Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 7.2e-113 410.6 211 100.0
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.0e-111 404.8 211 98.6
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.0e-111 404.8 211 98.6
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.0e-111 404.8 211 98.6
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 6.8e-111 404.1 211 98.1
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.4e-110 401.7 211 98.1
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.1e-104 382.5 202 97.5
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.0e-103 378.3 211 93.8
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 8.9e-103 377.1 211 93.4
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.3e-87 325.9 195 89.2
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 2.7e-51 206.1 188 64.9
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 5.9e-38 161.8 150 61.3
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 1.0e-37 161.0 224 49.6
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 1.2e-35 154.1 105 77.1
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 1.6e-35 153.7 131 63.4
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 2.3e-34 149.8 111 70.3
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 5.1e-34 148.7 129 62.0
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 6.7e-34 148.3 148 59.5
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 1.5e-33 147.1 135 60.7
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 1.5e-33 147.1 158 56.3
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 2.0e-33 146.7 105 74.3
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 2.0e-33 146.7 129 62.0
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 2.0e-33 146.7 116 63.8
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 3.3e-33 146.0 117 65.8
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 4.3e-33 145.6 107 68.2
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 3.7e-32 142.5 140 55.7
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 3.7e-32 142.5 113 65.5
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 4.8e-32 142.1 117 64.1
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 4.8e-32 142.1 113 66.4
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 4.1e-31 139.0 162 53.7
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 3.4e-30 136.0 116 62.1
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 4.5e-30 135.6 125 60.8
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 4.5e-30 135.6 125 60.8
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 5.9e-30 135.2 165 51.5
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.7e-29 133.7 125 60.0
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 2.2e-29 133.3 117 59.8
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 1.1e-28 131.0 117 58.1
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 3.2e-28 129.4 114 59.6
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 1.6e-27 127.1 115 59.1
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 7.9e-27 124.8 108 64.8
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 3.0e-26 122.9 117 56.4
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 6.7e-26 121.7 104 62.5
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 6.7e-26 121.7 107 59.8
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 1.1e-25 120.9 121 57.0
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 1.1e-25 120.9 104 61.5
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 2.0e-25 120.2 117 57.3
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 2.0e-25 120.2 104 61.5
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 2.0e-25 120.2 104 61.5
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 2.0e-25 120.2 104 61.5
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 2.0e-25 120.2 99 63.6
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 2.6e-25 119.8 117 58.1
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 4.4e-25 119.0 117 57.3
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 5.7e-25 118.6 104 60.6
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 5.7e-25 118.6 103 62.1
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 9.7e-25 117.9 131 54.2
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 3.7e-24 115.9 113 56.6
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 4.8e-24 115.5 104 59.6
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 4.8e-24 115.5 95 61.1
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 1.4e-23 114.0 117 55.6
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 2.4e-23 113.2 106 58.5
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 9.1e-23 111.3 105 54.3
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 2.0e-22 110.2 142 43.7
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 2.0e-22 110.2 142 43.7
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 1.7e-21 107.1 80 68.8
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 1.1e-20 104.4 236 34.7
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 1.4e-18 97.4 82 62.2
CBR_g15957 Chara braunii HOM05D000019 ORTHO05D000002 9.7e-17 91.3 99 49.5
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 9.7e-17 91.3 55 78.2
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 1.3e-16 90.9 63 73.0
Cpa.g.sc37.123 Carica papaya HOM05D008080 ORTHO05D010244 4.0e-10 69.3 67 61.2
Eucgr.D02545 Eucalyptus grandis HOM05D008080 ORTHO05D010244 7.5e-09 65.1 78 53.8
Sabra11G0132200 Salix brachista HOM05D008080 ORTHO05D010244 1.2e-06 57.8 100 42.0


User provided reference genes

Program Settings