Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001263 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 8.9e-46 186.8 110 100.0
CSS0044713 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 7.3e-24 114.0 125 66.4
CSS0044305 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 2.9e-20 102.1 105 72.4
CSS0015607 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 1.4e-19 99.8 127 56.7
CSS0022093 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 1.7e-17 92.8 135 52.6
CSS0014692 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 2.3e-17 92.4 135 58.5
Dinv38852 Davidia involucrata HOM05D005006 ORTHO05D005903 1.3e-07 60.1 62 66.1
PGR031G0908 Punica granatum HOM05D005006 ORTHO05D005903 1.1e-06 57.0 86 47.7
Rhsim07G0083400 Rhododendron simsii HOM05D005006 ORTHO05D005903 1.4e-06 56.6 61 57.4
Cc08_g15850 Coffea canephora HOM05D005006 ORTHO05D005903 1.8e-06 56.2 65 53.8
Dinv37546 Davidia involucrata HOM05D005006 ORTHO05D005903 2.4e-06 55.8 62 61.3
Manes.02G011900 Manihot esculenta HOM05D005006 ORTHO05D005903 3.1e-06 55.5 81 48.1
Nitab4.5_0007099g0020 Nicotiana tabacum HOM05D005006 ORTHO05D005903 4.0e-06 55.1 67 62.7
Solyc08g082090.1 Solanum lycopersicum HOM05D005006 ORTHO05D005903 4.0e-06 55.1 64 53.1
Sopen08g030380 Solanum pennellii HOM05D005006 ORTHO05D005903 4.0e-06 55.1 64 53.1
Rhsim02G0241500 Rhododendron simsii HOM05D005006 ORTHO05D005903 6.9e-06 54.3 67 59.7
PGSC0003DMG400012296 Solanum tuberosum HOM05D005006 ORTHO05D005903 9.0e-06 53.9 64 51.6


User provided reference genes

Program Settings