Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001294 Camellia sinensis var. sinensis HOM05D006349 ORTHO05D008205 5.1e-60 234.6 150 100.0
vmacro19434 Vaccinium macrocarpon HOM05D006349 ORTHO05D008205 4.6e-53 211.5 150 90.0
Hma1.2p1_0104F.1_g050210 Hydrangea macrophylla HOM05D006349 ORTHO05D008205 7.3e-51 204.1 149 88.6
Phvul.009G190100 Phaseolus vulgaris HOM05D006349 ORTHO05D008205 4.7e-50 201.4 149 87.9
Nitab4.5_0000785g0220 Nicotiana tabacum HOM05D006349 ORTHO05D008205 6.2e-50 201.1 149 87.2
Nitab4.5_0004605g0070 Nicotiana tabacum HOM05D006349 ORTHO05D008205 1.8e-49 199.5 149 86.6
Oeu006473.1 Olea europaea HOM05D006349 ORTHO05D008205 2.4e-49 199.1 149 85.9
Actinidia37657 Actinidia chinensis HOM05D006349 ORTHO05D008205 5.2e-49 198.0 148 87.8
CANSAT80G2583 Cannabis sativa HOM05D006349 ORTHO05D008205 5.2e-49 198.0 149 85.2
Glyma.04G174400 Glycine max HOM05D006349 ORTHO05D008205 5.2e-49 198.0 149 87.2
arahy.Tifrunner.gnm1.ann1.GD5F3R Arachis hypogaea HOM05D006349 ORTHO05D008205 6.9e-49 197.6 149 87.2
GSVIVG01008063001 Vitis vinifera HOM05D006349 ORTHO05D008205 9.0e-49 197.2 149 85.2
COL.COLO4_05705 Corchorus olitorius HOM05D006349 ORTHO05D008205 1.2e-48 196.8 146 86.3
Gohir.A13G008300 Gossypium hirsutum HOM05D006349 ORTHO05D008205 2.6e-48 195.7 149 84.6
Atru.chr9.2318 Acer truncatum HOM05D006349 ORTHO05D008205 5.8e-48 194.5 149 83.2
Glyma.06G190300 Glycine max HOM05D006349 ORTHO05D008205 7.6e-48 194.1 149 83.2
QL10p015567 Quercus lobata HOM05D006349 ORTHO05D008205 7.6e-48 194.1 148 84.5
arahy.Tifrunner.gnm1.ann1.FR12T1 Arachis hypogaea HOM05D006349 ORTHO05D008205 9.9e-48 193.7 149 85.2
Lalb_Chr08g0235931 Lupinus albus HOM05D006349 ORTHO05D008205 9.9e-48 193.7 149 85.2
PGSC0003DMG400025345 Solanum tuberosum HOM05D006349 ORTHO05D008205 1.3e-47 193.4 149 83.9
Gohir.D13G009000 Gossypium hirsutum HOM05D006349 ORTHO05D008205 1.7e-47 193.0 149 83.2
Gorai.013G009800 Gossypium raimondii HOM05D006349 ORTHO05D008205 1.7e-47 193.0 149 83.2
Duzib068G1139 Durio zibethinus HOM05D006349 ORTHO05D008205 2.2e-47 192.6 149 83.2
Eucgr.B00425 Eucalyptus grandis HOM05D006349 ORTHO05D008205 2.2e-47 192.6 149 82.6
Lj9P459T48 Lonicera japonica HOM05D006349 ORTHO05D008205 3.8e-47 191.8 150 84.0
Solyc03g113240.3 Solanum lycopersicum HOM05D006349 ORTHO05D008205 3.8e-47 191.8 149 83.2
Sopen03g032300 Solanum pennellii HOM05D006349 ORTHO05D008205 3.8e-47 191.8 149 83.2
ClCG01G014390 Citrullus lanatus HOM05D006349 ORTHO05D008205 6.4e-47 191.0 149 83.2
Dinv38665 Davidia involucrata HOM05D006349 ORTHO05D008205 6.4e-47 191.0 141 88.7
EL10Ac5g10944 Beta vulgaris HOM05D006349 ORTHO05D008205 8.4e-47 190.7 149 82.6
CAN.G999.48 Capsicum annuum HOM05D006349 ORTHO05D008205 1.1e-46 190.3 149 82.6
Potri.012G070600 Populus trichocarpa HOM05D006349 ORTHO05D008205 1.1e-46 190.3 149 81.2
Manes.06G096400 Manihot esculenta HOM05D006349 ORTHO05D008205 1.4e-46 189.9 149 81.2
Psat7g112120 Pisum sativum HOM05D006349 ORTHO05D008205 1.4e-46 189.9 149 83.2
Cfa018991 Carpinus fangiana HOM05D006349 ORTHO05D008205 2.4e-46 189.1 149 80.5
PGR083G1017 Punica granatum HOM05D006349 ORTHO05D008205 2.4e-46 189.1 149 81.9
Sc12g0006210 Simmondsia chinensis HOM05D006349 ORTHO05D008205 2.4e-46 189.1 149 81.9
Sabra15G0090500 Salix brachista HOM05D006349 ORTHO05D008205 3.2e-46 188.7 149 82.6
CsaV3_1G007920 Cucumis sativus L. HOM05D006349 ORTHO05D008205 4.2e-46 188.3 149 81.9
Cpa.g.sc17.203 Carica papaya HOM05D006349 ORTHO05D008205 7.1e-46 187.6 149 81.9
Peaxi162Scf00009g00321 Petunia axillaris HOM05D006349 ORTHO05D008205 7.1e-46 187.6 149 83.2
Nn4g23038 Nelumbo nucifera HOM05D006349 ORTHO05D008205 1.2e-45 186.8 149 81.2
Potri.015G065100 Populus trichocarpa HOM05D006349 ORTHO05D008205 1.2e-45 186.8 149 81.9
HanXRQChr09g0271121 Helianthus annuus HOM05D006349 ORTHO05D008205 2.1e-45 186.0 149 81.2
MELO3C002208.2 Cucumis melo HOM05D006349 ORTHO05D008205 2.7e-45 185.7 149 81.2
MBI19_g30284_MAGBIO Magnolia biondii HOM05D006349 ORTHO05D008205 3.5e-45 185.3 149 80.5
TPR.G11993 Trifolium pratense HOM05D006349 ORTHO05D008205 6.0e-45 184.5 149 81.2
Ah.02g113210 Amaranthus hybridus HOM05D006349 ORTHO05D008205 1.0e-44 183.7 150 78.7
MD06G1188100 Malus domestica HOM05D006349 ORTHO05D008205 1.0e-44 183.7 149 79.9
Cc04_g15550 Coffea canephora HOM05D006349 ORTHO05D008205 3.0e-44 182.2 149 79.9
ECA232G0565 Erigeron canadensis HOM05D006349 ORTHO05D008205 3.0e-44 182.2 149 79.2
AUR62008355 Chenopodium quinoa HOM05D006349 ORTHO05D008205 3.9e-44 181.8 148 80.4
FAN13G0390 Fragaria x ananassa HOM05D006349 ORTHO05D008205 3.9e-44 181.8 149 79.9
Lj1g0000266 Lotus japonicus HOM05D006349 ORTHO05D008205 6.6e-44 181.0 149 80.5
CiPaw.11G038000 Carya illinoinensis HOM05D006349 ORTHO05D008205 8.7e-44 180.6 149 78.5
AUR62021741 Chenopodium quinoa HOM05D006349 ORTHO05D008205 8.7e-44 180.6 149 78.5
FvH4_5g15500 Fragaria vesca HOM05D006349 ORTHO05D008205 1.1e-43 180.3 149 79.2
FAN04G0897 Fragaria x ananassa HOM05D006349 ORTHO05D008205 2.5e-43 179.1 149 79.2
FAN18G4547 Fragaria x ananassa HOM05D006349 ORTHO05D008205 3.3e-43 178.7 149 78.5
RcHm_v2.0_Chr7g0180591 Rosa chinensis HOM05D006349 ORTHO05D008205 3.3e-43 178.7 149 77.2
Ca_25734_v3 Cicer arietinum L. HOM05D006349 ORTHO05D008205 7.3e-43 177.6 149 79.2
Ciclev10022359m.g Citrus clementina HOM05D006349 ORTHO05D008205 1.6e-42 176.4 149 78.5
Hund02668 Selenicereus undatus HOM05D006349 ORTHO05D008205 1.6e-42 176.4 145 80.7
Migut.D01854 Erythranthe guttata HOM05D006349 ORTHO05D008205 3.6e-42 175.3 149 76.5
Thecc.03G079100 Theobroma cacao HOM05D006349 ORTHO05D008205 4.8e-42 174.9 149 77.9
SalBow7G1566 Salvia bowleyana HOM05D006349 ORTHO05D008205 6.2e-42 174.5 149 77.9
Sed0016194 Sechium edule HOM05D006349 ORTHO05D008205 8.1e-42 174.1 149 76.5
CDE07G1088 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 1.1e-41 173.7 149 75.8
Lsat_1_v5_gn_4_107320 Lactuca sativa HOM05D006349 ORTHO05D008205 1.1e-41 173.7 144 78.5
TWI81G0140 Tripterygium wilfordii HOM05D006349 ORTHO05D008205 4.0e-41 171.8 149 74.5
BolC6t39912H Brassica oleracea HOM05D006349 ORTHO05D008205 5.3e-41 171.4 149 77.9
BcaC08g46899 Brassica carinata HOM05D006349 ORTHO05D008205 6.9e-41 171.0 149 77.9
C06p48760 Brassica napus HOM05D006349 ORTHO05D008205 6.9e-41 171.0 149 77.9
BraA07t31583Z Brassica rapa HOM05D006349 ORTHO05D008205 6.9e-41 171.0 149 77.9
BolC2t09244H Brassica oleracea HOM05D006349 ORTHO05D008205 9.0e-41 170.6 149 75.8
BcaC03g15525 Brassica carinata HOM05D006349 ORTHO05D008205 1.2e-40 170.2 149 76.5
C02p32090 Brassica napus HOM05D006349 ORTHO05D008205 1.2e-40 170.2 149 76.5
BraA02t06992Z Brassica rapa HOM05D006349 ORTHO05D008205 1.2e-40 170.2 149 76.5
Medtr4g089080 Medicago truncatula HOM05D006349 ORTHO05D008205 1.2e-40 170.2 149 75.8
unitig_46.g18468 Utricularia gibba HOM05D006349 ORTHO05D008205 1.5e-40 169.9 149 74.5
A07p40410 Brassica napus HOM05D006349 ORTHO05D008205 2.0e-40 169.5 149 77.2
HPP92_022919 Vanilla planifolia HOM05D006349 ORTHO05D008205 2.0e-40 169.5 149 73.8
HPP92_022931 Vanilla planifolia HOM05D006349 ORTHO05D008205 2.0e-40 169.5 149 73.8
ATR1120G128 Amborella trichopoda HOM05D006349 ORTHO05D008205 2.6e-40 169.1 149 71.8
SGA_v2.0_scaffold7G04081 Striga asiatica HOM05D006349 ORTHO05D008205 3.4e-40 168.7 149 75.2
Aqoxy3G03265 Aquilegia oxysepala HOM05D006349 ORTHO05D008205 4.5e-40 168.3 149 74.5
DCAR_015995 Daucus carota HOM05D006349 ORTHO05D008205 4.5e-40 168.3 149 75.8
CARHR068050 Cardamine hirsuta HOM05D006349 ORTHO05D008205 9.9e-40 167.2 149 73.8
Sp5g29850 Schrenkiella parvula HOM05D006349 ORTHO05D008205 9.9e-40 167.2 149 75.8
BcaB05g24870 Brassica carinata HOM05D003553 ORTHO05D005072 4.9e-39 164.9 149 75.2
Zm00001eb160550 Zea mays HOM05D006349 ORTHO05D008205 6.4e-39 164.5 149 73.2
AL2G34620 Arabidopsis lyrata HOM05D006349 ORTHO05D008205 1.1e-38 163.7 149 73.2
Carub.0002s2152 Capsella rubella HOM05D006349 ORTHO05D008205 1.4e-38 163.3 149 73.8
PSO781G0309 Papaver somniferum HOM05D006349 ORTHO05D008205 4.2e-38 161.8 149 73.8
AT1G74730 Arabidopsis thaliana HOM05D006349 ORTHO05D008205 7.1e-38 161.0 149 72.5
TAR622G0703 Trochodendron aralioides HOM05D006349 ORTHO05D008205 2.1e-37 159.5 149 73.2
MSTRG.4410 Avicennia marina HOM05D006349 ORTHO05D008205 2.7e-37 159.1 149 73.2
MD14G1194200 Malus domestica HOM05D006349 ORTHO05D008205 2.7e-37 159.1 149 73.8
CDE04G3639 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 6.0e-37 157.9 149 71.8
Os01g0585300 Oryza sativa ssp. japonica HOM05D006349 ORTHO05D008205 1.0e-36 157.1 149 71.8
Prupe.5G186300 Prunus persica HOM05D006349 ORTHO05D008205 5.1e-36 154.8 149 71.1
BcaC08g46920 Brassica carinata HOM05D006349 ORTHO05D008205 3.1e-33 145.6 129 76.7
Thhalv10019168m.g Eutrema salsugineum HOM05D006349 ORTHO05D008205 3.1e-33 145.6 149 67.8
Haze_07380 Corylus avellana HOM05D006349 ORTHO05D008205 5.8e-32 141.4 149 68.5
Aa31LG4G4960 Aethionema arabicum HOM05D006349 ORTHO05D008205 9.3e-30 134.0 149 61.7
PSO541G4605 Papaver somniferum HOM05D006349 ORTHO05D008205 2.1e-29 132.9 149 65.1
FAN08G2244 Fragaria x ananassa HOM05D006349 ORTHO05D008205 7.4e-27 124.4 149 63.1
Pp3c20_23180 Physcomitrium patens HOM05D006349 ORTHO05D008205 2.9e-23 112.5 146 57.5
SEGI_24937 Sequoiadendron giganteum HOM05D006349 ORTHO05D008205 1.4e-22 110.2 149 57.0
SMO340G0151 Selaginella moellendorffii HOM05D006349 ORTHO05D008205 2.7e-21 105.9 147 56.5
Actinidia04919 Actinidia chinensis HOM05D006349 ORTHO05D008205 6.0e-21 104.8 59 83.1
Mapoly0105s0011 Marchantia polymorpha HOM05D006349 ORTHO05D008205 1.3e-20 103.6 146 55.5
SGA_v2.0_scaffold294G47475 Striga asiatica HOM05D006349 ORTHO05D008205 3.0e-20 102.4 127 52.0
AagrBONN_evm.TU.Sc2ySwM_362.857 Anthoceros agrestis HOM05D006349 ORTHO05D008205 7.4e-19 97.8 146 55.5
CARHR103880 Cardamine hirsuta HOM05D006349 ORTHO05D008205 1.1e-17 94.0 140 55.0
BcaC03g15526 Brassica carinata HOM05D006349 ORTHO05D008205 4.1e-17 92.0 110 58.2
Pp3c25_12400 Physcomitrium patens HOM05D006349 ORTHO05D008205 6.5e-15 84.7 97 63.9
A02p19550 Brassica napus HOM05D006349 ORTHO05D008205 1.2e-13 80.5 46 76.1
CBR_g48703 Chara braunii HOM05D006349 ORTHO05D008205 1.4e-12 77.0 148 45.9
Nn8g40820 Nelumbo nucifera HOM05D006349 ORTHO05D008205 4.5e-08 62.0 103 47.6
Nitab4.5_0006079g0040 Nicotiana tabacum HOM05D006349 ORTHO05D008205 1.0e-07 60.8 48 81.2


User provided reference genes

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