Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001150 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 9.5e-52 206.5 97 100.0
CSS0047666 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.4e-42 175.3 97 84.5
CSS0018761 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.5e-41 172.6 97 82.5
CSS0042171 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.3e-40 169.5 94 84.0
CSS0035882 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.1e-39 166.4 92 81.5
CSS0002016 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.9e-39 165.6 92 81.5
CSS0025354 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.6e-38 162.5 92 80.4
CSS0009610 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.7e-38 161.8 97 79.4
CSS0046979 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.5e-36 156.0 92 80.4
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 7.3e-36 153.7 100 73.0
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 7.3e-36 153.7 100 73.0
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 7.3e-36 153.7 100 73.0
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.6e-35 152.5 100 72.0
Rhsim10G0179600 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.1e-34 149.8 95 72.6
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.8e-34 149.1 95 72.6
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.1e-34 148.3 95 71.6
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.5e-33 146.0 95 71.6
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 4.9e-32 141.0 95 68.4
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 6.4e-32 140.6 95 68.4
Rhsim12G0049700 Rhododendron simsii HOM05D007230 ORTHO05D004756 9.3e-31 136.7 95 66.3
Psat2g117040 Pisum sativum HOM05D007230 ORTHO05D004756 5.6e-28 127.5 95 61.1
Psat1g026880 Pisum sativum HOM05D007230 ORTHO05D004756 2.8e-27 125.2 95 61.1
Psat7g056280 Pisum sativum HOM05D007230 ORTHO05D004756 8.1e-27 123.6 95 60.0
Psat0ss2585g0560 Pisum sativum HOM05D007230 ORTHO05D004756 1.4e-26 122.9 95 58.9
Psat0ss1196g0040 Pisum sativum HOM05D007230 ORTHO05D004756 3.1e-26 121.7 95 58.9
Psat5g083840 Pisum sativum HOM05D007230 ORTHO05D004756 6.9e-26 120.6 95 57.9
MELO3C032792.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.8e-24 114.8 95 53.7
MELO3C030315.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.2e-23 111.7 99 55.6
CSS0041454 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 9.3e-23 110.2 83 56.6
MELO3C029660.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.6e-22 109.4 95 52.6
MELO3C031197.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.6e-22 107.8 95 51.6
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 4.6e-22 107.8 95 54.7
CSS0009938 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.9e-21 104.8 74 68.9
MELO3C031996.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.1e-21 104.4 115 47.0
MELO3C030814.2 Cucumis melo HOM05D007230 ORTHO05D004756 6.7e-21 104.0 95 50.5
MELO3C029711.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.3e-20 101.7 95 48.4
MELO3C029643.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.3e-20 101.3 96 52.1
Psat0s1792g0040 Pisum sativum HOM05D000659 ORTHO05D000505 4.3e-20 101.3 85 55.3
CSS0049413 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.8e-19 98.6 74 64.9
MELO3C031511.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.0e-18 94.7 81 53.1
MELO3C032119.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.0e-16 90.1 82 48.8
Psat5g096840 Pisum sativum HOM05D007230 ORTHO05D004756 4.9e-16 87.8 60 66.7
QL04p097278 Quercus lobata HOM05D000002 ORTHO05D000001 6.5e-16 87.4 95 45.3
QL08p048522 Quercus lobata HOM05D000002 ORTHO05D000001 6.5e-16 87.4 95 45.3
QL11p016059 Quercus lobata HOM05D000002 ORTHO05D000001 8.4e-16 87.0 95 45.3
MELO3C033490.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.9e-15 85.9 60 58.3
MELO3C030889.2 Cucumis melo HOM05D007230 ORTHO05D004756 9.3e-15 83.6 58 62.1
Psat5g096800 Pisum sativum HOM05D007230 ORTHO05D004756 9.3e-15 83.6 53 67.9
QL10p052423 Quercus lobata HOM05D000002 ORTHO05D000001 1.6e-14 82.8 95 43.2
Rhsim05G0139800 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.1e-14 82.4 54 64.8
MELO3C032600.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.8e-13 79.3 58 58.6
MELO3C033487.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.0e-13 78.6 117 38.5
QL02p069342 Quercus lobata HOM05D000002 ORTHO05D000001 3.0e-13 78.6 79 48.1
QL06p036226 Quercus lobata HOM05D000002 ORTHO05D000001 1.9e-12 75.9 101 41.6
QL09p045529 Quercus lobata HOM05D000002 ORTHO05D000001 1.9e-12 75.9 83 44.6
QL11p002299 Quercus lobata HOM05D000002 ORTHO05D000001 5.7e-12 74.3 101 39.6
PSO675G0495 Papaver somniferum HOM05D007230 ORTHO05D004756 1.3e-11 73.2 100 37.0
QL01p026368 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-11 73.2 101 38.6
QL04p089373 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-11 73.2 101 38.6
QL05p073015 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-11 73.2 101 38.6
MELO3C029746.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.6e-11 72.8 50 60.0
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-11 72.8 95 36.8
QL03p000720 Quercus lobata HOM05D000002 ORTHO05D000001 2.8e-11 72.0 101 40.6
Rhsim12G0018900 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.8e-11 72.0 45 71.1
QL11p048818 Quercus lobata HOM05D000002 ORTHO05D000001 3.7e-11 71.6 101 39.6
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 3.7e-11 71.6 95 36.8
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 4.8e-11 71.2 95 36.8
SHI18717 Sapria himalayana HOM05D007230 ORTHO05D004756 4.8e-11 71.2 95 36.8
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 4.8e-11 71.2 95 36.8
MELO3C029851.2 Cucumis melo HOM05D007230 ORTHO05D004756 8.2e-11 70.5 47 66.0
QL02p084387 Quercus lobata HOM05D000002 ORTHO05D000001 8.2e-11 70.5 100 39.0
CSS0004170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 1.1e-10 70.1 36 83.3
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 1.1e-10 70.1 95 35.8
PSO339G3339 Papaver somniferum HOM05D007230 ORTHO05D004756 1.8e-10 69.3 100 37.0
PSO478G2157 Papaver somniferum HOM05D007230 ORTHO05D004756 1.8e-10 69.3 100 35.0
MELO3C029164.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.4e-10 68.9 47 61.7
SHI31375 Sapria himalayana HOM05D007230 ORTHO05D004756 2.4e-10 68.9 95 35.8
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 6.9e-10 67.4 95 35.8
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.5e-09 66.2 65 50.8
Rhsim11G0119100 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.6e-09 65.5 41 75.6
SHI30625 Sapria himalayana HOM05D007230 ORTHO05D004756 3.4e-09 65.1 65 44.6
QL04p092122 Quercus lobata HOM05D000002 ORTHO05D000001 3.8e-08 61.6 79 39.2
SHI50483 Sapria himalayana HOM05D000002 ORTHO05D000001 6.5e-08 60.8 88 34.1
SHI02527 Sapria himalayana HOM05D007230 ORTHO05D004756 8.5e-08 60.5 91 34.1
PSO339G5468 Papaver somniferum HOM05D007230 ORTHO05D004756 1.4e-07 59.7 100 32.0
PSO832G0254 Papaver somniferum HOM05D007230 ORTHO05D004756 2.5e-07 58.9 92 35.9
Psat4g177800 Pisum sativum HOM05D007230 ORTHO05D004756 4.2e-07 58.2 41 61.0
MELO3C033139.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.5e-07 57.8 70 42.9
Psat1g072080 Pisum sativum HOM05D007230 ORTHO05D004756 5.5e-07 57.8 50 54.0
PSO144G0017 Papaver somniferum HOM05D007230 ORTHO05D004756 3.6e-06 55.1 92 31.5
TPR.G24908 Trifolium pratense HOM05D000030 ORTHO05D000031 7.9e-06 53.9 86 27.9


User provided reference genes

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