Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001307 Camellia sinensis var. sinensis HOM05D005682 ORTHO05D007050 2.7e-124 448.7 236 100.0
Actinidia04079 Actinidia chinensis HOM05D005682 ORTHO05D007050 8.5e-78 294.3 214 71.0
Dinv11711 Davidia involucrata HOM05D005682 ORTHO05D007050 1.5e-66 256.9 223 61.9
Rhsim09G0074000 Rhododendron simsii HOM05D005682 ORTHO05D007050 1.4e-64 250.4 214 65.9
Manes.11G108701 Manihot esculenta HOM05D005682 ORTHO05D007050 1.8e-56 223.4 207 58.0
Potri.007G070400 Populus trichocarpa HOM05D005682 ORTHO05D007050 7.0e-56 221.5 239 50.2
GSVIVG01010197001 Vitis vinifera HOM05D005682 ORTHO05D007050 2.6e-55 219.5 214 51.9
Cfa008712 Carpinus fangiana HOM05D005682 ORTHO05D007050 2.9e-54 216.1 212 54.7
Sabra07G0059000 Salix brachista HOM05D005682 ORTHO05D007050 8.5e-54 214.5 238 49.2
Sabra07G0059100 Salix brachista HOM05D005682 ORTHO05D007050 1.9e-53 213.4 238 49.2
Prupe.1G345800 Prunus persica HOM05D005682 ORTHO05D007050 9.4e-53 211.1 235 50.2
QL03p043857 Quercus lobata HOM05D005682 ORTHO05D007050 9.4e-53 211.1 206 54.4
vmacro10900 Vaccinium macrocarpon HOM05D005682 ORTHO05D007050 9.4e-53 211.1 311 46.3
Lj6A721G56 Lonicera japonica HOM05D005682 ORTHO05D007050 1.6e-52 210.3 248 50.0
Haze_11722 Corylus avellana HOM05D005682 ORTHO05D007050 3.0e-51 206.1 212 52.8
RcHm_v2.0_Chr4g0446491 Rosa chinensis HOM05D005682 ORTHO05D007050 1.5e-50 203.8 233 48.9
TAR622G0093 Trochodendron aralioides HOM05D005682 ORTHO05D007050 3.4e-50 202.6 215 51.2
Atru.chr11.1182 Acer truncatum HOM05D005682 ORTHO05D007050 5.7e-50 201.8 216 50.9
TWI74G0147 Tripterygium wilfordii HOM05D005682 ORTHO05D007050 8.3e-49 198.0 187 53.5
Thecc.02G161600 Theobroma cacao HOM05D005682 ORTHO05D007050 2.4e-48 196.4 235 43.4
CiPaw.05G167300 Carya illinoinensis HOM05D005682 ORTHO05D007050 3.1e-48 196.1 211 51.7
Glyma.11G102200 Glycine max HOM05D005682 ORTHO05D007050 5.4e-48 195.3 200 52.5
FAN17G1521 Fragaria x ananassa HOM05D005682 ORTHO05D007050 7.0e-48 194.9 225 48.4
Ciclev10030666m.g Citrus clementina HOM05D005682 ORTHO05D007050 9.1e-48 194.5 211 48.8
Duzib132G1218 Durio zibethinus HOM05D005682 ORTHO05D007050 9.1e-48 194.5 199 49.7
MD13G1007100 Malus domestica HOM05D005682 ORTHO05D007050 5.9e-47 191.8 211 49.8
Peaxi162Scf00363g00730 Petunia axillaris HOM05D005682 ORTHO05D007050 1.3e-46 190.7 214 49.1
PSO063G1542 Papaver somniferum HOM05D005682 ORTHO05D007050 2.9e-46 189.5 187 50.8
FAN07G1253 Fragaria x ananassa HOM05D005682 ORTHO05D007050 3.8e-46 189.1 212 50.0
Sopen02g009170 Solanum pennellii HOM05D005682 ORTHO05D007050 5.0e-46 188.7 219 47.9
PSO782G3049 Papaver somniferum HOM05D005682 ORTHO05D007050 6.5e-46 188.3 187 51.9
PGR044G2237 Punica granatum HOM05D005682 ORTHO05D007050 8.5e-46 188.0 191 51.3
Solyc02g055460.3 Solanum lycopersicum HOM05D005682 ORTHO05D007050 8.5e-46 188.0 219 47.5
Nn4g24940 Nelumbo nucifera HOM05D005682 ORTHO05D007050 1.1e-45 187.6 212 46.2
Duzib052G0545 Durio zibethinus HOM05D005682 ORTHO05D007050 4.2e-45 185.7 206 45.6
arahy.Tifrunner.gnm1.ann1.3I7IYH Arachis hypogaea HOM05D005682 ORTHO05D007050 7.2e-45 184.9 217 48.8
FvH4_4g36771 Fragaria vesca HOM05D005682 ORTHO05D007050 7.2e-45 184.9 231 44.2
VMungo1127G0377 Vigna mungo HOM05D005682 ORTHO05D007050 7.2e-45 184.9 201 51.7
DCAR_002567 Daucus carota HOM05D005682 ORTHO05D007050 2.7e-44 183.0 211 47.9
Lalb_Chr01g0001491 Lupinus albus HOM05D005682 ORTHO05D007050 3.6e-44 182.6 198 49.5
arahy.Tifrunner.gnm1.ann1.H4B4B0 Arachis hypogaea HOM05D005682 ORTHO05D007050 4.7e-44 182.2 217 48.4
ClCG09G004600 Citrullus lanatus HOM05D005682 ORTHO05D007050 4.7e-44 182.2 208 46.6
Gohir.A13G059600 Gossypium hirsutum HOM05D005682 ORTHO05D007050 4.7e-44 182.2 206 44.2
Aqoxy2G03805 Aquilegia oxysepala HOM05D005682 ORTHO05D007050 6.1e-44 181.8 234 44.4
Gorai.013G070900 Gossypium raimondii HOM05D005682 ORTHO05D007050 8.0e-44 181.4 206 44.2
Eucgr.J00855 Eucalyptus grandis HOM05D005682 ORTHO05D007050 1.8e-43 180.3 203 49.8
Gohir.D13G062400 Gossypium hirsutum HOM05D005682 ORTHO05D007050 1.2e-42 177.6 206 43.7
Oeu033538.1 Olea europaea HOM05D005682 ORTHO05D007050 4.4e-42 175.6 209 47.4
Phvul.011G031200 Phaseolus vulgaris HOM05D005682 ORTHO05D007050 4.4e-42 175.6 201 49.3
HanXRQChr17g0540811 Helianthus annuus HOM05D005682 ORTHO05D007050 5.7e-42 175.3 221 46.6
Lsat_1_v5_gn_3_33580 Lactuca sativa HOM05D005682 ORTHO05D007050 9.8e-42 174.5 219 44.7
Sed0007950 Sechium edule HOM05D005682 ORTHO05D007050 9.8e-42 174.5 204 45.6
Psat7g173480 Pisum sativum HOM05D005682 ORTHO05D007050 1.7e-41 173.7 201 48.8
ECA246G2025 Erigeron canadensis HOM05D005682 ORTHO05D007050 4.9e-41 172.2 206 46.1
EL10Ac9g20684 Beta vulgaris HOM05D005682 ORTHO05D007050 6.3e-41 171.8 199 44.2
Ca_03025_v3 Cicer arietinum L. HOM05D005682 ORTHO05D007050 6.3e-41 171.8 211 46.9
CANSAT64G0530 Cannabis sativa HOM05D005682 ORTHO05D007050 8.3e-41 171.4 205 46.3
THA.LOC104826522 Tarenaya hassleriana HOM05D005682 ORTHO05D007050 8.3e-41 171.4 236 39.8
TPR.G32358 Trifolium pratense HOM05D005682 ORTHO05D007050 1.1e-40 171.0 188 48.9
Hund13152 Selenicereus undatus HOM05D005682 ORTHO05D007050 1.4e-40 170.6 200 45.0
Sc06g0007890 Simmondsia chinensis HOM05D005682 ORTHO05D007050 1.4e-40 170.6 214 43.5
CsaV3_7G030540 Cucumis sativus L. HOM05D005682 ORTHO05D007050 3.1e-40 169.5 205 45.9
MSTRG.433 Avicennia marina HOM05D005682 ORTHO05D007050 9.1e-40 167.9 213 41.3
MELO3C023602.2 Cucumis melo HOM05D005682 ORTHO05D007050 2.7e-39 166.4 205 45.4
BraA05t21816Z Brassica rapa HOM05D005682 ORTHO05D007050 1.3e-38 164.1 212 42.5
AL3G33230 Arabidopsis lyrata HOM05D005682 ORTHO05D007050 2.9e-38 162.9 233 39.1
BraA05t21829Z Brassica rapa HOM05D005682 ORTHO05D007050 5.0e-38 162.2 214 41.6
A05p29780 Brassica napus HOM05D005682 ORTHO05D007050 1.1e-37 161.0 214 41.6
Lj3g0015709 Lotus japonicus HOM05D005682 ORTHO05D007050 1.1e-37 161.0 197 47.7
BcaC05g28416 Brassica carinata HOM05D005682 ORTHO05D007050 1.5e-37 160.6 214 41.1
Medtr4g074610 Medicago truncatula HOM05D005682 ORTHO05D007050 1.5e-37 160.6 196 46.4
C05p45010 Brassica napus HOM05D005682 ORTHO05D007050 4.3e-37 159.1 214 40.7
Migut.L00859 Erythranthe guttata HOM05D005682 ORTHO05D007050 5.6e-37 158.7 212 41.5
Thhalv10019965m.g Eutrema salsugineum HOM05D005682 ORTHO05D007050 9.5e-37 157.9 235 37.4
BcaB06g26047 Brassica carinata HOM05D005682 ORTHO05D007050 4.7e-36 155.6 212 40.6
BolC5t33225H Brassica oleracea HOM05D005682 ORTHO05D007050 4.7e-36 155.6 211 40.8
AUR62018178 Chenopodium quinoa HOM05D005682 ORTHO05D007050 1.2e-34 151.0 189 42.3
Carub.0003s1966 Capsella rubella HOM05D005682 ORTHO05D007050 2.0e-34 150.2 212 39.6
SalBow2G1379 Salvia bowleyana HOM05D005682 ORTHO05D007050 2.0e-34 150.2 224 40.2
AT3G19780 Arabidopsis thaliana HOM05D005682 ORTHO05D007050 2.6e-34 149.8 212 38.7
AUR62038663 Chenopodium quinoa HOM05D005682 ORTHO05D007050 2.6e-34 149.8 189 41.3
Aa31LG8G6560 Aethionema arabicum HOM05D005682 ORTHO05D007050 3.4e-34 149.4 211 40.3
Ah.14g085910 Amaranthus hybridus HOM05D005682 ORTHO05D007050 1.3e-33 147.5 198 39.4
Cc11_g00090 Coffea canephora HOM05D005682 ORTHO05D007050 6.4e-33 145.2 229 40.6
Sp3g17800 Schrenkiella parvula HOM05D005682 ORTHO05D007050 2.4e-32 143.3 231 36.8
ATR0618G435 Amborella trichopoda HOM05D005682 ORTHO05D000625 4.1e-32 142.5 189 40.7
CAN.G157.17 Capsicum annuum HOM05D005682 ORTHO05D007050 5.4e-32 142.1 133 54.9
HPP92_008562 Vanilla planifolia HOM05D005682 ORTHO05D007050 7.3e-29 131.7 174 40.8
Cc11_g04390 Coffea canephora HOM05D005682 ORTHO05D007050 6.6e-22 108.6 139 43.9
Zm00001eb221340 Zea mays HOM05D005682 ORTHO05D007050 3.6e-20 102.8 205 30.7
SEGI_38899 Sequoiadendron giganteum HOM05D005682 ORTHO05D007050 4.7e-20 102.4 168 33.9
BcaC05g28407 Brassica carinata HOM05D005682 ORTHO05D007050 2.3e-19 100.1 137 39.4
SHI13894 Sapria himalayana HOM05D005682 ORTHO05D007050 3.4e-18 96.3 104 45.2
C05p44920 Brassica napus HOM05D005682 ORTHO05D007050 5.8e-18 95.5 177 33.3
CARHR095290 Cardamine hirsuta HOM05D005682 ORTHO05D007050 4.1e-16 89.4 145 35.2
unitig_699.g19973 Utricularia gibba HOM05D005682 ORTHO05D007050 4.1e-16 89.4 167 31.7
Nitab4.5_0028170g0010 Nicotiana tabacum HOM05D005682 ORTHO05D007050 3.1e-11 73.2 114 39.5
SHI13893 Sapria himalayana HOM05D005682 ORTHO05D007050 5.2e-11 72.4 58 58.6
Nitab4.5_0000139g0140 Nicotiana tabacum HOM05D005682 ORTHO05D007050 8.9e-11 71.6 98 41.8
CAN.G157.16 Capsicum annuum HOM05D005682 ORTHO05D007050 2.9e-09 66.6 70 48.6
C05p44850 Brassica napus HOM05D002209 ORTHO05D007926 1.2e-07 61.2 104 38.5
Pp3c7_6630 Physcomitrium patens HOM05D005682 ORTHO05D007050 1.3e-06 57.8 160 29.4
CARHR095300 Cardamine hirsuta HOM05D005682 ORTHO05D007050 1.7e-06 57.4 69 44.9


User provided reference genes

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