Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 2.6e-47 191.8 103 100.0
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 5.6e-42 174.1 103 85.4
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.6e-41 172.6 104 85.6
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 2.8e-41 171.8 103 88.3
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 3.6e-41 171.4 103 80.6
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 4.7e-41 171.0 103 80.6
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 6.2e-41 170.6 103 81.6
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 6.2e-41 170.6 103 81.6
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 8.0e-41 170.2 103 82.5
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 8.0e-41 170.2 103 82.5
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.1e-40 169.9 103 85.4
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 4.0e-40 167.9 103 84.5
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 5.2e-40 167.5 102 80.4
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 2.6e-39 165.2 102 81.4
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 2.6e-39 165.2 103 82.5
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 2.6e-39 165.2 104 83.7
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 3.4e-39 164.9 104 80.8
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 3.4e-39 164.9 102 87.3
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 3.4e-39 164.9 103 83.5
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 4.4e-39 164.5 102 89.2
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 5.8e-39 164.1 111 76.6
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 7.5e-39 163.7 104 80.8
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 9.8e-39 163.3 104 83.7
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.7e-38 162.5 103 82.5
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 2.2e-38 162.2 97 84.5
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 2.2e-38 162.2 103 76.7
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 2.9e-38 161.8 103 83.5
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 3.7e-38 161.4 102 80.4
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 4.9e-38 161.0 97 81.4
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 6.4e-38 160.6 104 78.8
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 6.4e-38 160.6 103 78.6
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 1.1e-37 159.8 103 88.3
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 1.4e-37 159.5 97 86.6
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 1.4e-37 159.5 103 87.4
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 1.4e-37 159.5 103 87.4
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 1.9e-37 159.1 96 91.7
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 2.4e-37 158.7 109 78.9
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 2.4e-37 158.7 103 79.6
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 2.4e-37 158.7 103 76.7
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 5.4e-37 157.5 102 76.5
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 7.0e-37 157.1 103 86.4
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 9.2e-37 156.8 103 83.5
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 2.1e-36 155.6 112 76.8
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 2.1e-36 155.6 112 76.8
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 6.0e-36 154.1 102 80.4
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 1.0e-35 153.3 104 79.8
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.0e-35 153.3 96 78.1
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.0e-35 153.3 96 78.1
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 2.3e-35 152.1 97 82.5
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 3.9e-35 151.4 119 68.9
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 5.1e-35 151.0 102 81.4
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 5.1e-35 151.0 101 82.2
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 5.1e-35 151.0 104 77.9
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 6.6e-35 150.6 98 87.8
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 8.6e-35 150.2 108 71.3
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 1.5e-34 149.4 112 77.7
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 1.9e-34 149.1 109 82.6
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 2.5e-34 148.7 108 73.1
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 3.3e-34 148.3 103 78.6
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 3.3e-34 148.3 105 79.0
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 4.3e-34 147.9 109 76.1
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 4.3e-34 147.9 103 81.6
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 4.3e-34 147.9 103 81.6
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 1.6e-33 146.0 102 79.4
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 4.7e-33 144.4 113 69.9
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 6.2e-33 144.1 111 64.9
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 8.1e-33 143.7 95 84.2
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 1.1e-32 143.3 113 74.3
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 1.4e-32 142.9 111 76.6
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 1.4e-32 142.9 98 72.4
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 2.3e-32 142.1 111 77.5
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 2.3e-32 142.1 114 75.4
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 2.3e-32 142.1 92 80.4
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 3.1e-32 141.7 106 79.2
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 2.6e-31 138.7 107 73.8
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 4.4e-31 137.9 110 73.6
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 7.5e-31 137.1 85 82.4
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 1.7e-30 136.0 110 70.0
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 2.9e-30 135.2 86 81.4
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 2.9e-30 135.2 106 78.3
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 2.9e-30 135.2 109 74.3
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 6.4e-30 134.0 110 68.2
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 8.3e-30 133.7 86 80.2
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 1.1e-29 133.3 90 84.4
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 1.4e-29 132.9 115 72.2
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 1.9e-29 132.5 113 72.6
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 1.9e-29 132.5 113 72.6
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 2.4e-29 132.1 114 71.9
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 4.1e-29 131.3 84 86.9
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 4.1e-29 131.3 111 71.2
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 7.1e-29 130.6 109 66.1
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 2.7e-28 128.6 107 72.9
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 1.3e-27 126.3 102 66.7
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 1.3e-27 126.3 116 65.5
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 3.9e-27 124.8 107 72.9
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 3.9e-27 124.8 107 72.9
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 3.9e-27 124.8 90 82.2
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 3.9e-27 124.8 102 71.6
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 3.3e-26 121.7 102 57.8
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 7.3e-26 120.6 112 69.6
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 7.3e-26 120.6 113 63.7
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 9.5e-26 120.2 109 67.9
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 1.2e-25 119.8 115 67.8
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 1.2e-25 119.8 110 67.3
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 2.8e-25 118.6 106 67.9
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 6.2e-25 117.5 114 64.0
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 1.1e-24 116.7 113 65.5
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.7e-22 109.4 79 84.8
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 4.2e-21 104.8 65 84.6
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 5.4e-21 104.4 102 60.8
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 6.2e-17 90.9 71 80.3
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 1.8e-16 89.4 82 72.0
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.5e-15 86.3 97 53.6
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 2.0e-15 85.9 86 67.4
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 1.3e-14 83.2 102 54.9
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 5.4e-13 77.8 58 75.9
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 6.0e-12 74.3 115 45.2
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 1.1e-10 70.1 55 80.0
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 1.9e-10 69.3 101 49.5
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 3.6e-09 65.1 59 61.0
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 1.4e-08 63.2 103 46.6


User provided reference genes

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