOM05D006878 ORTHO05D008579 7.8e-09 65.5 38 81.6
Pp3c4_16200 Physcomitrium patens HOM05D006878 ORTHO05D008579 3.9e-08 63.2 133 35.3
Actinidia36204 Actinidia chinensis HOM05D006878 ORTHO05D008579 1.9e-07 60.8 65 58.5
FAN23G0356 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.6e-06 57.8 59 44.1


User provided reference genes

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