Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001183 Camellia sinensis var. sinensis HOM05D001469 ORTHO05D112176 1.8e-23 111.7 55 100.0
CSS0042941 Camellia sinensis var. sinensis HOM05D001469 ORTHO05D001648 1.8e-10 68.6 53 66.0
vmacro16755 Vaccinium macrocarpon HOM05D001469 ORTHO05D001648 1.8e-10 68.6 53 71.7
Actinidia36842 Actinidia chinensis HOM05D001469 ORTHO05D001648 2.3e-10 68.2 53 73.6
Actinidia08909 Actinidia chinensis HOM05D001469 ORTHO05D001648 5.7e-09 63.5 53 69.8
Phvul.002G281400 Phaseolus vulgaris HOM05D001469 ORTHO05D001648 7.4e-09 63.2 53 64.2
TAR371G1267 Trochodendron aralioides HOM05D001469 ORTHO05D001648 4.8e-08 60.5 53 66.0
Lj5A87G66 Lonicera japonica HOM05D001469 ORTHO05D001648 6.3e-08 60.1 53 60.4
Lj4g0000743 Lotus japonicus HOM05D001469 ORTHO05D001648 1.4e-07 58.9 53 58.5
Psat7g039480 Pisum sativum HOM05D001469 ORTHO05D001648 1.4e-07 58.9 53 60.4
SalBow8G3239 Salvia bowleyana HOM05D001469 ORTHO05D001648 1.4e-07 58.9 53 58.5
Glyma.08G007500 Glycine max HOM05D001469 ORTHO05D001648 1.8e-07 58.5 53 62.3
VMungo0251G3692 Vigna mungo HOM05D001469 ORTHO05D001648 1.8e-07 58.5 53 64.2
Cc04_g05870 Coffea canephora HOM05D001469 ORTHO05D001648 2.4e-07 58.2 53 60.4
Dinv13721 Davidia involucrata HOM05D001469 ORTHO05D001648 3.1e-07 57.8 53 62.3
arahy.Tifrunner.gnm1.ann1.88B2ED Arachis hypogaea HOM05D001469 ORTHO05D001648 4.1e-07 57.4 53 58.5
arahy.Tifrunner.gnm1.ann1.IJ6373 Arachis hypogaea HOM05D001469 ORTHO05D001648 4.1e-07 57.4 53 58.5
arahy.Tifrunner.gnm1.ann1.UI8HZR Arachis hypogaea HOM05D001469 ORTHO05D001648 4.1e-07 57.4 53 58.5
Ca_16828_v3 Cicer arietinum L. HOM05D001469 ORTHO05D001648 4.1e-07 57.4 53 60.4
Actinidia25519 Actinidia chinensis HOM05D001469 ORTHO05D001648 5.3e-07 57.0 53 66.0
DCAR_021395 Daucus carota HOM05D001469 ORTHO05D001648 6.9e-07 56.6 53 60.4
CiPaw.11G000900 Carya illinoinensis HOM05D001469 ORTHO05D001648 9.0e-07 56.2 53 60.4
Dinv23225 Davidia involucrata HOM05D001469 ORTHO05D001648 1.2e-06 55.8 53 62.3
Glyma.06G163800 Glycine max HOM05D001469 ORTHO05D001648 1.2e-06 55.8 53 56.6
MD14G1147300 Malus domestica HOM05D001469 ORTHO05D001648 1.5e-06 55.5 53 60.4
Duzib084G0588 Durio zibethinus HOM05D001469 ORTHO05D001648 2.6e-06 54.7 53 56.6
Migut.H02535 Erythranthe guttata HOM05D001469 ORTHO05D001648 2.6e-06 54.7 54 57.4
VMungo1309G0299 Vigna mungo HOM05D001469 ORTHO05D001648 2.6e-06 54.7 53 54.7
Lalb_Chr07g0183821 Lupinus albus HOM05D001469 ORTHO05D001648 3.4e-06 54.3 53 58.5
Lsat_1_v5_gn_1_30260 Lactuca sativa HOM05D001469 ORTHO05D001648 4.5e-06 53.9 53 58.5
Medtr8g096190 Medicago truncatula HOM05D001469 ORTHO05D001648 4.5e-06 53.9 53 58.5
SGA_v2.0_scaffold51G18832 Striga asiatica HOM05D001469 ORTHO05D001648 4.5e-06 53.9 53 56.6
Peaxi162Scf00314g00627 Petunia axillaris HOM05D001469 ORTHO05D001648 5.9e-06 53.5 53 54.7
MELO3C003911.2 Cucumis melo HOM05D001469 ORTHO05D001648 1.0e-05 52.8 55 50.9


User provided reference genes

Program Settings